Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_D19
(902 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6; Metazoa... 66 2e-09
UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72; Fungi/... 62 2e-08
UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4; Bilater... 48 4e-04
UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3; ... 46 0.001
UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10; Eurya... 44 0.004
UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10... 44 0.007
UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13... 44 0.007
UniRef50_O22165 Cluster: Probable ribosome biogenesis protein RL... 43 0.009
UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein RL... 42 0.016
UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2; Cryptos... 41 0.038
UniRef50_Q0ULI2 Cluster: Predicted protein; n=12; Pezizomycotina... 41 0.038
UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;... 41 0.038
UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1; ... 41 0.050
UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative... 39 0.20
UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella ve... 39 0.20
UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein RL... 39 0.20
UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN full... 38 0.27
UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=... 38 0.27
UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein RL... 38 0.27
UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila melanogaster|... 38 0.35
UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellul... 38 0.35
UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22; Viri... 38 0.46
UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2; ... 37 0.61
UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2; Deutero... 37 0.61
UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22; Fung... 37 0.61
UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia... 37 0.81
UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lambl... 36 1.1
UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1; ... 36 1.1
UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein RL... 36 1.1
UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyosteli... 36 1.4
UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, wh... 36 1.4
UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5; ... 35 2.5
UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4; Euroti... 35 2.5
UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11; Eurya... 35 2.5
UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2; Cryptospor... 35 3.3
UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes va... 34 4.3
UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;... 34 4.3
UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein RL... 34 5.7
UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=... 33 7.5
UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177, w... 33 7.5
>UniRef50_Q8JGR4 Cluster: 60S ribosomal protein L24; n=6;
Metazoa|Rep: 60S ribosomal protein L24 - Danio rerio
(Zebrafish) (Brachydanio rerio)
Length = 157
Score = 65.7 bits (153), Expect = 2e-09
Identities = 31/70 (44%), Positives = 42/70 (60%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQ 253
M + LC+ G K PGHG+ +VDGK F FLN+KCE+A L +RNPR N + + +
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARVDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 254 KGPRGRTSKE 283
KG SK+
Sbjct: 61 KGQSEEVSKK 70
Score = 33.1 bits (72), Expect = 10.0
Identities = 14/19 (73%), Positives = 17/19 (89%)
Frame = +1
Query: 319 IVGASLSDIMAKRNMKPEV 375
I GASL++I+AKRN KPEV
Sbjct: 82 ITGASLAEILAKRNQKPEV 100
>UniRef50_P83731 Cluster: 60S ribosomal protein L24; n=72;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24 -
Homo sapiens (Human)
Length = 157
Score = 62.1 bits (144), Expect = 2e-08
Identities = 29/70 (41%), Positives = 40/70 (57%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQ 253
M + LC+ G K PGHG+ + DGK F FLN+KCE+A L +RNPR N + + +
Sbjct: 1 MKVELCSFSGYKIYPGHGRRYARTDGKVFQFLNAKCESAFLSKRNPRQINWTVLYRRKHK 60
Query: 254 KGPRGRTSKE 283
KG K+
Sbjct: 61 KGQSEEIQKK 70
Score = 35.9 bits (79), Expect = 1.4
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +1
Query: 319 IVGASLSDIMAKRNMKPEV 375
I GASL+DIMAKRN KPEV
Sbjct: 82 ITGASLADIMAKRNQKPEV 100
>UniRef50_O01868 Cluster: 60S ribosomal protein L24; n=4;
Bilateria|Rep: 60S ribosomal protein L24 -
Caenorhabditis elegans
Length = 159
Score = 47.6 bits (108), Expect = 4e-04
Identities = 24/66 (36%), Positives = 33/66 (50%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQ 253
M + C G K PGHGK +V+ DGK FL+ K +RRNPR + + +
Sbjct: 1 MKVETCVYSGYKIHPGHGKRLVRTDGKVQIFLSGKALKGAKLRRNPRDIRWTVLYRIKNK 60
Query: 254 KGPRGR 271
KG G+
Sbjct: 61 KGTHGQ 66
>UniRef50_UPI000049899D Cluster: 60S ribosomal protein L24; n=3;
cellular organisms|Rep: 60S ribosomal protein L24 -
Entamoeba histolytica HM-1:IMSS
Length = 179
Score = 46.0 bits (104), Expect = 0.001
Identities = 20/47 (42%), Positives = 25/47 (53%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C G+ PGHG V+ D K F F SKC + M+RNPR
Sbjct: 1 MRIEKCYFCGANIYPGHGMMFVRNDAKVFWFCRSKCHKSFKMKRNPR 47
>UniRef50_P54064 Cluster: 50S ribosomal protein L24e; n=10;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanococcus jannaschii
Length = 70
Score = 44.4 bits (100), Expect = 0.004
Identities = 19/42 (45%), Positives = 26/42 (61%)
Frame = +2
Query: 89 CAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
C+ G + PG GK +V+ DG F +SKCE ++ M RNPR
Sbjct: 7 CSFCGYEIEPGKGKMVVEKDGTVLYFCSSKCEKSYRMGRNPR 48
>UniRef50_Q07915 Cluster: Ribosome biogenesis protein RLP24; n=10;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Saccharomyces cerevisiae (Baker's yeast)
Length = 199
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C S PGHG V+ D K F F SKC A RRNPR
Sbjct: 1 MRIYQCHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPR 47
>UniRef50_Q6CNW3 Cluster: Ribosome biogenesis protein RLP24; n=13;
Ascomycota|Rep: Ribosome biogenesis protein RLP24 -
Kluyveromyces lactis (Yeast) (Candida sphaerica)
Length = 198
Score = 43.6 bits (98), Expect = 0.007
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C S PGHG V+ D K F F SKC A RRNPR
Sbjct: 1 MRVYACHFCSSPCYPGHGIMFVRNDAKEFRFCRSKCHKAFKQRRNPR 47
>UniRef50_O22165 Cluster: Probable ribosome biogenesis protein
RLP24; n=3; core eudicotyledons|Rep: Probable ribosome
biogenesis protein RLP24 - Arabidopsis thaliana
(Mouse-ear cress)
Length = 159
Score = 43.2 bits (97), Expect = 0.009
Identities = 21/47 (44%), Positives = 23/47 (48%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M L C S PGHG V+ D K F F SKC M+RNPR
Sbjct: 1 MRLEKCWFCSSTIYPGHGIQFVRNDAKIFRFCRSKCHKNFKMKRNPR 47
>UniRef50_Q9VGN9 Cluster: Probable ribosome biogenesis protein
RLP24; n=10; Coelomata|Rep: Probable ribosome biogenesis
protein RLP24 - Drosophila melanogaster (Fruit fly)
Length = 191
Score = 42.3 bits (95), Expect = 0.016
Identities = 19/47 (40%), Positives = 23/47 (48%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C SK PGHG V+ D K F F KC A ++NPR
Sbjct: 1 MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPR 47
>UniRef50_Q5CXQ6 Cluster: 60S ribosomal protein L24; n=2;
Cryptosporidium|Rep: 60S ribosomal protein L24 -
Cryptosporidium parvum Iowa II
Length = 202
Score = 41.1 bits (92), Expect = 0.038
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C S PGHG V+ D K F F SKC M+ NPR
Sbjct: 6 MRIEKCWYCSSNIYPGHGVTFVRNDAKIFRFCRSKCHRHFKMKHNPR 52
>UniRef50_Q0ULI2 Cluster: Predicted protein; n=12;
Pezizomycotina|Rep: Predicted protein - Phaeosphaeria
nodorum (Septoria nodorum)
Length = 161
Score = 41.1 bits (92), Expect = 0.038
Identities = 18/38 (47%), Positives = 22/38 (57%)
Frame = +2
Query: 101 GSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
G K PG GK ++ D K F F N K E+ L R+NPR
Sbjct: 10 GQKIYPGKGKLYIRGDSKIFRFQNGKTESLFLQRKNPR 47
>UniRef50_Q10353 Cluster: Ribosome biogenesis protein rlp24; n=2;
cellular organisms|Rep: Ribosome biogenesis protein
rlp24 - Schizosaccharomyces pombe (Fission yeast)
Length = 192
Score = 41.1 bits (92), Expect = 0.038
Identities = 19/47 (40%), Positives = 22/47 (46%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C PGHG V+ D K F F SKC M+RNPR
Sbjct: 1 MRVHTCYFCSGPVYPGHGIMFVRNDSKVFRFCRSKCHKNFKMKRNPR 47
>UniRef50_A2ENX8 Cluster: Ribosomal protein L24e, putative; n=1;
Trichomonas vaginalis G3|Rep: Ribosomal protein L24e,
putative - Trichomonas vaginalis G3
Length = 178
Score = 40.7 bits (91), Expect = 0.050
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 89 CAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
C+ G PGHG V+ D K F F SKC + ++NPR
Sbjct: 7 CSFCGGPIWPGHGTVYVRNDCKVFRFCKSKCRKFWMKKKNPR 48
>UniRef50_Q4UCL2 Cluster: 60S ribosomal protein L24/L30, putative;
n=2; Theileria|Rep: 60S ribosomal protein L24/L30,
putative - Theileria annulata
Length = 187
Score = 38.7 bits (86), Expect = 0.20
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C S PGHG V+ D K F F SKC + NPR
Sbjct: 1 MNINKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHRHFKAKHNPR 47
>UniRef50_A7T293 Cluster: Predicted protein; n=7; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 143
Score = 38.7 bits (86), Expect = 0.20
Identities = 19/44 (43%), Positives = 25/44 (56%)
Frame = +2
Query: 152 KTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQKGPRGRTSKE 283
K F FLN +CE A LMRRNPR + + +KG + SK+
Sbjct: 7 KVFNFLNKRCERALLMRRNPREVTWTVLYRCKHKKGTQEEVSKK 50
>UniRef50_Q86B05 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Eukaryota|Rep: Probable ribosome biogenesis
protein RLP24 - Dictyostelium discoideum (Slime mold)
Length = 164
Score = 38.7 bits (86), Expect = 0.20
Identities = 18/47 (38%), Positives = 22/47 (46%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C PGHG V+ D K F F SKC ++RNPR
Sbjct: 1 MRIEKCYFCSGPVYPGHGVMFVRNDCKQFRFCRSKCHKNFKLKRNPR 47
>UniRef50_Q3U5N8 Cluster: Bone marrow macrophage cDNA, RIKEN
full-length enriched library, clone:I830167A21
product:Similar to 60S ribosomal protein L30 isolog,
full insert sequence; n=3; Murinae|Rep: Bone marrow
macrophage cDNA, RIKEN full-length enriched library,
clone:I830167A21 product:Similar to 60S ribosomal
protein L30 isolog, full insert sequence - Mus musculus
(Mouse)
Length = 171
Score = 38.3 bits (85), Expect = 0.27
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C PGHG V+ D K F F SKC +RNPR
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPR 47
>UniRef50_A7AR75 Cluster: 60S ribosomal protein L24, putative; n=1;
Babesia bovis|Rep: 60S ribosomal protein L24, putative -
Babesia bovis
Length = 192
Score = 38.3 bits (85), Expect = 0.27
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C S PGHG V+ D K F F SKC + NPR
Sbjct: 1 MRIDKCWLCSSNIYPGHGIVFVRNDSKIFRFCRSKCHKHFKAKHNPR 47
>UniRef50_Q9UHA3 Cluster: Probable ribosome biogenesis protein
RLP24; n=35; Euteleostomi|Rep: Probable ribosome
biogenesis protein RLP24 - Homo sapiens (Human)
Length = 163
Score = 38.3 bits (85), Expect = 0.27
Identities = 18/47 (38%), Positives = 21/47 (44%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C PGHG V+ D K F F SKC +RNPR
Sbjct: 1 MRIEKCYFCSGPIYPGHGMMFVRNDCKVFRFCKSKCHKNFKKKRNPR 47
>UniRef50_Q8SY98 Cluster: RH14088p; n=1; Drosophila
melanogaster|Rep: RH14088p - Drosophila melanogaster
(Fruit fly)
Length = 123
Score = 37.9 bits (84), Expect = 0.35
Identities = 16/19 (84%), Positives = 17/19 (89%)
Frame = +3
Query: 216 KVTWTVLYRRKFKKGQEEE 272
KVTWTVLYRRK +KG EEE
Sbjct: 7 KVTWTVLYRRKHRKGIEEE 25
Score = 36.7 bits (81), Expect = 0.81
Identities = 16/19 (84%), Positives = 19/19 (100%)
Frame = +1
Query: 319 IVGASLSDIMAKRNMKPEV 375
IVGASL++I+AKRNMKPEV
Sbjct: 41 IVGASLAEILAKRNMKPEV 59
>UniRef50_O29492 Cluster: 50S ribosomal protein L24e; n=7; cellular
organisms|Rep: 50S ribosomal protein L24e -
Archaeoglobus fulgidus
Length = 58
Score = 37.9 bits (84), Expect = 0.35
Identities = 18/44 (40%), Positives = 25/44 (56%), Gaps = 1/44 (2%)
Frame = +2
Query: 86 LCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHL-MRRNPR 214
+C+ G PG GK V+ DG+ F F + KCE L ++R PR
Sbjct: 5 VCSFCGYDIEPGTGKMYVRRDGRVFYFCSGKCEKNMLKLKRKPR 48
>UniRef50_Q42347 Cluster: 60S ribosomal protein L24-1; n=22;
Viridiplantae|Rep: 60S ribosomal protein L24-1 -
Arabidopsis thaliana (Mouse-ear cress)
Length = 164
Score = 37.5 bits (83), Expect = 0.46
Identities = 15/33 (45%), Positives = 19/33 (57%)
Frame = +2
Query: 86 LCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCE 184
LC G K PG G ++ D + F FLNSKC+
Sbjct: 7 LCRFSGQKIYPGRGIRFIRSDSQVFLFLNSKCK 39
>UniRef50_UPI000049842E Cluster: 60S ribosomal protein L24; n=2;
Entamoeba histolytica HM-1:IMSS|Rep: 60S ribosomal
protein L24 - Entamoeba histolytica HM-1:IMSS
Length = 163
Score = 37.1 bits (82), Expect = 0.61
Identities = 17/43 (39%), Positives = 24/43 (55%)
Frame = +2
Query: 86 LCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
+CA G K G+ V++D K+FTF+N K L + NPR
Sbjct: 7 VCAFSGFKIPVAKGRKYVRLDLKSFTFINKKSLMQFLRKTNPR 49
>UniRef50_Q6JWX2 Cluster: 60S ribosomal protein L24; n=2;
Deuterostomia|Rep: 60S ribosomal protein L24 -
Oikopleura dioica (Tunicate)
Length = 165
Score = 37.1 bits (82), Expect = 0.61
Identities = 16/47 (34%), Positives = 22/47 (46%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C + PGHG V+ D K F F +KC ++NPR
Sbjct: 1 MRVEKCYFCSAPVYPGHGTVFVRNDSKQFRFCTAKCNKMFKKKKNPR 47
>UniRef50_P24000 Cluster: 60S ribosomal protein L24-B; n=22;
Fungi/Metazoa group|Rep: 60S ribosomal protein L24-B -
Saccharomyces cerevisiae (Baker's yeast)
Length = 155
Score = 37.1 bits (82), Expect = 0.61
Identities = 17/38 (44%), Positives = 21/38 (55%)
Frame = +2
Query: 101 GSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
G+K PG G V+ D K F F NSK + R+NPR
Sbjct: 10 GAKIYPGRGTLFVRGDSKIFRFQNSKSASLFKQRKNPR 47
>UniRef50_Q7QRA3 Cluster: GLP_2_13062_12754; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_2_13062_12754 - Giardia lamblia ATCC
50803
Length = 102
Score = 36.7 bits (81), Expect = 0.81
Identities = 17/42 (40%), Positives = 22/42 (52%)
Frame = +2
Query: 89 CAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
C+ G K PG+GK M + D FLN K +L + NPR
Sbjct: 7 CSYSGRKILPGYGKRMSRHDKVLLIFLNRKASVHYLNKWNPR 48
>UniRef50_Q7R0M0 Cluster: GLP_154_26137_25568; n=1; Giardia lamblia
ATCC 50803|Rep: GLP_154_26137_25568 - Giardia lamblia
ATCC 50803
Length = 189
Score = 36.3 bits (80), Expect = 1.1
Identities = 16/42 (38%), Positives = 20/42 (47%)
Frame = +2
Query: 89 CAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
C+ PG G V+ D + F F SKC M+RNPR
Sbjct: 7 CSFCSKPVYPGKGICFVRNDSRVFRFCTSKCHRNFKMKRNPR 48
>UniRef50_Q4P385 Cluster: Putative uncharacterized protein; n=1;
Ustilago maydis|Rep: Putative uncharacterized protein -
Ustilago maydis (Smut fungus)
Length = 181
Score = 36.3 bits (80), Expect = 1.1
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C + PG G V+ D K F F SKC ++RNPR
Sbjct: 1 MRIEHCFFCSAPCYPGKGITFVRNDAKIFKFCKSKCHKNFKLKRNPR 47
>UniRef50_Q17606 Cluster: Probable ribosome biogenesis protein
RLP24; n=2; Caenorhabditis|Rep: Probable ribosome
biogenesis protein RLP24 - Caenorhabditis elegans
Length = 162
Score = 36.3 bits (80), Expect = 1.1
Identities = 16/47 (34%), Positives = 21/47 (44%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C S PGHG V+ D F F S+C ++NPR
Sbjct: 1 MRIEKCYFCSSPIYPGHGIQFVRNDSTVFKFCRSRCNKLFKKKKNPR 47
>UniRef50_Q54VN6 Cluster: Ribosomal protein L24; n=1; Dictyostelium
discoideum AX4|Rep: Ribosomal protein L24 -
Dictyostelium discoideum AX4
Length = 127
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/47 (36%), Positives = 22/47 (46%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M LC K P G V+ D K F F+N+K E+ + NPR
Sbjct: 1 MKTSLCNYSEFKIYPARGMKFVRGDSKVFHFINTKVESLFFRKINPR 47
>UniRef50_A0DJ05 Cluster: Chromosome undetermined scaffold_52, whole
genome shotgun sequence; n=4; Eukaryota|Rep: Chromosome
undetermined scaffold_52, whole genome shotgun sequence
- Paramecium tetraurelia
Length = 171
Score = 35.9 bits (79), Expect = 1.4
Identities = 17/47 (36%), Positives = 20/47 (42%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C PGHG V+ D K F F SKC + NPR
Sbjct: 1 MRIEKCYFCSGPIYPGHGIVFVRNDSKMFRFCRSKCHRHFKAQHNPR 47
>UniRef50_Q7RRK8 Cluster: Ribosomal protein L24e, putative; n=5;
Plasmodium|Rep: Ribosomal protein L24e, putative -
Plasmodium yoelii yoelii
Length = 213
Score = 35.1 bits (77), Expect = 2.5
Identities = 15/47 (31%), Positives = 20/47 (42%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C PGHG ++ D + F F SKC + NPR
Sbjct: 1 MRIEKCWYCSGNIYPGHGIHFIRNDARVFRFCRSKCHKHFKAKHNPR 47
>UniRef50_A1CYX3 Cluster: 60S ribosomal protein L24b; n=4;
Eurotiomycetidae|Rep: 60S ribosomal protein L24b -
Neosartorya fischeri (strain ATCC 1020 / DSM 3700 / NRRL
181)(Aspergillus fischerianus (strain ATCC 1020 / DSM
3700 / NRRL 181))
Length = 188
Score = 35.1 bits (77), Expect = 2.5
Identities = 17/47 (36%), Positives = 21/47 (44%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C P G V+ D K+F F SKC A M+R PR
Sbjct: 1 MRVETCHFCSRPVYPSKGITFVRNDAKSFRFCRSKCHANFKMKRQPR 47
>UniRef50_Q8PU76 Cluster: 50S ribosomal protein L24e; n=11;
Euryarchaeota|Rep: 50S ribosomal protein L24e -
Methanosarcina mazei (Methanosarcina frisia)
Length = 62
Score = 35.1 bits (77), Expect = 2.5
Identities = 16/42 (38%), Positives = 21/42 (50%)
Frame = +2
Query: 89 CAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
C G PG GK +K DG T+ +SKC + + R PR
Sbjct: 6 CYFCGQMLEPGTGKLYIKKDGSTYFMCSSKCMSNFALGRLPR 47
>UniRef50_Q5CFK2 Cluster: Ribosomal protein L24e; n=2;
Cryptosporidium|Rep: Ribosomal protein L24e -
Cryptosporidium hominis
Length = 133
Score = 34.7 bits (76), Expect = 3.3
Identities = 15/42 (35%), Positives = 21/42 (50%)
Frame = +2
Query: 86 LCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNP 211
LC+ + PG G+ V DG+ TFLN KC + + P
Sbjct: 12 LCSYSEYRIYPGRGRKFVARDGRVSTFLNQKCASLFHQKIRP 53
>UniRef50_Q6A1N0 Cluster: Ribosomal protein L24; n=1; Euplotes
vannus|Rep: Ribosomal protein L24 - Euplotes vannus
Length = 155
Score = 34.3 bits (75), Expect = 4.3
Identities = 15/39 (38%), Positives = 20/39 (51%)
Frame = +2
Query: 86 LCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMR 202
LC K PG G V+ DG+TF FL+ K + H +
Sbjct: 7 LCHFSEYKVYPGRGHRFVRKDGRTFFFLSRKTRSLHFQK 45
>UniRef50_A6RB37 Cluster: Ribosome biogenesis protein RLP24; n=1;
Ajellomyces capsulatus NAm1|Rep: Ribosome biogenesis
protein RLP24 - Ajellomyces capsulatus NAm1
Length = 191
Score = 34.3 bits (75), Expect = 4.3
Identities = 16/47 (34%), Positives = 20/47 (42%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C P G V+ D +TF F SKC M+R PR
Sbjct: 1 MRIETCHFCSQPCYPSKGITFVRNDARTFRFCRSKCHKNFKMKRQPR 47
>UniRef50_Q8SSF6 Cluster: Probable ribosome biogenesis protein
RLP24; n=1; Encephalitozoon cuniculi|Rep: Probable
ribosome biogenesis protein RLP24 - Encephalitozoon
cuniculi
Length = 155
Score = 33.9 bits (74), Expect = 5.7
Identities = 17/47 (36%), Positives = 19/47 (40%)
Frame = +2
Query: 74 MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
M + C S GHG V+ D K F F KC R NPR
Sbjct: 1 MRIEKCWFCSSNIYQGHGTIYVRNDAKVFRFCRPKCRKLFARRVNPR 47
>UniRef50_Q4N0R3 Cluster: 60S ribosomal protein L24, putative; n=3;
Piroplasmida|Rep: 60S ribosomal protein L24, putative -
Theileria parva
Length = 159
Score = 33.5 bits (73), Expect = 7.5
Identities = 15/41 (36%), Positives = 19/41 (46%)
Frame = +2
Query: 89 CAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNP 211
C + PG GK V DGK + F+N K A H + P
Sbjct: 17 CNFTDYRVYPGRGKKFVARDGKVYFFINGKSAAFHKRKVKP 57
>UniRef50_A0CFQ8 Cluster: Chromosome undetermined scaffold_177,
whole genome shotgun sequence; n=7; Paramecium
tetraurelia|Rep: Chromosome undetermined scaffold_177,
whole genome shotgun sequence - Paramecium tetraurelia
Length = 162
Score = 33.5 bits (73), Expect = 7.5
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +2
Query: 86 LCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEA 187
LC+ + PGHG+ V DG+ F +LN K A
Sbjct: 7 LCSFSEWRIYPGHGRRFVAKDGRLFYYLNQKSRA 40
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 607,912,336
Number of Sequences: 1657284
Number of extensions: 8869861
Number of successful extensions: 13018
Number of sequences better than 10.0: 40
Number of HSP's better than 10.0 without gapping: 12783
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 13013
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 81981722200
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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