Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_D22
         (892 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical...    29   4.5  
AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical...    29   4.5  
AL132952-24|CAB61143.2|  351|Caenorhabditis elegans Hypothetical...    29   5.9  

>AL132876-33|CAI79187.1| 1133|Caenorhabditis elegans Hypothetical
           protein Y105E8A.26b protein.
          Length = 1133

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 258 IKSPIMDMRVCLVASRRGESRQXARPVQRPSDVAGRRRPSHPGPRDPSHMLGR 100
           +KS  +D +  L   + GE +  + P+Q P D+    R     PR   H LG+
Sbjct: 732 LKSEYVDYQDSL-PRKGGEKKWDSSPLQTPGDLPSEMREYSTMPRPQHHQLGQ 783


>AL132876-32|CAD56252.2| 1172|Caenorhabditis elegans Hypothetical
           protein Y105E8A.26a protein.
          Length = 1172

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 16/53 (30%), Positives = 25/53 (47%)
 Frame = -2

Query: 258 IKSPIMDMRVCLVASRRGESRQXARPVQRPSDVAGRRRPSHPGPRDPSHMLGR 100
           +KS  +D +  L   + GE +  + P+Q P D+    R     PR   H LG+
Sbjct: 732 LKSEYVDYQDSL-PRKGGEKKWDSSPLQTPGDLPSEMREYSTMPRPQHHQLGQ 783


>AL132952-24|CAB61143.2|  351|Caenorhabditis elegans Hypothetical
           protein Y51H4A.9 protein.
          Length = 351

 Score = 28.7 bits (61), Expect = 5.9
 Identities = 16/51 (31%), Positives = 23/51 (45%), Gaps = 2/51 (3%)
 Frame = +3

Query: 75  ARLPACNATAPTCGWGRVGPDATAG--GVQRRRSASGLAAXTDVTRLDDSR 221
           +R PA + +  +CG G VGP    G  G      +SG         +DDS+
Sbjct: 148 SRAPASSGSCCSCGVGAVGPPGAPGQDGAPGNDGSSGAPGHPGQDAVDDSQ 198


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,636,299
Number of Sequences: 27780
Number of extensions: 335472
Number of successful extensions: 826
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 797
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 826
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2255353870
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)