Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_D13
(907 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 129 8e-29
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 102 1e-20
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 77 6e-13
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 74 6e-12
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 4e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 57 7e-07
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 45 0.002
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 45 0.003
UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11; ... 45 0.003
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.050
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.087
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 40 0.12
UniRef50_Q4QAI7 Cluster: Putative uncharacterized protein; n=2; ... 37 0.62
UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella ve... 36 1.1
UniRef50_A7IF76 Cluster: AsmA family protein precursor; n=1; Xan... 36 1.4
UniRef50_UPI0000E4A47E Cluster: PREDICTED: similar to CG9425-PB,... 35 3.3
UniRef50_Q84R72 Cluster: Putative uncharacterized protein OSJNBb... 35 3.3
UniRef50_Q2IE38 Cluster: Cytochrome c family protein precursor; ... 34 4.3
UniRef50_Q9NZM4 Cluster: Glioma tumor suppressor candidate regio... 34 4.3
UniRef50_Q65553 Cluster: UL36; n=5; Varicellovirus|Rep: UL36 - B... 34 5.7
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.7
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.7
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.7
UniRef50_UPI000023F2AD Cluster: hypothetical protein FG06087.1; ... 33 7.6
UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4... 33 7.6
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 129 bits (312), Expect = 8e-29
Identities = 76/127 (59%), Positives = 83/127 (65%), Gaps = 6/127 (4%)
Frame = +3
Query: 486 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPLESSLVRSPCFR 665
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRR PLE+ + FR
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEAPSC-ALLFR 60
Query: 666 PCRLPDTCPPFSLREAWR--LSH----SSRCRYLSSV*VVRSKLGCVHEPPVQPDRCALS 827
PCRLPDTCPPFSLREAWR ++H S RCR + V C + PP P
Sbjct: 61 PCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAV-----CTN-PPFSPTAAPYP 114
Query: 828 GTIVLSP 848
TIVLSP
Sbjct: 115 VTIVLSP 121
Score = 96.3 bits (229), Expect = 9e-19
Identities = 50/70 (71%), Positives = 53/70 (75%), Gaps = 2/70 (2%)
Frame = +1
Query: 628 PWKAPSCALPVSDPAAYPIPVRLSPFGKRGA--FLIAHAVGISVRCRSFAPSWAVCTNPP 801
P +APSCAL + P +P PF R A FLIAHAVGISVRCRSFAPSWAVCTNPP
Sbjct: 49 PLEAPSCAL-LFRPCR--LPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNPP 105
Query: 802 FSPTAAPYPV 831
FSPTAAPYPV
Sbjct: 106 FSPTAAPYPV 115
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 102 bits (244), Expect = 1e-20
Identities = 61/105 (58%), Positives = 66/105 (62%)
Frame = +3
Query: 318 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 497
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 498 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPL 632
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RR PL
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL 118
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 77.0 bits (181), Expect = 6e-13
Identities = 39/63 (61%), Positives = 44/63 (69%), Gaps = 2/63 (3%)
Frame = +1
Query: 649 ALPVSDPAAYPIPVRLSPFGKRGAFLIAHAV--GISVRCRSFAPSWAVCTNPPFSPTAAP 822
AL S+PA IPV PF G+ ++H+ GIS RCRSFAPSWAV NPPFSPTAAP
Sbjct: 45 ALSCSNPAVSRIPV--PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNPPFSPTAAP 102
Query: 823 YPV 831
YPV
Sbjct: 103 YPV 105
Score = 37.5 bits (83), Expect = 0.47
Identities = 30/90 (33%), Positives = 34/90 (37%)
Frame = +3
Query: 579 VRGGETRQDYKDTRRXPLESSLVRSPCFRPCRLPDTCPPFSLREAWRLSHSSRCRYLSSV 758
VR GETRQD K ES + C P PPFSL + LSHSS +
Sbjct: 23 VRSGETRQDLKIITVSD-ESLPLALSCSNPAVSRIPVPPFSLAGSVALSHSSHSGISARC 81
Query: 759 *VVRSKLGCVHEPPVQPDRCALSGTIVLSP 848
PP P T+ LSP
Sbjct: 82 RSFAPSWAVSKNPPFSPTAAPYPVTVHLSP 111
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.7 bits (173), Expect = 6e-12
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +3
Query: 504 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPL 632
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRR PL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 4e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -3
Query: 494 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 381
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +3
Query: 294 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 461
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 56.8 bits (131), Expect = 7e-07
Identities = 32/65 (49%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Frame = -2
Query: 786 HSPAWSERPTPN*DTYSVSYEKGATLPEGRKADRYRVSG-RVGNRESARGSFPGXNAWYL 610
+SPAWSERP P+ DT SVSYEK P+G+KA+ +VSG R G A G +
Sbjct: 31 YSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAE--QVSGKRQGRNRRAHEGAAGEKSPAS 88
Query: 609 YSPVG 595
SPVG
Sbjct: 89 LSPVG 93
Score = 39.1 bits (87), Expect = 0.15
Identities = 24/78 (30%), Positives = 35/78 (44%)
Frame = -3
Query: 851 GWTQDDSTG*GAAVGLNGGFVHTAQLGANDLHRTEIPTA*AMRKAPRFPKGERRTGIG*A 672
GWTQDDS G + G + + + ++ + KAPRFPKG++ +
Sbjct: 9 GWTQDDSYRKGRSSRAERGVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGK 68
Query: 671 AGSETGRAHEGAFQGXTP 618
RAHEGA +P
Sbjct: 69 RQGRNRRAHEGAAGEKSP 86
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 45.2 bits (102), Expect = 0.002
Identities = 19/19 (100%), Positives = 19/19 (100%)
Frame = +1
Query: 97 DPDMIRYIDEFGQTTTRMQ 153
DPDMIRYIDEFGQTTTRMQ
Sbjct: 346 DPDMIRYIDEFGQTTTRMQ 364
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 44.8 bits (101), Expect = 0.003
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +3
Query: 393 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 566
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 567 IDAQVRGGETRQDYKDTRRXPLES 638
I Q + +T+ +YK T PL+S
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQS 105
>UniRef50_P03851 Cluster: Uncharacterized 9.4 kDa protein; n=11;
cellular organisms|Rep: Uncharacterized 9.4 kDa protein
- Escherichia coli
Length = 84
Score = 44.8 bits (101), Expect = 0.003
Identities = 22/30 (73%), Positives = 23/30 (76%), Gaps = 1/30 (3%)
Frame = +3
Query: 786 VHEPPVQPDRCALSGTIVL-SPPGRPDLSP 872
+HEPPVQPDRCALSG L S P R DLSP
Sbjct: 1 MHEPPVQPDRCALSGNYRLESNPVRHDLSP 30
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +2
Query: 413 HSKAVIRLSTESGDNAGKNM 472
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.050
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +1
Query: 292 SALMNRPTRGERRFAYW 342
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.087
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -1
Query: 364 ERGSGRAPNTQTASPRALADSLMQ 293
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 39.5 bits (88), Expect = 0.12
Identities = 18/19 (94%), Positives = 18/19 (94%)
Frame = +2
Query: 662 PTLPLTRYLSAFLPSGSVA 718
PTLPLT YLSAFLPSGSVA
Sbjct: 6 PTLPLTGYLSAFLPSGSVA 24
>UniRef50_Q4QAI7 Cluster: Putative uncharacterized protein; n=2;
Leishmania|Rep: Putative uncharacterized protein -
Leishmania major
Length = 538
Score = 37.1 bits (82), Expect = 0.62
Identities = 20/41 (48%), Positives = 22/41 (53%)
Frame = +2
Query: 551 DEHHKNRRSSQRWRNPTGL*RYQAFXPGKLPRALSLFPTLP 673
D + RRS RNPT R F PG PRAL+ PTLP
Sbjct: 140 DAQTRGRRSPLISRNPTLCPRSVLFVPGSKPRALAKIPTLP 180
>UniRef50_A7SYZ9 Cluster: Predicted protein; n=1; Nematostella
vectensis|Rep: Predicted protein - Nematostella
vectensis
Length = 1107
Score = 36.3 bits (80), Expect = 1.1
Identities = 26/78 (33%), Positives = 35/78 (44%), Gaps = 7/78 (8%)
Frame = +1
Query: 616 PGVXPWKAPSCALPVSDPAAYPIPVRLSPFGKRGAFLIAHA----VGISVRCRS---FAP 774
PG+ P + P+ V DP P PV + RG L A V S +C + ++P
Sbjct: 633 PGIPPLRGPATGQAVVDPGRMPRPVTCAGRPTRGLDLCGLATVSWVWRSTKCHAVGKYSP 692
Query: 775 SWAVCTNPPFSPTAAPYP 828
+ CT P S APYP
Sbjct: 693 P-STCTRRPKSQRDAPYP 709
>UniRef50_A7IF76 Cluster: AsmA family protein precursor; n=1;
Xanthobacter autotrophicus Py2|Rep: AsmA family protein
precursor - Xanthobacter sp. (strain Py2)
Length = 1331
Score = 35.9 bits (79), Expect = 1.4
Identities = 30/110 (27%), Positives = 44/110 (40%), Gaps = 3/110 (2%)
Frame = +1
Query: 553 RASQKSTLKSEVAKPDRTIKIP-GVXPWKAPSCALPVSDPAAYPIPVRLSPFGK--RGAF 723
RA ++ T + E + + P G P AP A PV+ PA P P ++P +
Sbjct: 1093 RAIERETRRLEERQGRAAPEAPAGTAPPVAPPSAQPVAAPAQIPAPAAIAPVAPSVQPQP 1152
Query: 724 LIAHAVGISVRCRSFAPSWAVCTNPPFSPTAAPYPVLSS*VHPVDPTYRP 873
+ A + AP+ PP AAP PV ++ P P P
Sbjct: 1153 VQAQPAPAPAAAKPAAPA-QTSAPPPAPRPAAPAPVATAPAAPAQPATSP 1201
>UniRef50_UPI0000E4A47E Cluster: PREDICTED: similar to CG9425-PB,
partial; n=4; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to CG9425-PB, partial -
Strongylocentrotus purpuratus
Length = 3748
Score = 34.7 bits (76), Expect = 3.3
Identities = 30/114 (26%), Positives = 44/114 (38%), Gaps = 10/114 (8%)
Frame = +1
Query: 562 QKSTLKSEVAKPDRTIKIPGVXPWKAPSCALPVSDPAAYP------IPVRLSPFGKRGA- 720
Q++ + + + K PG +APS A P YP P P+ ++GA
Sbjct: 572 QQAIAQGRITNQNPPAKAPGAYQNRAPSPAGGAPPPGGYPGNTGSLQPPGAFPYNQKGAP 631
Query: 721 --FLIAHAVGISVRCRSFA-PSWAVCTNPPFSPTAAPYPVLSS*VHPVDPTYRP 873
HA + V F P + T PP SP+ P S +HP + P
Sbjct: 632 APGAFPHAT-LQVNQNGFQQPPAVIRTAPPMSPSPVPQQSQGSLLHPANKVIDP 684
>UniRef50_Q84R72 Cluster: Putative uncharacterized protein
OSJNBb0113I20.4; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Putative uncharacterized protein
OSJNBb0113I20.4 - Oryza sativa subsp. japonica (Rice)
Length = 304
Score = 34.7 bits (76), Expect = 3.3
Identities = 41/131 (31%), Positives = 52/131 (39%), Gaps = 14/131 (10%)
Frame = -3
Query: 887 TRVLPGR*VGSTGWTQDDSTG*GAAVGLNGGFVHTAQLGANDL-----HRTEIPTA-*AM 726
TR GR +G GW ++ + GAA G +GG + LG L RTE+ A A
Sbjct: 48 TRDDGGRSLGPRGWHEEGAPELGAAGGWDGGGQSSGNLGLRGLRSSGRRRTELEAAEGAF 107
Query: 725 RKAPRFPKGERRTGIG*AAGS--------ETGRAHEGAFQGXTPGIFIVLSGFATSDLSV 570
+GER G G E G A GA G I + +D +
Sbjct: 108 AATGVLDEGERSLGPGGGTRRGCRSSGLWEEGTAEGGAQGGGEVPIAVGARLVEAADGTP 167
Query: 569 DFCDARQGGGA 537
DAR GGGA
Sbjct: 168 AASDARGGGGA 178
>UniRef50_Q2IE38 Cluster: Cytochrome c family protein precursor;
n=1; Anaeromyxobacter dehalogenans 2CP-C|Rep: Cytochrome
c family protein precursor - Anaeromyxobacter
dehalogenans (strain 2CP-C)
Length = 436
Score = 34.3 bits (75), Expect = 4.3
Identities = 24/84 (28%), Positives = 40/84 (47%)
Frame = +1
Query: 637 APSCALPVSDPAAYPIPVRLSPFGKRGAFLIAHAVGISVRCRSFAPSWAVCTNPPFSPTA 816
AP LP+++ +YPI L GA+ + VG + + P++ V +PP +
Sbjct: 183 APVTGLPIAESGSYPIGGALPAGTAMGAYRLLAGVGYQPKSSATQPAFTV--SPPVA--V 238
Query: 817 APYPVLSS*VHPVDPTYRPGSTLV 888
AP SS ++ + T R G +V
Sbjct: 239 APSSYNSSELNTFNATTRAGQVVV 262
>UniRef50_Q9NZM4 Cluster: Glioma tumor suppressor candidate region
gene 1 protein; n=13; cellular organisms|Rep: Glioma
tumor suppressor candidate region gene 1 protein - Homo
sapiens (Human)
Length = 1509
Score = 34.3 bits (75), Expect = 4.3
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 616 PGVXPWKAPSCALPVSDPAAYPIPVRLSPFGKRGAFLIAHAVGISVRCRSFAPSWAVCTN 795
P P + S + P S+P +P P +P G F+I + +G+ + AP+
Sbjct: 749 PSRPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQ 808
Query: 796 PPFSPTAAP 822
PP P + P
Sbjct: 809 PPLRPQSQP 817
>UniRef50_Q65553 Cluster: UL36; n=5; Varicellovirus|Rep: UL36 - Bovine
herpesvirus 1
Length = 3247
Score = 33.9 bits (74), Expect = 5.7
Identities = 28/92 (30%), Positives = 39/92 (42%), Gaps = 3/92 (3%)
Frame = +1
Query: 589 AKPDRTIKIPGVXPWKAPSCALPVSDPAAYPI-PVRLSPFGKRGAFLIAHAVGISVRCR- 762
A P ++ P AP A P++ P A PI P P A IA +
Sbjct: 2989 ALPAPRLEAPAAASLPAPPIAPPIAPPIAPPIAPPIAPPIAPPIAPPIAPPIAPPAMPAP 3048
Query: 763 -SFAPSWAVCTNPPFSPTAAPYPVLSS*VHPV 855
S AP+ A + PP +P A P P+++ PV
Sbjct: 3049 PSAAPATAGSSAPPIAPPATPAPLIAPLAAPV 3080
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.7
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -3
Query: 503 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 381
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.7
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +1
Query: 175 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 342
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.7
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -2
Query: 255 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 91
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_UPI000023F2AD Cluster: hypothetical protein FG06087.1;
n=1; Gibberella zeae PH-1|Rep: hypothetical protein
FG06087.1 - Gibberella zeae PH-1
Length = 408
Score = 33.5 bits (73), Expect = 7.6
Identities = 31/108 (28%), Positives = 40/108 (37%), Gaps = 1/108 (0%)
Frame = -3
Query: 800 GGFVHTAQLGANDLHRTEIPTA*AMRKAPRFPKGERRTGIG*AAGSETGRAHEGAFQGXT 621
G F+ +Q A+ T+ P A A P PK G G AGS+ G +G G
Sbjct: 278 GAFITVSQPAASQPSATQAPEASATPATPETPK----NGSGEDAGSDKGAGSDGGNNGGN 333
Query: 620 PGIFIVLSGFATSDLSVDFCDARQGGGAYGKTPATRPFYGSW-PFAGL 480
G GFA C + G + R G+W P GL
Sbjct: 334 SGSGSGSGGFAAGTA----CTSEGEWNCIGGSSFQRCASGTWTPSQGL 377
>UniRef50_P03845 Cluster: Putative uncharacterized protein 1; n=4;
Bacteria|Rep: Putative uncharacterized protein 1 -
Escherichia coli
Length = 42
Score = 33.5 bits (73), Expect = 7.6
Identities = 12/12 (100%), Positives = 12/12 (100%)
Frame = -2
Query: 786 HSPAWSERPTPN 751
HSPAWSERPTPN
Sbjct: 31 HSPAWSERPTPN 42
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 870,844,577
Number of Sequences: 1657284
Number of extensions: 18236757
Number of successful extensions: 56038
Number of sequences better than 10.0: 28
Number of HSP's better than 10.0 without gapping: 52088
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 55902
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82391630811
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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