Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_D24
(940 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 126 6e-28
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 126 1e-27
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 95 2e-18
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 58 3e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 47 6e-04
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.040
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 40 0.069
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.091
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 36 2.0
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 35 3.4
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 6.0
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 33 7.9
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 126 bits (305), Expect = 6e-28
Identities = 60/71 (84%), Positives = 61/71 (85%)
Frame = +3
Query: 474 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 653
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 654 CRLPDTCPXXS 686
CRLPDTCP S
Sbjct: 62 CRLPDTCPPFS 72
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 126 bits (303), Expect = 1e-27
Identities = 73/120 (60%), Positives = 78/120 (65%)
Frame = +3
Query: 306 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 485
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 486 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRPCRLP 665
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RRFPL APSCALLF P LP
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLFLPFGLP 133
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 95.1 bits (226), Expect = 2e-18
Identities = 45/54 (83%), Positives = 47/54 (87%)
Frame = +3
Query: 492 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 653
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRRFPL APSCALLF P
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLFLP 97
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 482 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 369
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 282 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 449
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 58.0 bits (134), Expect = 3e-07
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 2/93 (2%)
Frame = +3
Query: 381 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 554
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 555 IDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 653
I Q + +T+ +YK T FPL++PS +LLF P
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLFPP 114
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 47.2 bits (107), Expect = 6e-04
Identities = 24/36 (66%), Positives = 25/36 (69%)
Frame = -1
Query: 673 QVSGKRQGRNRRAHEGASRGKRLVSL*SCRVSPPLT 566
QVSGKRQGRNRRAHEGA+ K SL PPLT
Sbjct: 64 QVSGKRQGRNRRAHEGAAGEKSPASLSPVGFRPPLT 99
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 401 HSKAVIRLSTESGDNAGKNM 460
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 41.1 bits (92), Expect = 0.040
Identities = 22/41 (53%), Positives = 26/41 (63%)
Frame = +1
Query: 208 INKLTTTIAFILCFRFRGEVWEVFSALMNRPTRGERRFAYW 330
+++LT L RF V +ALMNRPTRGERRFAYW
Sbjct: 1 MSELTHINCVALTARFPVGKPVVPAALMNRPTRGERRFAYW 41
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 40.3 bits (90), Expect = 0.069
Identities = 17/18 (94%), Positives = 17/18 (94%)
Frame = +3
Query: 87 PDXIRYIDEFGQTTTRMQ 140
PD IRYIDEFGQTTTRMQ
Sbjct: 347 PDMIRYIDEFGQTTTRMQ 364
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.091
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 352 ERGSGRAPNTQTASPRALADSLMQ 281
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 35.5 bits (78), Expect = 2.0
Identities = 20/37 (54%), Positives = 23/37 (62%)
Frame = +1
Query: 595 IKIPGVSPWKLPRALSCSDPAAYRIPVRLXRLAXPVS 705
+KI VS LP ALSCS+PA RIPV LA V+
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPPFSLAGSVA 68
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 34.7 bits (76), Expect = 3.4
Identities = 15/18 (83%), Positives = 16/18 (88%)
Frame = +2
Query: 632 VRSPVPTLPLTGYLSXXL 685
+RSPVPTLPLTGYLS L
Sbjct: 1 MRSPVPTLPLTGYLSAFL 18
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 6.0
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 491 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 369
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.5 bits (73), Expect = 7.9
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 242 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYXVWXQL 78
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 641,593,768
Number of Sequences: 1657284
Number of extensions: 12227793
Number of successful extensions: 33719
Number of sequences better than 10.0: 15
Number of HSP's better than 10.0 without gapping: 32435
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 33711
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86141029997
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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