Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_D08
(909 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_P84051 Cluster: Histone H2A; n=60; Protostomia|Rep: His... 93 1e-17
UniRef50_P16104 Cluster: Histone H2A.x; n=12; Eukaryota|Rep: His... 90 8e-17
UniRef50_P35061 Cluster: Histone H2A; n=31; Eumetazoa|Rep: Histo... 89 1e-16
UniRef50_Q6FI13 Cluster: Histone H2A type 2-A; n=268; Eukaryota|... 89 2e-16
UniRef50_Q9P0M6 Cluster: Core histone macro-H2A.2; n=74; Eukaryo... 68 4e-10
UniRef50_A7R6L6 Cluster: Chromosome undetermined scaffold_1333, ... 67 5e-10
UniRef50_O75367 Cluster: Core histone macro-H2A.1; n=179; Eukary... 66 1e-09
UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep: H... 64 5e-09
UniRef50_A2YNE9 Cluster: Histone H2A; n=1; Oryza sativa (indica ... 64 6e-09
UniRef50_UPI0000DA3FD0 Cluster: PREDICTED: similar to Histone H2... 62 2e-08
UniRef50_A4VD85 Cluster: Putative uncharacterized protein; n=1; ... 59 1e-07
UniRef50_Q86EU0 Cluster: Histone H2A; n=1; Schistosoma japonicum... 58 3e-07
UniRef50_Q54WG6 Cluster: Histone H2A; n=1; Dictyostelium discoid... 58 3e-07
UniRef50_A3CI01 Cluster: Histone H2A; n=1; Oryza sativa (japonic... 58 4e-07
UniRef50_Q7PL33 Cluster: Histone H2A; n=1; Drosophila melanogast... 57 5e-07
UniRef50_A3CGY8 Cluster: Histone H2A; n=1; Oryza sativa (japonic... 57 7e-07
UniRef50_Q7PDD4 Cluster: Histone H2A; n=2; Giardia intestinalis|... 54 5e-06
UniRef50_UPI0000498F6A Cluster: histone H2A; n=2; Entamoeba hist... 53 9e-06
UniRef50_P35066 Cluster: Histone H2A; n=40; Trypanosomatidae|Rep... 52 2e-05
UniRef50_Q23429 Cluster: Histone H2A; n=1; Caenorhabditis elegan... 51 5e-05
UniRef50_Q4QEG6 Cluster: Histone H2A, putative; n=7; Trypanosoma... 50 8e-05
UniRef50_Q9LD75 Cluster: Histone H2A.2; n=1; Lilium longiflorum|... 48 3e-04
UniRef50_Q4SU61 Cluster: Chromosome undetermined SCAF14010, whol... 48 4e-04
UniRef50_Q54HW2 Cluster: Histone H2A domain-containing protein; ... 48 4e-04
UniRef50_A7PZY1 Cluster: Chromosome chr8 scaffold_41, whole geno... 45 0.002
UniRef50_A5BU78 Cluster: Putative uncharacterized protein; n=1; ... 45 0.002
UniRef50_Q71UI9 Cluster: Histone H2AV; n=156; Eukaryota|Rep: His... 44 0.005
UniRef50_UPI0000EB30ED Cluster: UPI0000EB30ED related cluster; n... 44 0.007
UniRef50_Q12692 Cluster: Histone H2A.Z; n=65; Eukaryota|Rep: His... 44 0.007
UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A his... 43 0.009
UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone... 43 0.009
UniRef50_A0DGQ5 Cluster: Histone H2A; n=11; Eukaryota|Rep: Histo... 43 0.009
UniRef50_Q54LA5 Cluster: Histone H2A; n=1; Dictyostelium discoid... 42 0.016
UniRef50_P48003 Cluster: Histone H2A.Z; n=7; Eukaryota|Rep: Hist... 42 0.016
UniRef50_UPI0000E45ED1 Cluster: PREDICTED: similar to LOC564406 ... 42 0.029
UniRef50_P59890 Cluster: Histone H2A [Contains: Hipposin]; n=18;... 42 0.029
UniRef50_Q54HV9 Cluster: Histone H2A domain-containing protein; ... 39 0.15
UniRef50_A7QA26 Cluster: Chromosome undetermined scaffold_69, wh... 37 0.82
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 36 1.1
UniRef50_A2XQJ2 Cluster: Histone H2A; n=2; Oryza sativa|Rep: His... 36 1.4
UniRef50_Q388A3 Cluster: Putative uncharacterized protein; n=1; ... 35 2.5
UniRef50_A2TIR8 Cluster: Receptor for egg jelly protein 9; n=9; ... 35 2.5
UniRef50_Q8C5V8 Cluster: Adult male testis cDNA, RIKEN full-leng... 34 5.8
UniRef50_Q24CD1 Cluster: Core histone H2A/H2B/H3/H4 family prote... 34 5.8
>UniRef50_P84051 Cluster: Histone H2A; n=60; Protostomia|Rep:
Histone H2A - Drosophila melanogaster (Fruit fly)
Length = 124
Score = 92.7 bits (220), Expect = 1e-17
Identities = 47/107 (43%), Positives = 65/107 (60%)
Frame = +2
Query: 83 KAHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXX 262
KA + S + GL+ P +GR H+LLR GNYA R+G+G
Sbjct: 13 KAKSRSNRAGLQFP-----VGRIHRLLRKGNYAERVGAGAPVYLAAVMEYLAAEVLELAG 67
Query: 263 XXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 403
++ KKTR+IPRH+ AI+NDEEL+++++GVTI+QGGVLP IQ V
Sbjct: 68 NAARDNKKTRIIPRHLQLAIRNDEELNKLLSGVTIAQGGVLPNIQAV 114
>UniRef50_P16104 Cluster: Histone H2A.x; n=12; Eukaryota|Rep:
Histone H2A.x - Homo sapiens (Human)
Length = 143
Score = 89.8 bits (213), Expect = 8e-17
Identities = 46/107 (42%), Positives = 65/107 (60%)
Frame = +2
Query: 83 KAHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXX 262
KA + S++ GL+ P +GR H+LLR G+YA R+G+G
Sbjct: 14 KAKSRSSRAGLQFP-----VGRVHRLLRKGHYAERVGAGAPVYLAAVLEYLTAEILELAG 68
Query: 263 XXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 403
++ KKTR+IPRH+ AI+NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 69 NAARDNKKTRIIPRHLQLAIRNDEELNKLLGGVTIAQGGVLPNIQAV 115
>UniRef50_P35061 Cluster: Histone H2A; n=31; Eumetazoa|Rep: Histone
H2A - Acropora formosa (Staghorn coral)
Length = 125
Score = 89.4 bits (212), Expect = 1e-16
Identities = 44/107 (41%), Positives = 65/107 (60%)
Frame = +2
Query: 83 KAHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXX 262
K+ + S++ GL+ P +GR H+LLR GNYA R+G+G
Sbjct: 13 KSKSRSSRAGLQFP-----VGRIHRLLRKGNYAERVGAGAPVYMAAVLEYLSAEILELAG 67
Query: 263 XXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 403
++ KK+R+IPRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 68 NAARDNKKSRIIPRHLQLAVRNDEELNKLLAGVTIAQGGVLPNIQAV 114
>UniRef50_Q6FI13 Cluster: Histone H2A type 2-A; n=268;
Eukaryota|Rep: Histone H2A type 2-A - Homo sapiens
(Human)
Length = 130
Score = 88.6 bits (210), Expect = 2e-16
Identities = 46/107 (42%), Positives = 64/107 (59%)
Frame = +2
Query: 83 KAHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXX 262
KA + S++ GL+ P +GR H+LLR GNYA R+G+G
Sbjct: 14 KAKSRSSRAGLQFP-----VGRVHRLLRKGNYAERVGAGAPVYMAAVLEYLTAEILELAG 68
Query: 263 XXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 403
++ KKTR+IPRH+ AI+NDEEL++++ VTI+QGGVLP IQ V
Sbjct: 69 NAARDNKKTRIIPRHLQLAIRNDEELNKLLGKVTIAQGGVLPNIQAV 115
>UniRef50_Q9P0M6 Cluster: Core histone macro-H2A.2; n=74;
Eukaryota|Rep: Core histone macro-H2A.2 - Homo sapiens
(Human)
Length = 372
Score = 67.7 bits (158), Expect = 4e-10
Identities = 33/88 (37%), Positives = 46/88 (52%)
Frame = +2
Query: 137 PMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHILF 316
P+GR + L+ G + RI G ++ KK R+ PRHIL
Sbjct: 24 PVGRLMRYLKKGTFKYRISVGAPVYMAAVIEYLAAEILELAGNAARDNKKARIAPRHILL 83
Query: 317 AIKNDEELSRMMTGVTISQGGVLPAIQP 400
A+ NDEEL++++ GVTI+ GGVLP I P
Sbjct: 84 AVANDEELNQLLKGVTIASGGVLPRIHP 111
>UniRef50_A7R6L6 Cluster: Chromosome undetermined scaffold_1333,
whole genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_1333, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 195
Score = 67.3 bits (157), Expect = 5e-10
Identities = 31/89 (34%), Positives = 49/89 (55%)
Frame = +2
Query: 137 PMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHILF 316
P+ R + L+ G Y+ R+G+G + +K R+IPRH+L
Sbjct: 81 PVSRIDRYLKKGCYSQRVGTGASVYLATVLEYLATEVLELARNAAWDNQKHRIIPRHVLL 140
Query: 317 AIKNDEELSRMMTGVTISQGGVLPAIQPV 403
A++NDEEL +++ GVTI++GGVLP I +
Sbjct: 141 AVRNDEELGKLLAGVTIARGGVLPNINHI 169
>UniRef50_O75367 Cluster: Core histone macro-H2A.1; n=179;
Eukaryota|Rep: Core histone macro-H2A.1 - Homo sapiens
(Human)
Length = 372
Score = 66.1 bits (154), Expect = 1e-09
Identities = 34/88 (38%), Positives = 47/88 (53%)
Frame = +2
Query: 137 PMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHILF 316
P+GR + ++ G+ RIG G ++ KK RV PRHIL
Sbjct: 24 PVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVTPRHILL 83
Query: 317 AIKNDEELSRMMTGVTISQGGVLPAIQP 400
A+ NDEEL++++ GVTI+ GGVLP I P
Sbjct: 84 AVANDEELNQLLKGVTIASGGVLPNIHP 111
>UniRef50_Q4SU60 Cluster: Histone H2A; n=2; Tetraodontidae|Rep:
Histone H2A - Tetraodon nigroviridis (Green puffer)
Length = 258
Score = 64.1 bits (149), Expect = 5e-09
Identities = 27/41 (65%), Positives = 36/41 (87%)
Frame = +2
Query: 281 KKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 403
KKTR+IPRH+ A++NDEEL++++ GVTI+QGGVLP IQ V
Sbjct: 66 KKTRIIPRHLQLAVRNDEELNKLLGGVTIAQGGVLPNIQAV 106
>UniRef50_A2YNE9 Cluster: Histone H2A; n=1; Oryza sativa (indica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
indica (Rice)
Length = 180
Score = 63.7 bits (148), Expect = 6e-09
Identities = 26/41 (63%), Positives = 34/41 (82%)
Frame = +2
Query: 281 KKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 403
KK R+IPRH+L AI+ND+EL +++ GVTI+ GGVLP I PV
Sbjct: 90 KKNRIIPRHVLLAIRNDDELGKLLAGVTIAHGGVLPNINPV 130
>UniRef50_UPI0000DA3FD0 Cluster: PREDICTED: similar to Histone H2A
type 1; n=2; Euarchontoglires|Rep: PREDICTED: similar to
Histone H2A type 1 - Rattus norvegicus
Length = 177
Score = 62.1 bits (144), Expect = 2e-08
Identities = 27/44 (61%), Positives = 37/44 (84%)
Frame = +2
Query: 272 KEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQPV 403
++ KKTR+IPRH+ AI+NDEEL++++ VTI+QGGVLP IQ V
Sbjct: 77 RDNKKTRIIPRHLQLAIRNDEELNKLLGRVTIAQGGVLPNIQAV 120
>UniRef50_A4VD85 Cluster: Putative uncharacterized protein; n=1;
Tetrahymena thermophila SB210|Rep: Putative
uncharacterized protein - Tetrahymena thermophila SB210
Length = 219
Score = 59.3 bits (137), Expect = 1e-07
Identities = 35/88 (39%), Positives = 41/88 (46%)
Frame = -1
Query: 399 GWMAGRTPPCDIVTPVIILLNSSSFLMANRICRGMTLVXXXXXXXXXXXXXXXXXXXXXX 220
G M G+TPP IV + L NSSSFL+AN+IC G LV
Sbjct: 2 GLMLGKTPPSAIVVLAMSLFNSSSFLIANKICLGTILVFLLSLAALPANSRTSAAKYSKT 61
Query: 219 XXXXIGAPEPILGA*LPFLRSLCXLPIG 136
GAP PIL LPF ++L LP G
Sbjct: 62 AAKQTGAPVPILSLYLPFFKNLEILPTG 89
>UniRef50_Q86EU0 Cluster: Histone H2A; n=1; Schistosoma
japonicum|Rep: Histone H2A - Schistosoma japonicum
(Blood fluke)
Length = 156
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/106 (30%), Positives = 47/106 (44%)
Frame = +2
Query: 83 KAHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXX 262
K HT+S + GL + + R H+ ++ G YA R
Sbjct: 14 KKHTKSNRAGLVIS-----VSRVHRYMKKGRYARRTSIAASVYMSAVIEYLVAEVNELSG 68
Query: 263 XXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQP 400
K K+ + PRHI+ ++ND EL+ ++ V IS GGVLP I P
Sbjct: 69 NAAKANKRKTITPRHIMLGVRNDAELNELLKHVHISHGGVLPCIHP 114
>UniRef50_Q54WG6 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 154
Score = 58.0 bits (134), Expect = 3e-07
Identities = 36/106 (33%), Positives = 49/106 (46%)
Frame = +2
Query: 80 PKAHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXX 259
PK+ ES + T P+ R +LLR G +APR+ S
Sbjct: 30 PKSKPESRSARAGI---TFPVSRVDRLLREGRFAPRVESTAPVYLAAVLEYLVFEILELA 86
Query: 260 XXXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAIQ 397
KKTR+ P+HI +A+ ND EL+ + VTI+ GGVLP Q
Sbjct: 87 HNTCSISKKTRITPQHINWAVGNDLELNSLFQHVTIAYGGVLPTPQ 132
>UniRef50_A3CI01 Cluster: Histone H2A; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
japonica (Rice)
Length = 115
Score = 57.6 bits (133), Expect = 4e-07
Identities = 24/41 (58%), Positives = 33/41 (80%)
Frame = +2
Query: 272 KEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAI 394
++ KK R++PRHI A++NDEELSR++ VTI+ GGVLP I
Sbjct: 52 RDNKKNRIVPRHIQLAVRNDEELSRLLGAVTIAAGGVLPNI 92
>UniRef50_Q7PL33 Cluster: Histone H2A; n=1; Drosophila
melanogaster|Rep: Histone H2A - Drosophila melanogaster
(Fruit fly)
Length = 286
Score = 57.2 bits (132), Expect = 5e-07
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Frame = +2
Query: 137 PMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHILF 316
P+GR H+LL GNYA G ++ KTR+IPRH+
Sbjct: 102 PVGRIHRLLWKGNYA--CGCRRPSLPSCRNGISGPEVLELAGNAARDNNKTRIIPRHLHL 159
Query: 317 AIKNDEELSRMMTGVTISQG-GVLPAIQ 397
AI+ND EL+ +++GVTI+QG +LP Q
Sbjct: 160 AIRNDTELNMLLSGVTITQGCSLLPKKQ 187
>UniRef50_A3CGY8 Cluster: Histone H2A; n=1; Oryza sativa (japonica
cultivar-group)|Rep: Histone H2A - Oryza sativa subsp.
japonica (Rice)
Length = 158
Score = 56.8 bits (131), Expect = 7e-07
Identities = 22/38 (57%), Positives = 32/38 (84%)
Frame = +2
Query: 281 KKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAI 394
KKTR++PRHI A++NDEEL++++ G TI+ GGV+P I
Sbjct: 99 KKTRIVPRHIQLAVRNDEELTKLLGGATIASGGVMPNI 136
>UniRef50_Q7PDD4 Cluster: Histone H2A; n=2; Giardia
intestinalis|Rep: Histone H2A - Giardia lamblia ATCC
50803
Length = 124
Score = 54.0 bits (124), Expect = 5e-06
Identities = 27/82 (32%), Positives = 39/82 (47%)
Frame = +2
Query: 137 PMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHILF 316
P+GR H+ LR G YA RI S + + R++P HIL
Sbjct: 24 PIGRIHRHLREGRYAERISSDAPVYLAAVLENVVAEVFREACNHRDKKSQKRIVPNHILT 83
Query: 317 AIKNDEELSRMMTGVTISQGGV 382
A++ D+EL+ + VTI +GGV
Sbjct: 84 ALRKDKELATIFANVTIREGGV 105
>UniRef50_UPI0000498F6A Cluster: histone H2A; n=2; Entamoeba
histolytica HM-1:IMSS|Rep: histone H2A - Entamoeba
histolytica HM-1:IMSS
Length = 159
Score = 53.2 bits (122), Expect = 9e-06
Identities = 32/104 (30%), Positives = 46/104 (44%)
Frame = +2
Query: 83 KAHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXX 262
+ +T S K GL+ P + R H L+ G Y I
Sbjct: 43 RKNTLSKKSGLQFP-----VARIHAALKKGRYGEHINKMASVYLTAVIEYLVAEVLELAG 97
Query: 263 XXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAI 394
K+ KTR+ PRHI A+++D EL+ ++ VTIS GGV P +
Sbjct: 98 GQAKDFHKTRITPRHIQLAVRSDLELNDLLKDVTISYGGVFPNV 141
>UniRef50_P35066 Cluster: Histone H2A; n=40; Trypanosomatidae|Rep:
Histone H2A - Trypanosoma cruzi
Length = 135
Score = 52.4 bits (120), Expect = 2e-05
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 2/88 (2%)
Frame = +2
Query: 137 PMGRXHKLLRNGNYAPRIG-SGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKT-RVIPRHI 310
P+GR LLR G YA RIG SG ++ KK R+ PR +
Sbjct: 28 PVGRVGSLLRRGQYARRIGASGAVYMAAVLEYLTAELLELSVKAASQQAKKPKRLTPRTV 87
Query: 311 LFAIKNDEELSRMMTGVTISQGGVLPAI 394
A+++D++L ++ VT+S+GGV+P++
Sbjct: 88 TLAVRHDDDLGMLLKDVTLSRGGVMPSL 115
>UniRef50_Q23429 Cluster: Histone H2A; n=1; Caenorhabditis
elegans|Rep: Histone H2A - Caenorhabditis elegans
Length = 145
Score = 50.8 bits (116), Expect = 5e-05
Identities = 34/103 (33%), Positives = 47/103 (45%), Gaps = 1/103 (0%)
Frame = +2
Query: 83 KAHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAP-RIGSGXXXXXXXXXXXXXXXXXXXX 259
K + ST+ GL T P+GR H+ LR RI +G
Sbjct: 26 KRISRSTRSGL-----TFPVGRIHRKLRETTRGKQRISAGASVFMAATLEYLTTELMEMS 80
Query: 260 XXXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLP 388
E KK+RV PRH+ AI D+E ++++ VT+ QGGV P
Sbjct: 81 AIAANESKKSRVTPRHLHLAIYGDQETAQLLDKVTLPQGGVTP 123
>UniRef50_Q4QEG6 Cluster: Histone H2A, putative; n=7;
Trypanosomatidae|Rep: Histone H2A, putative - Leishmania
major
Length = 177
Score = 50.0 bits (114), Expect = 8e-05
Identities = 29/87 (33%), Positives = 43/87 (49%), Gaps = 1/87 (1%)
Frame = +2
Query: 137 PMGRXHKLLRNGNYAP-RIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHIL 313
P+GR H L++G Y R G+ K K R+ PRH+L
Sbjct: 75 PVGRIHSRLKDGLYRKQRCGASAAIYCAALLEYLTTEVIELSGAAAKAQKTERIKPRHLL 134
Query: 314 FAIKNDEELSRMMTGVTISQGGVLPAI 394
AI+ DEEL++++ TIS+GGV+P +
Sbjct: 135 LAIRGDEELNQVVK-ATISRGGVVPNV 160
>UniRef50_Q9LD75 Cluster: Histone H2A.2; n=1; Lilium
longiflorum|Rep: Histone H2A.2 - Lilium longiflorum
(Trumpet lily)
Length = 128
Score = 48.4 bits (110), Expect = 3e-04
Identities = 28/101 (27%), Positives = 44/101 (43%)
Frame = +2
Query: 86 AHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXX 265
A T KL A + R L+ G Y R+G+
Sbjct: 10 AGTSRRKLRSEKAALQFSVSRVEYSLKKGRYCRRLGATAPVYLAAVLENLVAEVLEMAAN 69
Query: 266 XXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLP 388
++ K+ + PRHI+ A++ND E++++ GVTIS GV+P
Sbjct: 70 VTEKHKRIVIKPRHIMLAVRNDVEVNKLFHGVTISASGVVP 110
>UniRef50_Q4SU61 Cluster: Chromosome undetermined SCAF14010, whole
genome shotgun sequence; n=10; Tetraodontidae|Rep:
Chromosome undetermined SCAF14010, whole genome shotgun
sequence - Tetraodon nigroviridis (Green puffer)
Length = 176
Score = 47.6 bits (108), Expect = 4e-04
Identities = 31/100 (31%), Positives = 45/100 (45%)
Frame = +1
Query: 121 AGLHFPDGQXTQAPQKRQLRSQDRFRSPDIPRSGSGIPXXXXXXXXXXXXXXNEKDQSHT 300
AGL FP G+ + +K + R R+ +P +G+P ++D H
Sbjct: 22 AGLQFPVGRVHRLLRKGNYAERGRRRA-GVPGGRAGVPDGGDPGAGRQRCPRQQEDAHHP 80
Query: 301 AAYPVRH*KRRGIKQDDDRSDYIAGRSPAGHPARAAT*EN 420
AA +RRG +Q RSD+ GR A HP AA E+
Sbjct: 81 AAPAAGRAQRRGAEQAAGRSDHRPGRRAAQHPGGAAAQED 120
>UniRef50_Q54HW2 Cluster: Histone H2A domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: Histone H2A
domain-containing protein - Dictyostelium discoideum AX4
Length = 260
Score = 47.6 bits (108), Expect = 4e-04
Identities = 26/91 (28%), Positives = 39/91 (42%)
Frame = +2
Query: 131 TSPMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHI 310
T P+ R K++R G + R S + KTR+ P+HI
Sbjct: 140 TFPVSRIEKMIREGRFTKRCSSDAPVFLAAVLEYLTLEILELSITYANQKNKTRITPQHI 199
Query: 311 LFAIKNDEELSRMMTGVTISQGGVLPAIQPV 403
+I D EL+ ++ VTI+ GGV I P+
Sbjct: 200 HLSICCDAELNDLLKNVTIANGGVPKFIHPI 230
>UniRef50_A7PZY1 Cluster: Chromosome chr8 scaffold_41, whole genome
shotgun sequence; n=1; Vitis vinifera|Rep: Chromosome
chr8 scaffold_41, whole genome shotgun sequence - Vitis
vinifera (Grape)
Length = 404
Score = 45.2 bits (102), Expect = 0.002
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +2
Query: 272 KEMKKTRVIPRHILFAIKNDEELSRMMTGVTIS 370
++ KK R+IPRH+L ++NDEEL +++ G TI+
Sbjct: 96 RDNKKNRIIPRHVLSVVRNDEELGKLLAGATIA 128
>UniRef50_A5BU78 Cluster: Putative uncharacterized protein; n=1;
Vitis vinifera|Rep: Putative uncharacterized protein -
Vitis vinifera (Grape)
Length = 306
Score = 45.2 bits (102), Expect = 0.002
Identities = 16/33 (48%), Positives = 26/33 (78%)
Frame = +2
Query: 272 KEMKKTRVIPRHILFAIKNDEELSRMMTGVTIS 370
++ KK R+IPRH+L ++NDEEL +++ G TI+
Sbjct: 213 RDNKKNRIIPRHVLSVVRNDEELGKLLAGATIA 245
>UniRef50_Q71UI9 Cluster: Histone H2AV; n=156; Eukaryota|Rep:
Histone H2AV - Homo sapiens (Human)
Length = 128
Score = 44.0 bits (99), Expect = 0.005
Identities = 31/105 (29%), Positives = 49/105 (46%), Gaps = 1/105 (0%)
Frame = +2
Query: 83 KAHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAP-RIGSGXXXXXXXXXXXXXXXXXXXX 259
KA + S + GL+ P +GR H+ L+ + R+G+
Sbjct: 16 KAVSRSQRAGLQFP-----VGRIHRHLKTRTTSHGRVGATAAVYSAAILEYLTAEVLELA 70
Query: 260 XXXXKEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAI 394
K++K R+ PRH+ AI+ DEEL ++ TI+ GGV+P I
Sbjct: 71 GNASKDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHI 114
>UniRef50_UPI0000EB30ED Cluster: UPI0000EB30ED related cluster; n=1;
Canis lupus familiaris|Rep: UPI0000EB30ED UniRef100
entry - Canis familiaris
Length = 243
Score = 43.6 bits (98), Expect = 0.007
Identities = 24/74 (32%), Positives = 34/74 (45%)
Frame = +2
Query: 137 PMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHILF 316
P+GR + ++ G+ RIG G ++ KK RV PRHIL
Sbjct: 24 PVGRMLRYIKKGHPKYRIGVGAPVYMAAVLEYLTAEILELAGNAARDNKKGRVTPRHILL 83
Query: 317 AIKNDEELSRMMTG 358
A+ NDEEL++ G
Sbjct: 84 AVANDEELNQKKQG 97
>UniRef50_Q12692 Cluster: Histone H2A.Z; n=65; Eukaryota|Rep:
Histone H2A.Z - Saccharomyces cerevisiae (Baker's yeast)
Length = 134
Score = 43.6 bits (98), Expect = 0.007
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 137 PMGRXHKLL-RNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHIL 313
P+GR + L R+ R+GS K++K R+ PRH+
Sbjct: 34 PVGRIKRYLKRHATGRTRVGSKAAIYLTAVLEYLTAEVLELAGNAAKDLKVKRITPRHLQ 93
Query: 314 FAIKNDEELSRMMTGVTISQGGVLPAI 394
AI+ D+EL ++ TI+ GGVLP I
Sbjct: 94 LAIRGDDELDSLIR-ATIASGGVLPHI 119
>UniRef50_UPI000066070E Cluster: Homolog of Homo sapiens "H2A
histone family, member X (H2AFX), mRNA; n=2; Takifugu
rubripes|Rep: Homolog of Homo sapiens "H2A histone
family, member X (H2AFX), mRNA - Takifugu rubripes
Length = 325
Score = 43.2 bits (97), Expect = 0.009
Identities = 29/94 (30%), Positives = 45/94 (47%)
Frame = -3
Query: 421 GFLR*QHGLDGRQDSALRYSHSGHHPA*FLVVFNGEQDMPRYDSGLFHFFCRVRRELQYF 242
G L Q LD Q +AL HS LVV + + + D+ L V +LQ
Sbjct: 197 GLLGQQDSLDVGQHAALSDRHSSQQLVQLLVVAHSQLQVAGDDTSLLVVAGSVSSQLQDL 256
Query: 241 GGEVFQSRCEVYRGSGTDPGSVVAVSEELVXPAH 140
++ Q +V+R +G + S+VA++E+ V AH
Sbjct: 257 SRQILQHSGQVHRSAGANALSIVALAEQPVNTAH 290
>UniRef50_UPI000065E2E3 Cluster: Homolog of Homo sapiens "Histone 1,
H2ai; n=2; Takifugu rubripes|Rep: Homolog of Homo
sapiens "Histone 1, H2ai - Takifugu rubripes
Length = 370
Score = 43.2 bits (97), Expect = 0.009
Identities = 33/114 (28%), Positives = 50/114 (43%), Gaps = 2/114 (1%)
Frame = -3
Query: 433 LVFSGFLR*QHGLDGRQDSALRYSHSGHHPA*FLVVFNGEQDMPRYDSGLFHFFCRVRRE 254
L F L ++ LD Q + L HS LVV + + + R D+ L V +
Sbjct: 238 LGFLSLLGQKNSLDVGQHATLSNGHSSQQLVQLLVVAHSQLQVTRDDTSLLVVAGSVASQ 297
Query: 253 LQYFGGEVFQSRCEVYRGSGTDPGSVVAVSEELVXPAH--RGSEGRHAKTEFCA 98
LQ G++ Q ++ R + TD ++VA E+ V AH S R A C+
Sbjct: 298 LQDLSGQILQHCGQIDRSTSTDALAIVAFPEQPVHTAHWELQSSPRGASLRLCS 351
>UniRef50_A0DGQ5 Cluster: Histone H2A; n=11; Eukaryota|Rep: Histone
H2A - Paramecium tetraurelia
Length = 183
Score = 43.2 bits (97), Expect = 0.009
Identities = 27/87 (31%), Positives = 40/87 (45%), Gaps = 1/87 (1%)
Frame = +2
Query: 137 PMGRXHKLLRNGNYAP-RIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHIL 313
P+GR H+ L+ A R+G+ K+ K R+ PRH+
Sbjct: 81 PVGRIHRYLKQRVSAKNRVGTTSAVYTSAILEYLTAEVLELAGNASKDFKVRRITPRHLQ 140
Query: 314 FAIKNDEELSRMMTGVTISQGGVLPAI 394
AI+ DEEL ++ TI+ GGV+P I
Sbjct: 141 LAIRGDEELD-ILIRATIAGGGVIPHI 166
>UniRef50_Q54LA5 Cluster: Histone H2A; n=1; Dictyostelium discoideum
AX4|Rep: Histone H2A - Dictyostelium discoideum AX4
Length = 143
Score = 42.3 bits (95), Expect = 0.016
Identities = 20/39 (51%), Positives = 26/39 (66%), Gaps = 1/39 (2%)
Frame = +2
Query: 290 RVIPRHILFAIKNDEELSRMM-TGVTISQGGVLPAIQPV 403
R+ PRH+L AIK DEEL ++ TI+ GGV+P I V
Sbjct: 85 RISPRHLLLAIKTDEELDNLIRVSTTIAGGGVIPYIHEV 123
>UniRef50_P48003 Cluster: Histone H2A.Z; n=7; Eukaryota|Rep: Histone
H2A.Z - Schizosaccharomyces pombe (Fission yeast)
Length = 171
Score = 42.3 bits (95), Expect = 0.016
Identities = 20/41 (48%), Positives = 28/41 (68%)
Frame = +2
Query: 272 KEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAI 394
K++K R+ PRH+ AI+ DEEL ++ TI+ GGVLP I
Sbjct: 113 KDLKVKRITPRHLQLAIRGDEELDTLIR-ATIAGGGVLPHI 152
>UniRef50_UPI0000E45ED1 Cluster: PREDICTED: similar to LOC564406
protein; n=1; Strongylocentrotus purpuratus|Rep:
PREDICTED: similar to LOC564406 protein -
Strongylocentrotus purpuratus
Length = 338
Score = 41.5 bits (93), Expect = 0.029
Identities = 19/41 (46%), Positives = 28/41 (68%)
Frame = +2
Query: 272 KEMKKTRVIPRHILFAIKNDEELSRMMTGVTISQGGVLPAI 394
K++K R+ PRH+ AI+ DEEL ++ TI+ GGV+P I
Sbjct: 285 KDLKVKRITPRHLQLAIRGDEELDSLIK-ATIAGGGVIPHI 324
>UniRef50_P59890 Cluster: Histone H2A [Contains: Hipposin]; n=18;
Eumetazoa|Rep: Histone H2A [Contains: Hipposin] -
Hippoglossus hippoglossus (Atlantic halibut)
Length = 52
Score = 41.5 bits (93), Expect = 0.029
Identities = 20/39 (51%), Positives = 27/39 (69%)
Frame = +2
Query: 83 KAHTESTKLGLRVPAFTSPMGRXHKLLRNGNYAPRIGSG 199
KA T S++ GL+ P +GR H+LLR GNYA R+G+G
Sbjct: 14 KAKTRSSRAGLQFP-----VGRVHRLLRKGNYAHRVGAG 47
>UniRef50_Q54HV9 Cluster: Histone H2A domain-containing protein;
n=1; Dictyostelium discoideum AX4|Rep: Histone H2A
domain-containing protein - Dictyostelium discoideum AX4
Length = 286
Score = 39.1 bits (87), Expect = 0.15
Identities = 32/104 (30%), Positives = 42/104 (40%), Gaps = 1/104 (0%)
Frame = +2
Query: 92 TESTKLGLRVPAFTSPMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXXX 271
+ ST+ GL T + R KLLR Y+ R+
Sbjct: 179 SRSTRAGL-----TISVSRVEKLLRGRRYSKRVSPTSCVFLAAVLEYMVLELLELSLNEL 233
Query: 272 KEMKKTRVIP-RHILFAIKNDEELSRMMTGVTISQGGVLPAIQP 400
KK+R I RHI +I D ELS ++ V I GGVL +I P
Sbjct: 234 SLSKKSRRIKNRHINLSILKDVELSALLNDVIICSGGVLSSIHP 277
>UniRef50_A7QA26 Cluster: Chromosome undetermined scaffold_69, whole
genome shotgun sequence; n=1; Vitis vinifera|Rep:
Chromosome undetermined scaffold_69, whole genome
shotgun sequence - Vitis vinifera (Grape)
Length = 494
Score = 36.7 bits (81), Expect = 0.82
Identities = 14/27 (51%), Positives = 22/27 (81%)
Frame = +2
Query: 272 KEMKKTRVIPRHILFAIKNDEELSRMM 352
K+ KK R+I RH+L A++NDEEL +++
Sbjct: 467 KDNKKNRIILRHVLSAMRNDEELGKLL 493
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 36.3 bits (80), Expect = 1.1
Identities = 14/18 (77%), Positives = 16/18 (88%)
Frame = +3
Query: 573 DPDMIRYXDXFGQTTTKL 626
DPDMIRY D FGQTTT++
Sbjct: 346 DPDMIRYIDEFGQTTTRM 363
>UniRef50_A2XQJ2 Cluster: Histone H2A; n=2; Oryza sativa|Rep:
Histone H2A - Oryza sativa subsp. indica (Rice)
Length = 276
Score = 35.9 bits (79), Expect = 1.4
Identities = 14/23 (60%), Positives = 19/23 (82%)
Frame = +2
Query: 272 KEMKKTRVIPRHILFAIKNDEEL 340
++ KK R+IPRH+L AI ND+EL
Sbjct: 100 RDNKKNRIIPRHVLLAICNDDEL 122
>UniRef50_Q388A3 Cluster: Putative uncharacterized protein; n=1;
Trypanosoma brucei|Rep: Putative uncharacterized protein
- Trypanosoma brucei
Length = 1634
Score = 35.1 bits (77), Expect = 2.5
Identities = 13/35 (37%), Positives = 22/35 (62%)
Frame = +3
Query: 144 AGYTSSSETATTLPGSVPEPRYTSQRLWNTSPPKY 248
AGY + + T+P +PEP + S+RLW +S ++
Sbjct: 1071 AGYVDAEDKLKTVPRLLPEPPFHSRRLWTSSGERF 1105
>UniRef50_A2TIR8 Cluster: Receptor for egg jelly protein 9; n=9;
cellular organisms|Rep: Receptor for egg jelly protein 9
- Strongylocentrotus purpuratus (Purple sea urchin)
Length = 2965
Score = 35.1 bits (77), Expect = 2.5
Identities = 15/45 (33%), Positives = 26/45 (57%)
Frame = -3
Query: 238 GEVFQSRCEVYRGSGTDPGSVVAVSEELVXPAHRGSEGRHAKTEF 104
G+V + C ++ SG+DP +++ EE + PA+ G + A EF
Sbjct: 1075 GDVVEPICRIFTSSGSDPQDLISDCEESLIPAYYGPDYPTALREF 1119
>UniRef50_Q8C5V8 Cluster: Adult male testis cDNA, RIKEN full-length
enriched library, clone:4932418E24 product:hypothetical
protein, full insert sequence; n=3; Murinae|Rep: Adult
male testis cDNA, RIKEN full-length enriched library,
clone:4932418E24 product:hypothetical protein, full
insert sequence - Mus musculus (Mouse)
Length = 958
Score = 33.9 bits (74), Expect = 5.8
Identities = 20/63 (31%), Positives = 30/63 (47%), Gaps = 6/63 (9%)
Frame = +3
Query: 87 HTQKAQNSVFACRPSLPRWAGYTSSSETATTLPGSVPE-PRYTSQRLWN-----TSPPKY 248
H+Q+ + A S PR +++ PGS PE PR+ SQR W+ T P +
Sbjct: 405 HSQQHRKKALAEHESCPRRTWTGQGQDSSFPRPGSTPEKPRFFSQRPWSALARQTYPQRT 464
Query: 249 WSS 257
W +
Sbjct: 465 WDA 467
>UniRef50_Q24CD1 Cluster: Core histone H2A/H2B/H3/H4 family protein;
n=2; Tetrahymena thermophila|Rep: Core histone
H2A/H2B/H3/H4 family protein - Tetrahymena thermophila
SB210
Length = 388
Score = 33.9 bits (74), Expect = 5.8
Identities = 20/81 (24%), Positives = 32/81 (39%)
Frame = +2
Query: 137 PMGRXHKLLRNGNYAPRIGSGXXXXXXXXXXXXXXXXXXXXXXXXKEMKKTRVIPRHILF 316
P GR + L+ R+ S K + +R+ P HI
Sbjct: 292 PCGRLRRYLKQACKQFRVSSSCNIYLAGVLEYLAAEVLETAGNIAKNNRLSRINPVHIRE 351
Query: 317 AIKNDEELSRMMTGVTISQGG 379
A +ND EL++ + G I++GG
Sbjct: 352 AFRNDAELNQFVNGTIIAEGG 372
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 644,550,004
Number of Sequences: 1657284
Number of extensions: 10952914
Number of successful extensions: 23520
Number of sequences better than 10.0: 44
Number of HSP's better than 10.0 without gapping: 22769
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23501
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 82801539422
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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