Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_D08
         (909 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7 prot...    26   0.47 
AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.           22   5.8  

>DQ659247-1|ABG47445.1|  980|Tribolium castaneum chitinase 7
           protein.
          Length = 980

 Score = 25.8 bits (54), Expect = 0.47
 Identities = 15/42 (35%), Positives = 21/42 (50%)
 Frame = -1

Query: 132 VKAGTRRPSFVLSVCAFGRXXLLVRT*QKYXRXARSSGGSXE 7
           VK GT +   V+ +  +GR   L  T  K+   A +SGG  E
Sbjct: 318 VKLGTPKEKLVIGMPTYGRTFTLSNT-AKFGVHAPASGGGKE 358


>AY321476-2|AAQ23387.1|  257|Tribolium castaneum Ase protein.
          Length = 257

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 8/29 (27%), Positives = 15/29 (51%)
 Frame = +3

Query: 168 TATTLPGSVPEPRYTSQRLWNTSPPKYWS 254
           T ++   S+P P  T     N +PP +++
Sbjct: 124 TVSSSTSSIPSPSTTDDLSTNPTPPPHYT 152


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 147,659
Number of Sequences: 336
Number of extensions: 2493
Number of successful extensions: 5
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 5
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 5
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)