Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_D22
         (892 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_08_0328 - 16805296-16806121,16806493-16807274                       32   0.70 
12_02_0217 + 15814303-15814905                                         31   1.2  
12_02_0030 + 12469707-12469902,12470337-12470658,12472208-124722...    29   3.8  
07_03_1479 - 26832976-26833095,26833737-26833943,26834104-268342...    29   5.0  
10_08_0327 + 16797366-16800639,16800979-16801067,16801120-16801593     29   6.6  
02_04_0636 - 24648288-24648740,24648902-24649049,24650165-24650703     29   6.6  
08_01_0656 + 5652383-5653009,5653260-5653736,5654969-5655289,565...    28   8.7  

>10_08_0328 - 16805296-16806121,16806493-16807274
          Length = 535

 Score = 31.9 bits (69), Expect = 0.70
 Identities = 22/49 (44%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
 Frame = +3

Query: 54  RAAQRDCARLPACNATAPTCGWGRVGPDATAGGVQRRRSAS-GLAAXTD 197
           +A+  D A L A    AP CGW  V  DA AG V R R  S GL    D
Sbjct: 39  KASLTDVAALSAWTRAAPVCGWRGVACDA-AGLVARLRLPSLGLRGGLD 86


>12_02_0217 + 15814303-15814905
          Length = 200

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 13/28 (46%), Positives = 16/28 (57%)
 Frame = +2

Query: 53  SGSAAGLCQATRVQRDRPNMWLGSRGPG 136
           +  AAG CQ  R +R    +WLGS G G
Sbjct: 166 AAGAAGFCQRRRRERRSATVWLGSSGRG 193


>12_02_0030 +
           12469707-12469902,12470337-12470658,12472208-12472245,
           12472486-12473573
          Length = 547

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 16/41 (39%), Positives = 20/41 (48%)
 Frame = +2

Query: 110 MWLGSRGPGCDGRRRPATSLGLWTGRAY*RDSPRRLATRQT 232
           +W G    G  GRRR A+S   W   A  R   RR A R++
Sbjct: 123 LWAGGAARGGFGRRRGASSTHAWRPGAGRRKGRRRAARRRS 163


>07_03_1479 - 26832976-26833095,26833737-26833943,26834104-26834252,
            26834330-26834732,26834840-26835118,26835285-26835716,
            26836362-26836838,26837171-26837212,26837285-26837545,
            26837637-26838938,26839146-26839575,26839643-26840046,
            26840360-26840716,26840842-26841102,26841494-26842141,
            26842231-26842452,26842547-26842768,26842860-26843009,
            26843739-26844111,26844467-26844689,26845167-26845425,
            26845585-26845920,26846013-26846999,26848395-26849624,
            26849706-26849768,26849858-26849910,26849998-26850079,
            26850520-26850588,26851070-26851129,26851205-26851267,
            26851993-26852101,26852742-26852827,26853120-26853847,
            26854613-26854676
          Length = 3716

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 19/60 (31%), Positives = 29/60 (48%)
 Frame = -2

Query: 231  VCLVASRRGESRQXARPVQRPSDVAGRRRPSHPGPRDPSHMLGRSRCTRVAWHSPAALPE 52
            + L++    + +Q  RP    + + G    SHP PR PS ++     T  AWH+  AL E
Sbjct: 2540 IALLSKDYHKRQQGCRPNVAQALLEGLHL-SHPQPRMPSELIKYIGKTCNAWHTSIALLE 2598


>10_08_0327 + 16797366-16800639,16800979-16801067,16801120-16801593
          Length = 1278

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 13/32 (40%), Positives = 15/32 (46%)
 Frame = +3

Query: 63  QRDCARLPACNATAPTCGWGRVGPDATAGGVQ 158
           Q   A L   +  AP C W  V  DA AGG +
Sbjct: 37  QDGAAALSGWSRAAPVCAWRGVACDAAAGGAR 68


>02_04_0636 - 24648288-24648740,24648902-24649049,24650165-24650703
          Length = 379

 Score = 28.7 bits (61), Expect = 6.6
 Identities = 22/76 (28%), Positives = 31/76 (40%)
 Frame = -3

Query: 317 SCLNIYLR*FVIYHIIQSSK*SPPLWICAFVWSRVVEASHVSXRGQSRGRATSLDAAGRR 138
           +CL+  +   V Y  +  ++ SPP  +CA  W R  +   V+    S G    L      
Sbjct: 271 ACLDPAMDVAVAYRGLALARASPPPRVCARGWGRTEQVPVVA----SSGNGVRLPG---- 322

Query: 137 IRAHATPATCWGGRVA 90
              H   A  WGG VA
Sbjct: 323 FALHGLEADAWGGAVA 338


>08_01_0656 +
           5652383-5653009,5653260-5653736,5654969-5655289,
           5655434-5655589,5656062-5656127,5656196-5656315
          Length = 588

 Score = 28.3 bits (60), Expect = 8.7
 Identities = 18/53 (33%), Positives = 21/53 (39%)
 Frame = -2

Query: 186 RPVQRPSDVAGRRRPSHPGPRDPSHMLGRSRCTRVAWHSPAALPECXXLKGFP 28
           R   RP+  A R+  S P P        RS C R  W +PA  P      G P
Sbjct: 9   RKPSRPAGAALRKTGSAPSPTRSCTTSCRS-CGRGRWRAPACSPAAGATSGPP 60


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,688,964
Number of Sequences: 37544
Number of extensions: 405547
Number of successful extensions: 1366
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 1312
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1366
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2506954360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)