Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_D17
(945 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 113 6e-24
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 95 2e-18
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 85 2e-15
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 62 2e-08
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 56 1e-06
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 53 1e-05
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 42 0.023
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.053
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 38 0.49
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 38 0.49
UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase... 36 1.5
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 36 2.0
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 35 2.6
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 33 8.0
UniRef50_UPI0000DA21FE Cluster: PREDICTED: similar to nuclease s... 33 8.0
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 33 8.0
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 113 bits (272), Expect = 6e-24
Identities = 67/114 (58%), Positives = 71/114 (62%)
Frame = +1
Query: 373 RGKAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQEXTCEQKASKRP 552
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 553 GTVKRPRCWRFSIGSAPLTSITKIDAQXKXGETRQDYKDTRRFPLEXPSCXLLF 714
RPR RFSIGSAPLTSI K DAQ GETRQDYKD RRFPL PSC LLF
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPLVAPSCALLF 127
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 95.5 bits (227), Expect = 2e-18
Identities = 49/71 (69%), Positives = 51/71 (71%)
Frame = +1
Query: 541 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQXKXGETRQDYKDTRRFPLEXPSCXLLFRX 720
SK+ T R RFSIGSAPLTSITKIDAQ + GETRQDYKDTRRFPLE PSC LLFR
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSCALLFRP 61
Query: 721 LAXYRDTCXAF 753
DTC F
Sbjct: 62 -CRLPDTCPPF 71
Score = 50.4 bits (115), Expect = 7e-05
Identities = 22/34 (64%), Positives = 24/34 (70%)
Frame = +2
Query: 752 FSLREAWGFLIAXXVGFXIRXXSFPPTWAVXQNP 853
FSLREAW FLIA VG +R SF P+WAV NP
Sbjct: 71 FSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 85.0 bits (201), Expect = 2e-15
Identities = 41/52 (78%), Positives = 42/52 (80%)
Frame = +1
Query: 559 VKRPRCWRFSIGSAPLTSITKIDAQXKXGETRQDYKDTRRFPLEXPSCXLLF 714
V+ PR RFSIGSAPLTSITK DAQ GETRQDYKDTRRFPL PSC LLF
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPLAAPSCALLF 95
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 62.5 bits (145), Expect = 2e-08
Identities = 29/38 (76%), Positives = 29/38 (76%)
Frame = -1
Query: 549 PFAGLLLTCXFLRYPLILWITVLPPLSELIPLAAAERP 436
P LLTC F YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 56.4 bits (130), Expect = 1e-06
Identities = 31/57 (54%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 349 CINESANARGKAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 516
CI + A AR +AV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 52.8 bits (121), Expect = 1e-05
Identities = 33/91 (36%), Positives = 44/91 (48%), Gaps = 2/91 (2%)
Frame = +1
Query: 448 CGERYQLTQRR*YG--YPQNQGITQEXTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 621
C R Q R G +P+N I + + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 622 IDAQXKXGETRQDYKDTRRFPLEXPSCXLLF 714
I Q K +T+ +YK T FPL+ PS LLF
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQSPSYSLLF 112
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 41.9 bits (94), Expect = 0.023
Identities = 19/20 (95%), Positives = 19/20 (95%)
Frame = +3
Query: 468 HSKAVIRLSTESGDNAGXNM 527
HSKAVIRLSTESGDNAG NM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.053
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 347 SALMNRPTRGERRFAYW 397
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 37.5 bits (83), Expect = 0.49
Identities = 16/30 (53%), Positives = 18/30 (60%)
Frame = -3
Query: 853 GVLGNSPGWXERXXPNXETYXXXYEKAPRF 764
GV SP W ER P+ +T YEKAPRF
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRF 56
Score = 33.9 bits (74), Expect = 6.1
Identities = 18/39 (46%), Positives = 24/39 (61%)
Frame = -2
Query: 779 ESPTLPEGRKAXQVSR*XARXRNRRXHEGXSRGKRLVSL 663
++P P+G+KA QVS + RNRR HEG + K SL
Sbjct: 52 KAPRFPKGKKAEQVSG-KRQGRNRRAHEGAAGEKSPASL 89
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 37.5 bits (83), Expect = 0.49
Identities = 18/24 (75%), Positives = 20/24 (83%)
Frame = -2
Query: 419 ERGSGRAPNTQTAFPRALADSLMQ 348
+R + APNTQTA PRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_Q02779 Cluster: Mitogen-activated protein kinase kinase
kinase 10; n=21; Euteleostomi|Rep: Mitogen-activated
protein kinase kinase kinase 10 - Homo sapiens (Human)
Length = 954
Score = 35.9 bits (79), Expect = 1.5
Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
Frame = -1
Query: 870 SXQWXRGFWXTAQ--VGGNDXXRIXKPTXXAMRKPHASRREKGGTGIPVXGQGSEQEXAR 697
S W RG + VGG R P+ ++ R G + G+GS+Q +
Sbjct: 535 SGTWSRGGPPKKEELVGGKKKGRTWGPSSTLQKE-----RVGGEERLKGLGEGSKQWSSS 589
Query: 696 GXFQGETPGIFIVLSGFATFXLSVDFCDARQGGGAYGKTPATRPFYGSWP 547
G++P + GFA+ +F +A GG + +P + P Y S P
Sbjct: 590 APNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 35.5 bits (78), Expect = 2.0
Identities = 15/21 (71%), Positives = 17/21 (80%)
Frame = +1
Query: 748 AFLPSGSVGLSHSXXCRFXNS 810
AFLPSGSV LSHS CR+ +S
Sbjct: 16 AFLPSGSVALSHSSRCRYLSS 36
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 35.1 bits (77), Expect = 2.6
Identities = 15/19 (78%), Positives = 15/19 (78%)
Frame = +2
Query: 152 DPXMIXYIDXFGQTTTXMQ 208
DP MI YID FGQTTT MQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 33.5 bits (73), Expect = 8.0
Identities = 23/64 (35%), Positives = 28/64 (43%)
Frame = +2
Query: 662 IKIPGVSPWXXPRALSCSXXXXXXXXXXXXFSLREAWGFLIAXXVGFXIRXXSFPPTWAV 841
+KI VS P ALSCS FSL + + G R SF P+WAV
Sbjct: 32 LKIITVSDESLPLALSCSNPAVSRIPVPP-FSLAGSVALSHSSHSGISARCRSFAPSWAV 90
Query: 842 XQNP 853
+NP
Sbjct: 91 SKNP 94
>UniRef50_UPI0000DA21FE Cluster: PREDICTED: similar to nuclease
sensitive element binding protein 1; n=1; Rattus
norvegicus|Rep: PREDICTED: similar to nuclease sensitive
element binding protein 1 - Rattus norvegicus
Length = 120
Score = 33.5 bits (73), Expect = 8.0
Identities = 25/87 (28%), Positives = 40/87 (45%), Gaps = 2/87 (2%)
Frame = +1
Query: 421 LTRCARSFGCGERYQLTQRR*YGYPQNQGITQEXTCEQKASKRPGTVK--RPRCWRFSIG 594
+T A + G GE+ + ++ Y + + + + E+ A KR +K RP+
Sbjct: 20 VTEGADNQGAGEQSRPVRKNMYDHDSAGALLAKDSQERMAMKRTKKIKEMRPKVSSHLNV 79
Query: 595 SAPLTSITKIDAQXKXGETRQDYKDTR 675
S TSIT DAQ QD K+T+
Sbjct: 80 SITTTSITNADAQRALPREPQDGKETK 106
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.5 bits (73), Expect = 8.0
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 558 GSWPFAGLLLTCXFLRYP---LILWITVLPPLSELIPLAAAERP 436
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 660,163,057
Number of Sequences: 1657284
Number of extensions: 11101940
Number of successful extensions: 21190
Number of sequences better than 10.0: 16
Number of HSP's better than 10.0 without gapping: 20538
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 21183
length of database: 575,637,011
effective HSP length: 101
effective length of database: 408,251,327
effective search space used: 86957532651
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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