Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_D13
(907 letters)
Database: human
237,096 sequences; 76,859,062 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor... 34 0.62
BC051842-1|AAH51842.1| 117|Homo sapiens C19orf48 protein protein. 32 3.3
BC037227-1|AAH37227.1| 117|Homo sapiens chromosome 19 open read... 32 3.3
BC006151-1|AAH06151.1| 117|Homo sapiens chromosome 19 open read... 32 3.3
AY491972-1|AAR36899.1| 117|Homo sapiens multidrug resistance re... 32 3.3
BC142728-1|AAI42729.1| 417|Homo sapiens SAMD14 protein protein. 31 5.7
BC141822-1|AAI41823.1| 417|Homo sapiens SAMD14 protein protein. 31 5.7
BC047081-1|AAH47081.1| 427|Homo sapiens SAMD14 protein protein. 31 5.7
BC029872-1|AAH29872.1| 247|Homo sapiens SAMD14 protein protein. 31 5.7
AK124948-1|BAC86004.1| 347|Homo sapiens protein ( Homo sapiens ... 31 5.7
X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein. 31 7.6
BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility c... 31 7.6
BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility c... 31 7.6
>AF182077-1|AAF62874.1| 1509|Homo sapiens glioma tumor suppressor
candidate region protein 1 protein.
Length = 1509
Score = 34.3 bits (75), Expect = 0.62
Identities = 19/69 (27%), Positives = 31/69 (44%)
Frame = +1
Query: 616 PGVXPWKAPSCALPVSDPAAYPIPVRLSPFGKRGAFLIAHAVGISVRCRSFAPSWAVCTN 795
P P + S + P S+P +P P +P G F+I + +G+ + AP+
Sbjct: 749 PSRPPSRPQSVSRPPSEPPLHPCPPPQAPPTLPGIFVIQNQLGVPPPASNPAPTAPGPPQ 808
Query: 796 PPFSPTAAP 822
PP P + P
Sbjct: 809 PPLRPQSQP 817
>BC051842-1|AAH51842.1| 117|Homo sapiens C19orf48 protein protein.
Length = 117
Score = 31.9 bits (69), Expect = 3.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 666 PCRLPDTC-PPFSLREAWRLSHSSRCRYLSSV*VVRSKLGCVHEPPVQP 809
P R P +C P W LSH+ R R++S + +LG EPP P
Sbjct: 25 PARPPGSCWDPTQCTRTWLLSHTPRRRWISGLPRASCRLG--EEPPPLP 71
>BC037227-1|AAH37227.1| 117|Homo sapiens chromosome 19 open reading
frame 48 protein.
Length = 117
Score = 31.9 bits (69), Expect = 3.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 666 PCRLPDTC-PPFSLREAWRLSHSSRCRYLSSV*VVRSKLGCVHEPPVQP 809
P R P +C P W LSH+ R R++S + +LG EPP P
Sbjct: 25 PARPPGSCWDPTQCTRTWLLSHTPRRRWISGLPRASCRLG--EEPPPLP 71
>BC006151-1|AAH06151.1| 117|Homo sapiens chromosome 19 open reading
frame 48 protein.
Length = 117
Score = 31.9 bits (69), Expect = 3.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 666 PCRLPDTC-PPFSLREAWRLSHSSRCRYLSSV*VVRSKLGCVHEPPVQP 809
P R P +C P W LSH+ R R++S + +LG EPP P
Sbjct: 25 PARPPGSCWDPTQCTRTWLLSHTPRRRWISGLPRASCRLG--EEPPPLP 71
>AY491972-1|AAR36899.1| 117|Homo sapiens multidrug resistance
related protein protein.
Length = 117
Score = 31.9 bits (69), Expect = 3.3
Identities = 18/49 (36%), Positives = 24/49 (48%), Gaps = 1/49 (2%)
Frame = +3
Query: 666 PCRLPDTC-PPFSLREAWRLSHSSRCRYLSSV*VVRSKLGCVHEPPVQP 809
P R P +C P W LSH+ R R++S + +LG EPP P
Sbjct: 25 PARPPGSCWDPTQCTRTWLLSHTPRRRWISGLPRASCRLG--EEPPPLP 71
>BC142728-1|AAI42729.1| 417|Homo sapiens SAMD14 protein protein.
Length = 417
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 556 ASQKSTLKSEVAKPDRTIKIPGVXPWKAPSCALP 657
ASQ+STL + P + KIP PW+ C+ P
Sbjct: 272 ASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 304
>BC141822-1|AAI41823.1| 417|Homo sapiens SAMD14 protein protein.
Length = 417
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 556 ASQKSTLKSEVAKPDRTIKIPGVXPWKAPSCALP 657
ASQ+STL + P + KIP PW+ C+ P
Sbjct: 272 ASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 304
>BC047081-1|AAH47081.1| 427|Homo sapiens SAMD14 protein protein.
Length = 427
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 556 ASQKSTLKSEVAKPDRTIKIPGVXPWKAPSCALP 657
ASQ+STL + P + KIP PW+ C+ P
Sbjct: 282 ASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 314
>BC029872-1|AAH29872.1| 247|Homo sapiens SAMD14 protein protein.
Length = 247
Score = 31.1 bits (67), Expect = 5.7
Identities = 14/34 (41%), Positives = 19/34 (55%)
Frame = +1
Query: 556 ASQKSTLKSEVAKPDRTIKIPGVXPWKAPSCALP 657
ASQ+STL + P + KIP PW+ C+ P
Sbjct: 102 ASQESTLSDDSTPPSSSPKIPS-GPWQEAKCSYP 134
>AK124948-1|BAC86004.1| 347|Homo sapiens protein ( Homo sapiens
cDNA FLJ42958 fis, clone BRSTN2010750. ).
Length = 347
Score = 31.1 bits (67), Expect = 5.7
Identities = 25/73 (34%), Positives = 31/73 (42%)
Frame = +1
Query: 610 KIPGVXPWKAPSCALPVSDPAAYPIPVRLSPFGKRGAFLIAHAVGISVRCRSFAPSWAVC 789
K PG P + P L P ++ R +P R A L A +S C SF P V
Sbjct: 129 KRPGAWPERQPRAGL---SPESWS-RAREAPIPPRPAALSA----VSSICSSFHPQLCVP 180
Query: 790 TNPPFSPTAAPYP 828
PPFS + P P
Sbjct: 181 VIPPFSKSPVPIP 193
>X80199-1|CAC27699.1| 703|Homo sapiens MLN51 protein.
Length = 703
Score = 30.7 bits (66), Expect = 7.6
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 586 VAKPDRTIKIPGVXPWKAPSCALPVSDPAAYPIPVRLSPFGKRGAFLIAHAVGISVRCRS 765
+ +P + PG+ P + P+ P+ +P YP PV +SP L+A + +
Sbjct: 573 LVQPGMNLPHPGLHPHQTPA---PLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMN 629
Query: 766 FA-PSWAVCTNPPFSPTAAPYP 828
F PS+ P++P A P P
Sbjct: 630 FGNPSY------PYAPGALPPP 645
>BC050526-1|AAH50526.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 30.7 bits (66), Expect = 7.6
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 586 VAKPDRTIKIPGVXPWKAPSCALPVSDPAAYPIPVRLSPFGKRGAFLIAHAVGISVRCRS 765
+ +P + PG+ P + P+ P+ +P YP PV +SP L+A + +
Sbjct: 573 LVQPGMNLPHPGLHPHQTPA---PLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMN 629
Query: 766 FA-PSWAVCTNPPFSPTAAPYP 828
F PS+ P++P A P P
Sbjct: 630 FGNPSY------PYAPGALPPP 645
>BC044656-1|AAH44656.1| 703|Homo sapiens cancer susceptibility
candidate 3 protein.
Length = 703
Score = 30.7 bits (66), Expect = 7.6
Identities = 23/82 (28%), Positives = 38/82 (46%), Gaps = 1/82 (1%)
Frame = +1
Query: 586 VAKPDRTIKIPGVXPWKAPSCALPVSDPAAYPIPVRLSPFGKRGAFLIAHAVGISVRCRS 765
+ +P + PG+ P + P+ P+ +P YP PV +SP L+A + +
Sbjct: 573 LVQPGMNLPHPGLHPHQTPA---PLPNPGLYPPPVSMSPGQPPPQQLLAPTYFSAPGVMN 629
Query: 766 FA-PSWAVCTNPPFSPTAAPYP 828
F PS+ P++P A P P
Sbjct: 630 FGNPSY------PYAPGALPPP 645
Database: human
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 76,859,062
Number of sequences in database: 237,096
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 129,034,955
Number of Sequences: 237096
Number of extensions: 2939508
Number of successful extensions: 9450
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 8691
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 9434
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11714809042
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -