Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_D17
         (945 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase w...    36   0.21 
X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2 pr...    36   0.21 
BC019928-1|AAH19928.1|  201|Homo sapiens LPHN1 protein protein.        31   4.6  
AK022001-1|BAB13950.1|  201|Homo sapiens protein ( Homo sapiens ...    31   4.6  

>Z48615-1|CAA88531.1|  953|Homo sapiens serine/threonine kinase with
           SH3 domain, leucine zipper domain and proline rich
           protein.
          Length = 953

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
 Frame = -1

Query: 870 SXQWXRGFWXTAQ--VGGNDXXRIXKPTXXAMRKPHASRREKGGTGIPVXGQGSEQEXAR 697
           S  W RG     +  VGG    R   P+    ++     R  G   +   G+GS+Q  + 
Sbjct: 534 SGTWSRGGPPKKEELVGGKKKGRTWGPSSTLQKE-----RVGGEERLKGLGEGSKQWSSS 588

Query: 696 GXFQGETPGIFIVLSGFATFXLSVDFCDARQGGGAYGKTPATRPFYGSWP 547
               G++P    +  GFA+     +F +A  GG +   +P + P Y S P
Sbjct: 589 APNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 638


>X90846-1|CAA62351.1|  954|Homo sapiens mixed lineage kinase 2
           protein.
          Length = 954

 Score = 35.9 bits (79), Expect = 0.21
 Identities = 29/110 (26%), Positives = 46/110 (41%), Gaps = 2/110 (1%)
 Frame = -1

Query: 870 SXQWXRGFWXTAQ--VGGNDXXRIXKPTXXAMRKPHASRREKGGTGIPVXGQGSEQEXAR 697
           S  W RG     +  VGG    R   P+    ++     R  G   +   G+GS+Q  + 
Sbjct: 535 SGTWSRGGPPKKEELVGGKKKGRTWGPSSTLQKE-----RVGGEERLKGLGEGSKQWSSS 589

Query: 696 GXFQGETPGIFIVLSGFATFXLSVDFCDARQGGGAYGKTPATRPFYGSWP 547
               G++P    +  GFA+     +F +A  GG +   +P + P Y S P
Sbjct: 590 APNLGKSPKHTPIAPGFASLNEMEEFAEAEDGGSSVPPSPYSTPSYLSVP 639


>BC019928-1|AAH19928.1|  201|Homo sapiens LPHN1 protein protein.
          Length = 201

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 382 PFPARWPIH*CRKNLPHLPLNLKHK 308
           PFP RWP+H C    P L  +  HK
Sbjct: 132 PFPQRWPLHLCSDLSPSLCPSFSHK 156


>AK022001-1|BAB13950.1|  201|Homo sapiens protein ( Homo sapiens
           cDNA FLJ11939 fis, clone HEMBB1000592. ).
          Length = 201

 Score = 31.5 bits (68), Expect = 4.6
 Identities = 12/25 (48%), Positives = 14/25 (56%)
 Frame = -3

Query: 382 PFPARWPIH*CRKNLPHLPLNLKHK 308
           PFP RWP+H C    P L  +  HK
Sbjct: 132 PFPQRWPLHLCSDLSPSLCPSFSHK 156


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 99,855,941
Number of Sequences: 237096
Number of extensions: 1901905
Number of successful extensions: 4474
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 4388
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4474
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 12436574528
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)