Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_D19
         (902 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p pro...    76   6e-14
AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA...    76   6e-14
AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p pro...    42   9e-04
AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA...    42   9e-04
AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p pro...    38   0.019

>AY071277-1|AAL48899.1|  155|Drosophila melanogaster RE30690p
           protein.
          Length = 155

 Score = 76.2 bits (179), Expect = 6e-14
 Identities = 35/70 (50%), Positives = 46/70 (65%)
 Frame = +2

Query: 74  MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQ 253
           M +GLCA  G K  PGHGK MVK+DGK+FTFL+ KCE ++LM+RNPR        + + +
Sbjct: 1   MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60

Query: 254 KGPRGRTSKE 283
           KG     SK+
Sbjct: 61  KGIEEEASKK 70



 Score = 36.7 bits (81), Expect = 0.043
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = +1

Query: 319 IVGASLSDIMAKRNMKPEV 375
           IVGASL++I+AKRNMKPEV
Sbjct: 82  IVGASLAEILAKRNMKPEV 100


>AE014134-2347|AAF53299.1|  155|Drosophila melanogaster CG9282-PA
           protein.
          Length = 155

 Score = 76.2 bits (179), Expect = 6e-14
 Identities = 35/70 (50%), Positives = 46/70 (65%)
 Frame = +2

Query: 74  MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR*SNMDCPVQAQVQ 253
           M +GLCA  G K  PGHGK MVK+DGK+FTFL+ KCE ++LM+RNPR        + + +
Sbjct: 1   MKIGLCAFSGYKIYPGHGKTMVKIDGKSFTFLDKKCERSYLMKRNPRKVTWTVLYRRKHR 60

Query: 254 KGPRGRTSKE 283
           KG     SK+
Sbjct: 61  KGIEEEASKK 70



 Score = 36.7 bits (81), Expect = 0.043
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = +1

Query: 319 IVGASLSDIMAKRNMKPEV 375
           IVGASL++I+AKRNMKPEV
Sbjct: 82  IVGASLAEILAKRNMKPEV 100


>AY113325-1|AAM29330.1|  191|Drosophila melanogaster AT28833p
           protein.
          Length = 191

 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +2

Query: 74  MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
           M +  C    SK  PGHG   V+ D K F F   KC  A   ++NPR
Sbjct: 1   MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPR 47


>AE014297-1297|AAF54637.1|  191|Drosophila melanogaster CG6764-PA
           protein.
          Length = 191

 Score = 42.3 bits (95), Expect = 9e-04
 Identities = 19/47 (40%), Positives = 23/47 (48%)
 Frame = +2

Query: 74  MXLGLCAXXGSKXXPGHGKPMVKVDGKTFTFLNSKCEAAHLMRRNPR 214
           M +  C    SK  PGHG   V+ D K F F   KC  A   ++NPR
Sbjct: 1   MRIQTCYFCSSKIYPGHGVQFVRNDCKVFKFCRGKCHKAFKRKKNPR 47


>AY071693-1|AAL49315.1|  123|Drosophila melanogaster RH14088p
           protein.
          Length = 123

 Score = 37.9 bits (84), Expect = 0.019
 Identities = 16/19 (84%), Positives = 17/19 (89%)
 Frame = +3

Query: 216 KVTWTVLYRRKFKKGQEEE 272
           KVTWTVLYRRK +KG EEE
Sbjct: 7   KVTWTVLYRRKHRKGIEEE 25



 Score = 36.7 bits (81), Expect = 0.043
 Identities = 16/19 (84%), Positives = 19/19 (100%)
 Frame = +1

Query: 319 IVGASLSDIMAKRNMKPEV 375
           IVGASL++I+AKRNMKPEV
Sbjct: 41  IVGASLAEILAKRNMKPEV 59


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 27,762,988
Number of Sequences: 53049
Number of extensions: 423523
Number of successful extensions: 697
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 684
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 695
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4403028645
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)