Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_D18
(910 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical pr... 34 0.16
AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical ... 34 0.16
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 33 0.21
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 33 0.21
AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily a... 32 0.49
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 32 0.65
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 32 0.65
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 32 0.65
AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical... 32 0.65
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 31 1.1
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 31 1.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 25 1.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 25 1.8
Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical pr... 30 2.0
U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog (hed... 30 2.0
U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (gr... 30 2.0
U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (gr... 30 2.0
U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical pr... 30 2.0
U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical pr... 30 2.0
AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical ... 30 2.0
AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical ... 30 2.0
Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical pr... 30 2.6
U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily as... 30 2.6
AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical ... 30 2.6
Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical pr... 25 3.1
Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical pr... 29 3.5
Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical pr... 29 3.5
U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical pr... 29 3.5
U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set (trithorax/... 29 3.5
U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set (trithorax/... 29 3.5
AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical ... 29 3.5
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 3.5
Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical pr... 29 4.6
Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical pr... 29 4.6
U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical pr... 29 4.6
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 29 6.1
AL023844-8|CAA19534.1| 396|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z68338-7|CAA92756.2| 866|Caenorhabditis elegans Hypothetical
protein T24B8.4 protein.
Length = 866
Score = 33.9 bits (74), Expect = 0.16
Identities = 15/42 (35%), Positives = 15/42 (35%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
G G PPPPP PPPP PPPP
Sbjct: 79 GPGGIPPPPPMFAGGIPPPPPMMGGIPPPPPMFGAPPPPPPP 120
>AF039052-9|AAF98625.1| 302|Caenorhabditis elegans Hypothetical
protein T22D1.2 protein.
Length = 302
Score = 33.9 bits (74), Expect = 0.16
Identities = 14/42 (33%), Positives = 16/42 (38%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
G PPPPP PPPP ++PPPP
Sbjct: 58 GNASRRPPPPPKGTGTPPPPPTGEPQDLSAEEGNASRRPPPP 99
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
G PPPPP PPPP + PPPP
Sbjct: 90 GNASRRPPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPP 131
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
G PPPPP PPPP + PPPP
Sbjct: 121 GNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPP 162
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
G PPPPP PPPP + PPPP
Sbjct: 152 GNASRRPPPPPKGTGSPPPPPTGEPQDLSTEGNASRRPPPPP 193
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
G PPPPP PPPP + PPPP
Sbjct: 183 GNASRRPPPPPKGTGTPPPPPTGEPQDLSAEGYASRRPPPPP 224
Score = 32.7 bits (71), Expect = 0.37
Identities = 14/42 (33%), Positives = 15/42 (35%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
G PPPPP PPPP + PPPP
Sbjct: 245 GNASRRPPPPPKGTGSPPPPPTGEPQDLSGEGNASRRPPPPP 286
Score = 32.3 bits (70), Expect = 0.49
Identities = 13/36 (36%), Positives = 14/36 (38%)
Frame = -2
Query: 579 PPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
PPPPP PPPP + PPPP
Sbjct: 33 PPPPPKGTGTPPPPPTGEPQDLSGEGNASRRPPPPP 68
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/42 (30%), Positives = 14/42 (33%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
G PPPPP P PP + PPPP
Sbjct: 214 GYASRRPPPPPKGTGSPTPPPTGEPQDLSGEGNASRRPPPPP 255
Score = 28.7 bits (61), Expect = 6.1
Identities = 13/37 (35%), Positives = 15/37 (40%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
PPPPP PPPP ++PPPP
Sbjct: 33 PPPPPKGTGTPPPPP--TGEPQDLSGEGNASRRPPPP 67
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 579 PPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXPHXNXGGGXKKGG 400
PPPPP PPPP PPPP G P G GG
Sbjct: 287 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 346
Query: 399 XFXP 388
P
Sbjct: 347 MPPP 350
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Frame = -2
Query: 597 GXXGXPPPPPPXKK----XXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
G G PPPPPP + PPPP + +PP P
Sbjct: 329 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 374
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXP 436
G PPPPP PPPP PPP GG P
Sbjct: 282 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 335
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 33.5 bits (73), Expect = 0.21
Identities = 19/64 (29%), Positives = 19/64 (29%)
Frame = -2
Query: 579 PPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXPHXNXGGGXKKGG 400
PPPPP PPPP PPPP G P G GG
Sbjct: 297 PPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPGG 356
Query: 399 XFXP 388
P
Sbjct: 357 MPPP 360
Score = 31.9 bits (69), Expect = 0.65
Identities = 15/46 (32%), Positives = 18/46 (39%), Gaps = 4/46 (8%)
Frame = -2
Query: 597 GXXGXPPPPPPXKK----XXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
G G PPPPPP + PPPP + +PP P
Sbjct: 339 GMGGMPPPPPPGMRYPGGMPPPPPPRYPSAGPGMYPPPPPSRPPAP 384
Score = 31.5 bits (68), Expect = 0.86
Identities = 16/54 (29%), Positives = 16/54 (29%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXP 436
G PPPPP PPPP PPP GG P
Sbjct: 292 GMTPRPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPP 345
>AF106580-3|AAC78205.1| 881|Caenorhabditis elegans Temporarily
assigned gene nameprotein 268 protein.
Length = 881
Score = 32.3 bits (70), Expect = 0.49
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP K PPPP
Sbjct: 88 PPPPPPTLKAPPPPP 102
Score = 29.9 bits (64), Expect = 2.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 87 PPPPPPPTLKAPPPP 101
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPP 538
G PPPPPP PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPP 772
Score = 31.5 bits (68), Expect = 0.86
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPP 538
G PPPPPP PPPP
Sbjct: 757 GPPPPPPPPGGCPPPPP 773
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -2
Query: 588 GXPPPP--PPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXPHXNXGGG 415
G PPPP PP PPPP PPPP GG P GG
Sbjct: 712 GPPPPPGLPPITGGPPPPP----PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 760 PPPPPPGGCPPPPPP 774
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -2
Query: 597 GXXGXPPPPPPXK-KXXPPPP 538
G PPPPPP K PPPP
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPP 787
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPP 538
G PPPPPP PPPP
Sbjct: 756 GGPPPPPPPPGGCPPPP 772
Score = 31.5 bits (68), Expect = 0.86
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPP 538
G PPPPPP PPPP
Sbjct: 757 GPPPPPPPPGGCPPPPP 773
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -2
Query: 588 GXPPPP--PPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXPHXNXGGG 415
G PPPP PP PPPP PPPP GG P GG
Sbjct: 712 GPPPPPGLPPITGGPPPPP----PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 767
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 760 PPPPPPGGCPPPPPP 774
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -2
Query: 597 GXXGXPPPPPPXK-KXXPPPP 538
G PPPPPP K PPPP
Sbjct: 767 GCPPPPPPPPPGGFKGGPPPP 787
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 31.9 bits (69), Expect = 0.65
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPP 538
G PPPPPP PPPP
Sbjct: 339 GGPPPPPPPPGGCPPPP 355
Score = 31.5 bits (68), Expect = 0.86
Identities = 11/17 (64%), Positives = 11/17 (64%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPP 538
G PPPPPP PPPP
Sbjct: 340 GPPPPPPPPGGCPPPPP 356
Score = 30.7 bits (66), Expect = 1.5
Identities = 20/60 (33%), Positives = 20/60 (33%), Gaps = 2/60 (3%)
Frame = -2
Query: 588 GXPPPP--PPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXPHXNXGGG 415
G PPPP PP PPPP PPPP GG P GG
Sbjct: 295 GPPPPPGLPPITGGPPPPP----PPGGLPPITGGPPPPPPPGGLPPISGGPPPPPPPPGG 350
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 343 PPPPPPGGCPPPPPP 357
Score = 28.3 bits (60), Expect = 8.0
Identities = 12/21 (57%), Positives = 12/21 (57%), Gaps = 1/21 (4%)
Frame = -2
Query: 597 GXXGXPPPPPPXK-KXXPPPP 538
G PPPPPP K PPPP
Sbjct: 350 GCPPPPPPPPPGGFKGGPPPP 370
>AF003151-19|AAK18922.1| 988|Caenorhabditis elegans Hypothetical
protein D1007.7 protein.
Length = 988
Score = 31.9 bits (69), Expect = 0.65
Identities = 22/74 (29%), Positives = 22/74 (29%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXPHXNXGG 418
G G PP PPP PPP KPPPP GA P G
Sbjct: 711 GIPGYPPAPPPPGVGPPPP-------QGIPPMGFDPNKPPPPMFQQGFNAGAPPPPFGRG 763
Query: 417 GXKKGGXFXPXXGG 376
P GG
Sbjct: 764 AGPMSSFPPPPRGG 777
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXPHXNXGGGXK 409
G PPPPP PPPP PPPP G+ P GG
Sbjct: 270 GSPPPPPTGSP--PPPPA-----GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 322
Query: 408 KGGXFXP 388
G P
Sbjct: 323 PAGTGSP 329
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXPHXNXGGGXK 409
G PPPPP PPPP PPPP G+ P GG
Sbjct: 291 GSPPPPPTGSP--PPPPA-----GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 343
Query: 408 KGGXFXP 388
G P
Sbjct: 344 PAGTGSP 350
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 31.1 bits (67), Expect = 1.1
Identities = 20/67 (29%), Positives = 21/67 (31%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXPHXNXGGGXK 409
G PPPPP PPPP PPPP G+ P GG
Sbjct: 276 GSPPPPPTGSP--PPPPA-----GGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPP 328
Query: 408 KGGXFXP 388
G P
Sbjct: 329 PAGTGSP 335
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 25.0 bits (52), Expect(2) = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 302 PPPPPP----PPPPP 312
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 483 PPPPXXXXKKKGGAXPHXNXGGG 415
PPPP GG + GGG
Sbjct: 309 PPPPAPAPVSSGGGYSEQSSGGG 331
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 25.0 bits (52), Expect(2) = 1.8
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 302 PPPPPP----PPPPP 312
Score = 23.8 bits (49), Expect(2) = 1.8
Identities = 9/23 (39%), Positives = 10/23 (43%)
Frame = -2
Query: 483 PPPPXXXXKKKGGAXPHXNXGGG 415
PPPP GG + GGG
Sbjct: 309 PPPPAPAPVSSGGGYSEQSSGGG 331
>Z98866-8|CAB11562.2| 425|Caenorhabditis elegans Hypothetical
protein Y49E10.10 protein.
Length = 425
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -2
Query: 576 PPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKK 454
PPPP K PPP K K PPP K+
Sbjct: 175 PPPPTTKAPPPPTTKAPPPPTTKAPPPPTTKAPPPPTTNKE 215
>U41543-12|AAZ91345.1| 401|Caenorhabditis elegans Groundhog
(hedgehog-like family)protein 7 protein.
Length = 401
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 132 PPPPPPPPHYPPPPP 146
>U40799-6|AAA81484.2| 210|Caenorhabditis elegans Ground-like (grd
related) protein 4 protein.
Length = 210
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 64 PPPPPPPPPMCPPPP 78
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 65 PPPPPPPPMCPPPPP 79
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 66 PPPPPPPMCPPPPPP 80
>U39852-7|AAK39260.1| 240|Caenorhabditis elegans Ground-like (grd
related) protein 6 protein.
Length = 240
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 72 PPPPPPPMPCPPPPP 86
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 73 PPPPPPMPCPPPPPP 87
>U23515-9|AAP82644.1| 360|Caenorhabditis elegans Hypothetical
protein R144.4a protein.
Length = 360
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 2 PPPPPPPPPPPPPPP 16
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 3 PPPPPPPPPPPPPPP 17
>U23515-8|AAP82645.1| 362|Caenorhabditis elegans Hypothetical
protein R144.4b protein.
Length = 362
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 2 PPPPPPPPPPPPPPP 16
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 3 PPPPPPPPPPPPPPP 17
>AC024838-7|AAF60820.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.2 protein.
Length = 381
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 184 PPPPPPIPPPGPPPP 198
>AC024838-3|AAF60821.1| 381|Caenorhabditis elegans Hypothetical
protein Y59E9AL.3 protein.
Length = 381
Score = 30.3 bits (65), Expect = 2.0
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 184 PPPPPPIPPPGPPPP 198
>Z93393-1|CAB07688.1| 497|Caenorhabditis elegans Hypothetical
protein Y48E1B.1 protein.
Length = 497
Score = 29.9 bits (64), Expect = 2.6
Identities = 13/37 (35%), Positives = 13/37 (35%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
PPPPPP K P P PPPP
Sbjct: 324 PPPPPPMKLDPSPQPAATPVEITEIPPIISPPAPPPP 360
>U40797-15|AAB37553.2| 1004|Caenorhabditis elegans Temporarily
assigned gene nameprotein 77 protein.
Length = 1004
Score = 29.9 bits (64), Expect = 2.6
Identities = 9/17 (52%), Positives = 12/17 (70%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPPXK 532
PPPPP ++ PPPP +
Sbjct: 20 PPPPPSPRRAPPPPPHR 36
>AC024798-8|AAK29921.3| 1115|Caenorhabditis elegans Hypothetical
protein Y48G9A.4 protein.
Length = 1115
Score = 29.9 bits (64), Expect = 2.6
Identities = 11/20 (55%), Positives = 11/20 (55%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPPP 538
G PPPPPP PPPP
Sbjct: 574 GAPPPPPPPPPMLGGPPPPP 593
Score = 28.7 bits (61), Expect = 6.1
Identities = 15/48 (31%), Positives = 16/48 (33%)
Frame = -2
Query: 579 PPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXP 436
P PPP PPPP PPPP + GA P
Sbjct: 533 PAPPPVSSIPPPPPIAGLLAANGTNVPI---PPPPPPPLPQNLSGAPP 577
>Z81592-1|CAB04725.1| 695|Caenorhabditis elegans Hypothetical
protein T16G1.1 protein.
Length = 695
Score = 24.6 bits (51), Expect(2) = 3.1
Identities = 9/25 (36%), Positives = 13/25 (52%)
Frame = -2
Query: 480 PPPXXXXKKKGGAXPHXNXGGGXKK 406
PPP + GA + N GGG ++
Sbjct: 534 PPPPPPPPRSSGANGNRNGGGGNRR 558
Score = 23.4 bits (48), Expect(2) = 3.1
Identities = 7/10 (70%), Positives = 8/10 (80%)
Frame = -2
Query: 588 GXPPPPPPXK 559
G PPPPPP +
Sbjct: 533 GPPPPPPPPR 542
>Z48367-5|CAE54886.1| 993|Caenorhabditis elegans Hypothetical
protein C33B4.3b protein.
Length = 993
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXP 436
PPPPPP PPP + PPPP GA P
Sbjct: 765 PPPPPP----PPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPP 809
>Z48367-4|CAA88324.1| 1110|Caenorhabditis elegans Hypothetical
protein C33B4.3a protein.
Length = 1110
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/49 (32%), Positives = 17/49 (34%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXP 436
PPPPPP PPP + PPPP GA P
Sbjct: 765 PPPPPP----PPPPHCEPTMVHVEFTPPSTSSVPPPPPPLPPISSGAPP 809
>U41538-2|AAG00010.1| 997|Caenorhabditis elegans Hypothetical
protein R04E5.8a protein.
Length = 997
Score = 29.5 bits (63), Expect = 3.5
Identities = 13/39 (33%), Positives = 16/39 (41%), Gaps = 2/39 (5%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPP--PP 472
PPPPPP + PPP ++PP PP
Sbjct: 138 PPPPPPPRVPRTPPPRSPPPRRPPMTPPSPQRRPPRTPP 176
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/19 (52%), Positives = 10/19 (52%)
Frame = -2
Query: 597 GXXGXPPPPPPXKKXXPPP 541
G PPPPPP PPP
Sbjct: 134 GGSSPPPPPPPRVPRTPPP 152
>U13875-4|AAK67215.1| 1510|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
c protein.
Length = 1510
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
P PPPP K+ PPPP
Sbjct: 296 PIPPPPIKEESPPPP 310
>U13875-3|AAK67214.1| 1507|Caenorhabditis elegans Set
(trithorax/polycomb) domaincontaining protein 2, isoform
a protein.
Length = 1507
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 11/15 (73%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
P PPPP K+ PPPP
Sbjct: 296 PIPPPPIKEESPPPP 310
>AL034392-5|CAE17989.1| 134|Caenorhabditis elegans Hypothetical
protein Y40B1A.5 protein.
Length = 134
Score = 29.5 bits (63), Expect = 3.5
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPPP PPPP
Sbjct: 95 PPPPPPHYYTQPPPP 109
Score = 28.3 bits (60), Expect = 8.0
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPP 538
G PPPPP PPPP
Sbjct: 94 GPPPPPPHYYTQPPPPP 110
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.5 bits (63), Expect = 3.5
Identities = 14/38 (36%), Positives = 14/38 (36%), Gaps = 1/38 (2%)
Frame = -2
Query: 582 PPPPPPXKKXXP-PPPXKXXXXXXXXXXXXXXKKPPPP 472
PPPPPP P PPP PPPP
Sbjct: 1343 PPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPP 1380
Score = 29.1 bits (62), Expect = 4.6
Identities = 15/54 (27%), Positives = 17/54 (31%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPPXXXXKKKGGAXPHXNXG 421
PPPPPP P PPPP ++K P N G
Sbjct: 1358 PPPPPPTMSKAPTGVPLPVPPPPPLFSPSMILPPPPPPLPSEEKKNPLPTANNG 1411
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/17 (58%), Positives = 10/17 (58%)
Frame = -2
Query: 588 GXPPPPPPXKKXXPPPP 538
G PPP PP PPPP
Sbjct: 1597 GMPPPGPPPPNGGPPPP 1613
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/40 (35%), Positives = 14/40 (35%), Gaps = 3/40 (7%)
Frame = -2
Query: 582 PPPPPPXK---KXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
PPPPPP PPPP PPPP
Sbjct: 1342 PPPPPPPSDDLTPVPPPPPPPPTMSKAPTGVPLPVPPPPP 1381
>Z92831-7|CAB07369.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPP K PPPP
Sbjct: 1508 PPPPPASGKTIPPPP 1522
>Z83219-3|CAD57687.1| 965|Caenorhabditis elegans Hypothetical
protein C31C9.6 protein.
Length = 965
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -2
Query: 573 PPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
PP K PPPP + K PPPP
Sbjct: 459 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPP 492
>Z81066-8|CAB02974.2| 2396|Caenorhabditis elegans Hypothetical protein
F22G12.5 protein.
Length = 2396
Score = 29.1 bits (62), Expect = 4.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -2
Query: 582 PPPPPPXKKXXPPPP 538
PPPPP K PPPP
Sbjct: 1508 PPPPPASGKTIPPPP 1522
>U10438-9|AAU87834.1| 616|Caenorhabditis elegans Hypothetical
protein B0280.13 protein.
Length = 616
Score = 29.1 bits (62), Expect = 4.6
Identities = 12/34 (35%), Positives = 13/34 (38%)
Frame = -2
Query: 573 PPPXKKXXPPPPXKXXXXXXXXXXXXXXKKPPPP 472
PP K PPPP + K PPPP
Sbjct: 466 PPTTPKPAPPPPSRIPNPSPSPQPAEVSKSPPPP 499
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 28.7 bits (61), Expect = 6.1
Identities = 11/30 (36%), Positives = 14/30 (46%)
Frame = -2
Query: 489 KKPPPPXXXXKKKGGAXPHXNXGGGXKKGG 400
+KPPPP ++ GG P G GG
Sbjct: 509 QKPPPPPPQSQQAGGGGPPTRNASGTSTGG 538
>AL023844-8|CAA19534.1| 396|Caenorhabditis elegans Hypothetical
protein Y48A6B.13 protein.
Length = 396
Score = 28.3 bits (60), Expect = 8.0
Identities = 9/15 (60%), Positives = 11/15 (73%)
Frame = -2
Query: 576 PPPPXKKXXPPPPXK 532
PPPP +K PPPP +
Sbjct: 314 PPPPTQKAPPPPPTR 328
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 11,622,384
Number of Sequences: 27780
Number of extensions: 202252
Number of successful extensions: 2107
Number of sequences better than 10.0: 39
Number of HSP's better than 10.0 without gapping: 622
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1511
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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