Bombyx BLAST Result against mosquito

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_D22
         (892 letters)

Database: mosquito 
           2352 sequences; 563,979 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein ...    25   2.3  
AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcript...    25   2.3  
AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal...    25   4.1  

>CR954256-5|CAJ14146.1|  615|Anopheles gambiae predicted protein
           protein.
          Length = 615

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -2

Query: 570 TYSRLCQPCLKLRSIDISL 514
           +Y RLCQ C K   +DI L
Sbjct: 334 SYDRLCQQCHKALHLDIGL 352


>AB090813-2|BAC57902.1| 1099|Anopheles gambiae reverse transcriptase
            protein.
          Length = 1099

 Score = 25.4 bits (53), Expect = 2.3
 Identities = 14/30 (46%), Positives = 15/30 (50%)
 Frame = -2

Query: 213  RRGESRQXARPVQRPSDVAGRRRPSHPGPR 124
            RR  SR+ AR  QR    AGR     P PR
Sbjct: 1047 RRNASRRAARARQRELQRAGRPPSPPPSPR 1076


>AJ301655-1|CAC35008.1| 1433|Anopheles gambiae putative epidermal
           growth factor receptorprotein.
          Length = 1433

 Score = 24.6 bits (51), Expect = 4.1
 Identities = 11/41 (26%), Positives = 15/41 (36%)
 Frame = -3

Query: 224 WSRVVEASHVSXRGQSRGRATSLDAAGRRIRAHATPATCWG 102
           WS + ++S      Q    AT     G       + A CWG
Sbjct: 443 WSEIKKSSDHEVMVQKNRNATECHEEGMECSEQCSKAGCWG 483


  Database: mosquito
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 563,979
  Number of sequences in database:  2352
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 814,482
Number of Sequences: 2352
Number of extensions: 15783
Number of successful extensions: 27
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 27
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 27
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 95920632
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)