Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_D05
(1200 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 36 0.075
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 36 0.075
Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical pr... 35 0.13
U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical pr... 31 0.19
U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical pr... 31 0.19
AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like ... 32 0.19
U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical pr... 31 0.19
AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like ... 32 0.19
Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical pr... 33 0.53
Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical p... 31 1.2
Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical p... 31 1.2
Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical pr... 31 1.2
Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical pr... 31 1.2
AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical... 29 1.3
AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical... 31 1.6
AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein p... 31 1.6
AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical ... 31 1.6
U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical pr... 31 2.1
U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical pr... 31 2.1
AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (... 31 2.1
Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical pr... 30 2.8
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.8
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.8
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.8
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 30 3.7
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 30 3.7
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 30 3.7
Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical pr... 25 4.9
U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (gr... 25 4.9
AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen prot... 29 4.9
Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical pr... 25 5.4
Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical pr... 29 8.6
Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical pr... 29 8.6
L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein. 29 8.6
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 29 8.6
AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein. 29 8.6
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 35.5 bits (78), Expect = 0.075
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 933 PPXPPPPPXXFFFFXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPPXXXGGGGG 772
PP PPPPP F PPPPPP G GG
Sbjct: 609 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 662
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 35.5 bits (78), Expect = 0.075
Identities = 17/54 (31%), Positives = 17/54 (31%)
Frame = -1
Query: 933 PPXPPPPPXXFFFFXXXXXXXXXXXXXXXXXXXXXXXXXXPPPPPPXXXGGGGG 772
PP PPPPP F PPPPPP G GG
Sbjct: 435 PPPPPPPPPQSFGMAPISSAAPPPPPPPPPMGLPAVGAGAPPPPPPPPPSGAGG 488
>Z78013-8|CAN99686.1| 373|Caenorhabditis elegans Hypothetical
protein F15B9.10 protein.
Length = 373
Score = 34.7 bits (76), Expect = 0.13
Identities = 15/37 (40%), Positives = 17/37 (45%)
Frame = +3
Query: 705 GXGGGGKKKKXXXPPXXXXXXXPPPPPPXXXGGGGGG 815
G GGGG + + P P PP GGGGGG
Sbjct: 248 GRGGGGNQNRQQVPTNPMGGGGGYPQPPPQQGGGGGG 284
>U58748-9|AAB52969.3| 542|Caenorhabditis elegans Hypothetical
protein ZK180.5a protein.
Length = 542
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 744 PPXXXXXXXPPPPPPXXXGGGGG 812
PP PPPPPP G GGG
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLGGG 80
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGG 770
PPPPPP GG GGG
Sbjct: 66 PPPPPPPAFGGLGGG 80
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 771 PPPPPPXXXGGGGGG 815
PPPPPP GG GGG
Sbjct: 66 PPPPPPPAFGGLGGG 80
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGGXXXXXXXGG 743
PPPPPP G GGG GG
Sbjct: 67 PPPPPPAFGGLGGGAAYPGAGAGG 90
Score = 29.5 bits (63), Expect(2) = 0.19
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 813 PPPPPPXXXGGGGGXXXXXXXXGG 742
PPPPPP G GGG GG
Sbjct: 67 PPPPPPAFGGLGGGAAYPGAGAGG 90
Score = 23.4 bits (48), Expect(2) = 0.19
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 933 PPXPPPPP 910
PP PPPPP
Sbjct: 65 PPPPPPPP 72
>U58748-8|AAM97986.1| 497|Caenorhabditis elegans Hypothetical
protein ZK180.5b protein.
Length = 497
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 744 PPXXXXXXXPPPPPPXXXGGGGG 812
PP PPPPPP G GGG
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLGGG 80
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGG 770
PPPPPP GG GGG
Sbjct: 66 PPPPPPPAFGGLGGG 80
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 771 PPPPPPXXXGGGGGG 815
PPPPPP GG GGG
Sbjct: 66 PPPPPPPAFGGLGGG 80
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGGXXXXXXXGG 743
PPPPPP G GGG GG
Sbjct: 67 PPPPPPAFGGLGGGAAYPGAGAGG 90
Score = 29.5 bits (63), Expect(2) = 0.19
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 813 PPPPPPXXXGGGGGXXXXXXXXGG 742
PPPPPP G GGG GG
Sbjct: 67 PPPPPPAFGGLGGGAAYPGAGAGG 90
Score = 23.4 bits (48), Expect(2) = 0.19
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 933 PPXPPPPP 910
PP PPPPP
Sbjct: 65 PPPPPPPP 72
>AC024847-11|AAO21416.1| 453|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform b protein.
Length = 453
Score = 31.9 bits (69), Expect = 0.93
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 705 GXGGGGKKKKXXXPPXXXXXXXPPPPPPXXXGGGGG 812
G GGG PP PPPPPP GGG G
Sbjct: 50 GGGGGSYAAAPALPP-------PPPPPPAPIGGGAG 78
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 814 PPPPPPXXXGGGGG 773
PPPPPP GGG G
Sbjct: 65 PPPPPPAPIGGGAG 78
Score = 29.5 bits (63), Expect(2) = 0.19
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 813 PPPPPPXXXGGGGG 772
PPPPPP GGG G
Sbjct: 65 PPPPPPAPIGGGAG 78
Score = 23.4 bits (48), Expect(2) = 0.19
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 933 PPXPPPPP 910
PP PPPPP
Sbjct: 63 PPPPPPPP 70
>U58748-7|AAM97987.1| 399|Caenorhabditis elegans Hypothetical
protein ZK180.5c protein.
Length = 399
Score = 30.7 bits (66), Expect = 2.1
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = +3
Query: 744 PPXXXXXXXPPPPPPXXXGGGGG 812
PP PPPPPP G GGG
Sbjct: 58 PPIGYGAPPPPPPPPAFGGLGGG 80
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGG 770
PPPPPP GG GGG
Sbjct: 66 PPPPPPPAFGGLGGG 80
Score = 30.3 bits (65), Expect = 2.8
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 771 PPPPPPXXXGGGGGG 815
PPPPPP GG GGG
Sbjct: 66 PPPPPPPAFGGLGGG 80
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGGXXXXXXXGG 743
PPPPPP G GGG GG
Sbjct: 67 PPPPPPAFGGLGGGAAYPGAGAGG 90
Score = 29.5 bits (63), Expect(2) = 0.19
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 813 PPPPPPXXXGGGGGXXXXXXXXGG 742
PPPPPP G GGG GG
Sbjct: 67 PPPPPPAFGGLGGGAAYPGAGAGG 90
Score = 23.4 bits (48), Expect(2) = 0.19
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 933 PPXPPPPP 910
PP PPPPP
Sbjct: 65 PPPPPPPP 72
>AC024847-10|AAF60859.1| 393|Caenorhabditis elegans Ground-like
(grd related) protein16, isoform a protein.
Length = 393
Score = 31.9 bits (69), Expect = 0.93
Identities = 16/36 (44%), Positives = 16/36 (44%)
Frame = +3
Query: 705 GXGGGGKKKKXXXPPXXXXXXXPPPPPPXXXGGGGG 812
G GGG PP PPPPPP GGG G
Sbjct: 50 GGGGGSYAAAPALPP-------PPPPPPAPIGGGAG 78
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 814 PPPPPPXXXGGGGG 773
PPPPPP GGG G
Sbjct: 65 PPPPPPAPIGGGAG 78
Score = 29.5 bits (63), Expect(2) = 0.19
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 813 PPPPPPXXXGGGGG 772
PPPPPP GGG G
Sbjct: 65 PPPPPPAPIGGGAG 78
Score = 23.4 bits (48), Expect(2) = 0.19
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 933 PPXPPPPP 910
PP PPPPP
Sbjct: 63 PPPPPPPP 70
>Z81053-1|CAB02877.1| 385|Caenorhabditis elegans Hypothetical
protein E02A10.2 protein.
Length = 385
Score = 32.7 bits (71), Expect = 0.53
Identities = 13/24 (54%), Positives = 13/24 (54%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGGXXXXXXXGG 743
PPPPPP GG GGG GG
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGG 77
Score = 31.9 bits (69), Expect = 0.93
Identities = 14/25 (56%), Positives = 14/25 (56%), Gaps = 1/25 (4%)
Frame = -3
Query: 814 PPPPPPXXXGG-GGGGXXXXXXXGG 743
PPPPPP GG GGGG GG
Sbjct: 111 PPPPPPACGGGCGGGGGGCGGGCGG 135
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 771 PPPPPPXXXGGGGGG 815
PPPPPP GG GGG
Sbjct: 54 PPPPPPACGGGCGGG 68
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 771 PPPPPPXXXGGGGGG 815
PPPPPP GG GGG
Sbjct: 111 PPPPPPACGGGCGGG 125
Score = 29.9 bits (64), Expect = 3.7
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -1
Query: 813 PPPPPPXXXGGGGGXXXXXXXXGG 742
PPPPPP GG GG GG
Sbjct: 54 PPPPPPACGGGCGGGGGGCGGGGG 77
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGGXXXXXXXGG 743
PPPPP G GGGG GG
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGGG 78
Score = 29.1 bits (62), Expect = 6.5
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 812 PPPPPXXPXGGGGGXXXXXXXGGG 741
PPPPP G GGG GGG
Sbjct: 55 PPPPPACGGGCGGGGGGCGGGGGG 78
>Z75547-17|CAN99726.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 812 PPPPPXXPXGGGGGXXXXXXXGGG 741
PPPPP P GG G GGG
Sbjct: 217 PPPPPSNPYGGSGNDNGSSGGGGG 240
>Z75547-16|CAA99907.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 812 PPPPPXXPXGGGGGXXXXXXXGGG 741
PPPPP P GG G GGG
Sbjct: 217 PPPPPSNPYGGSGNDNGSSGGGGG 240
>Z74474-5|CAN99697.1| 432|Caenorhabditis elegans Hypothetical
protein K10C8.3c protein.
Length = 432
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 812 PPPPPXXPXGGGGGXXXXXXXGGG 741
PPPPP P GG G GGG
Sbjct: 217 PPPPPSNPYGGSGNDNGSSGGGGG 240
>Z74474-4|CAA98956.2| 445|Caenorhabditis elegans Hypothetical
protein K10C8.3a protein.
Length = 445
Score = 31.5 bits (68), Expect = 1.2
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = -2
Query: 812 PPPPPXXPXGGGGGXXXXXXXGGG 741
PPPPP P GG G GGG
Sbjct: 217 PPPPPSNPYGGSGNDNGSSGGGGG 240
>AL032626-17|CAA21536.1| 282|Caenorhabditis elegans Hypothetical
protein Y37D8A.21 protein.
Length = 282
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 814 PPPPPPXXXGGGGG 773
PPPPPP GG GG
Sbjct: 154 PPPPPPPLMGGSGG 167
Score = 29.5 bits (63), Expect(2) = 1.3
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 813 PPPPPPXXXGGGGG 772
PPPPPP GG GG
Sbjct: 154 PPPPPPPLMGGSGG 167
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 771 PPPPPPXXXGGGGG 812
PPPPPP GG GG
Sbjct: 154 PPPPPPPLMGGSGG 167
Score = 20.6 bits (41), Expect(2) = 1.3
Identities = 6/7 (85%), Positives = 6/7 (85%)
Frame = -1
Query: 930 PXPPPPP 910
P PPPPP
Sbjct: 152 PLPPPPP 158
>AL117204-20|CAB55136.2| 699|Caenorhabditis elegans Hypothetical
protein Y116A8C.32 protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 705 GXGGGGKKKKXXXPPXXXXXXXPPPPPPXXXGG 803
G GGG PP PPPPPP G
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMPG 684
>AJ243905-1|CAB64866.1| 699|Caenorhabditis elegans SF1 protein
protein.
Length = 699
Score = 31.1 bits (67), Expect = 1.6
Identities = 13/33 (39%), Positives = 13/33 (39%)
Frame = +3
Query: 705 GXGGGGKKKKXXXPPXXXXXXXPPPPPPXXXGG 803
G GGG PP PPPPPP G
Sbjct: 652 GSGGGSSMPMPVPPPGGLGGFMPPPPPPPPMPG 684
>AF016446-1|AAC24166.1| 66|Caenorhabditis elegans Hypothetical
protein C02E7.7 protein.
Length = 66
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGG 770
PPPPP GGGGGG
Sbjct: 32 PPPPPACGCGGGGGG 46
Score = 31.1 bits (67), Expect = 1.6
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 771 PPPPPPXXXGGGGGG 815
PPPPP GGGGGG
Sbjct: 32 PPPPPACGCGGGGGG 46
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGG 770
PPPPPP GGGGG
Sbjct: 31 PPPPPPACGCGGGGG 45
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 771 PPPPPPXXXGGGGGG 815
PPPPPP GGGGG
Sbjct: 31 PPPPPPACGCGGGGG 45
>U55366-2|AAA97981.1| 156|Caenorhabditis elegans Hypothetical
protein F41F3.3 protein.
Length = 156
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGG 770
PPPPPP G GGGG
Sbjct: 31 PPPPPPSPCGCGGGG 45
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 771 PPPPPPXXXGGGGGG 815
PPPPPP G GGGG
Sbjct: 31 PPPPPPSPCGCGGGG 45
Score = 28.7 bits (61), Expect = 8.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -3
Query: 814 PPPPPPXXXGGGGG 773
PPPP P GGGGG
Sbjct: 33 PPPPSPCGCGGGGG 46
Score = 28.7 bits (61), Expect = 8.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = -1
Query: 813 PPPPPPXXXGGGGG 772
PPPP P GGGGG
Sbjct: 33 PPPPSPCGCGGGGG 46
Score = 28.7 bits (61), Expect = 8.6
Identities = 10/14 (71%), Positives = 10/14 (71%)
Frame = +3
Query: 771 PPPPPPXXXGGGGG 812
PPPP P GGGGG
Sbjct: 33 PPPPSPCGCGGGGG 46
>U41991-7|AAA83347.1| 255|Caenorhabditis elegans Hypothetical
protein C42D4.3 protein.
Length = 255
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGG 770
PPPPPP GG GGG
Sbjct: 36 PPPPPPMCSGGCGGG 50
Score = 30.7 bits (66), Expect = 2.1
Identities = 11/15 (73%), Positives = 11/15 (73%)
Frame = +3
Query: 771 PPPPPPXXXGGGGGG 815
PPPPPP GG GGG
Sbjct: 36 PPPPPPMCSGGCGGG 50
>AC024790-2|AAF60638.1| 220|Caenorhabditis elegans Ground-like (grd
related) protein 5 protein.
Length = 220
Score = 30.7 bits (66), Expect = 2.1
Identities = 15/32 (46%), Positives = 15/32 (46%)
Frame = +3
Query: 714 GGGKKKKXXXPPXXXXXXXPPPPPPXXXGGGG 809
GGG PP PPPPPP GGGG
Sbjct: 20 GGGSSCGCSAPPAC-----PPPPPPSPCGGGG 46
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -3
Query: 814 PPPPPPXXXGGGG 776
PPPPPP GGGG
Sbjct: 34 PPPPPPSPCGGGG 46
Score = 29.5 bits (63), Expect = 4.9
Identities = 10/13 (76%), Positives = 10/13 (76%)
Frame = -1
Query: 813 PPPPPPXXXGGGG 775
PPPPPP GGGG
Sbjct: 34 PPPPPPSPCGGGG 46
>Z12018-1|CAD88219.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 711 GGGGKKKKXXXPPXXXXXXXPPPPPPXXXGGG 806
GGGG PP PP P P GGG
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>Z11126-8|CAD88221.2| 774|Caenorhabditis elegans Hypothetical
protein ZK643.8 protein.
Length = 774
Score = 30.3 bits (65), Expect = 2.8
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 711 GGGGKKKKXXXPPXXXXXXXPPPPPPXXXGGG 806
GGGG PP PP P P GGG
Sbjct: 291 GGGGYSAPAAAPPPPPPPPPPPAPAPVSSGGG 322
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 744 PPXXXXXXXPPPPPPXXXGGGGGG 815
PP PPPPPP GG GG
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 360 PLXXXXXXXPPXGGGGXXFFSPPXKXKIGGXPPXPEXXPPP 238
P+ PP GG PP GG PP PPP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 744 PPXXXXXXXPPPPPPXXXGGGGGG 815
PP PPPPPP GG GG
Sbjct: 760 PPPPPPGGCPPPPPPPPPGGFKGG 783
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 360 PLXXXXXXXPPXGGGGXXFFSPPXKXKIGGXPPXPEXXPPP 238
P+ PP GG PP GG PP PPP
Sbjct: 721 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 761
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.8
Identities = 12/24 (50%), Positives = 12/24 (50%)
Frame = +3
Query: 744 PPXXXXXXXPPPPPPXXXGGGGGG 815
PP PPPPPP GG GG
Sbjct: 343 PPPPPPGGCPPPPPPPPPGGFKGG 366
Score = 28.7 bits (61), Expect = 8.6
Identities = 14/41 (34%), Positives = 15/41 (36%)
Frame = -1
Query: 360 PLXXXXXXXPPXGGGGXXFFSPPXKXKIGGXPPXPEXXPPP 238
P+ PP GG PP GG PP PPP
Sbjct: 304 PITGGPPPPPPPGGLPPITGGPPPPPPPGGLPPISGGPPPP 344
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 333 PPXGGGGXXFFSPPXKXKIGGXPPXPEXXPPPNXG 229
PP G G F PP G PP P PPP+ G
Sbjct: 83 PPPGMGPPPFMPPPI-----GMPPPPLGMPPPHIG 112
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 333 PPXGGGGXXFFSPPXKXKIGGXPPXPEXXPPPNXG 229
PP G G F PP G PP P PPP+ G
Sbjct: 106 PPPGMGPPPFMPPPI-----GMPPPPLGMPPPHIG 135
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 29.9 bits (64), Expect = 3.7
Identities = 15/35 (42%), Positives = 16/35 (45%)
Frame = -1
Query: 333 PPXGGGGXXFFSPPXKXKIGGXPPXPEXXPPPNXG 229
PP G G F PP G PP P PPP+ G
Sbjct: 356 PPPGMGPPPFMPPPI-----GMPPPPLGMPPPHIG 385
>Z70312-3|CAA94385.1| 172|Caenorhabditis elegans Hypothetical
protein ZC168.5 protein.
Length = 172
Score = 24.6 bits (51), Expect(2) = 4.9
Identities = 8/12 (66%), Positives = 8/12 (66%)
Frame = -1
Query: 813 PPPPPPXXXGGG 778
PPPPPP GG
Sbjct: 54 PPPPPPPSYAGG 65
Score = 23.4 bits (48), Expect(2) = 4.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 933 PPXPPPPP 910
PP PPPPP
Sbjct: 39 PPPPPPPP 46
>U00058-3|AAD31933.1| 162|Caenorhabditis elegans Ground-like (grd
related) protein22 protein.
Length = 162
Score = 24.6 bits (51), Expect(2) = 4.9
Identities = 9/14 (64%), Positives = 9/14 (64%)
Frame = -1
Query: 813 PPPPPPXXXGGGGG 772
PPPPPP G G G
Sbjct: 54 PPPPPPPMCGCGCG 67
Score = 23.4 bits (48), Expect(2) = 4.9
Identities = 7/8 (87%), Positives = 7/8 (87%)
Frame = -1
Query: 933 PPXPPPPP 910
PP PPPPP
Sbjct: 52 PPPPPPPP 59
>AF000198-8|AAP68908.1| 435|Caenorhabditis elegans Collagen protein
51 protein.
Length = 435
Score = 29.5 bits (63), Expect = 4.9
Identities = 12/23 (52%), Positives = 12/23 (52%)
Frame = -2
Query: 809 PPPPXXPXGGGGGXXXXXXXGGG 741
P PP P GGGGG GGG
Sbjct: 312 PCPPRTPAGGGGGGDFPAGGGGG 334
>Z81560-2|CAB04547.1| 1021|Caenorhabditis elegans Hypothetical
protein K02E2.2 protein.
Length = 1021
Score = 25.0 bits (52), Expect(2) = 5.4
Identities = 8/11 (72%), Positives = 8/11 (72%)
Frame = -1
Query: 933 PPXPPPPPXXF 901
PP PPPPP F
Sbjct: 789 PPVPPPPPPPF 799
Score = 22.6 bits (46), Expect(2) = 5.4
Identities = 8/15 (53%), Positives = 8/15 (53%)
Frame = -1
Query: 954 FFFFXXXPPXPPPPP 910
FF PP P PPP
Sbjct: 780 FFALPVPPPPPVPPP 794
>Z79596-2|CAC42251.1| 838|Caenorhabditis elegans Hypothetical
protein C02C6.1b protein.
Length = 838
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +3
Query: 744 PPXXXXXXXPPP---PPPXXXGGGGG 812
PP PPP PPP GGGGG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>Z79596-1|CAB01857.1| 830|Caenorhabditis elegans Hypothetical
protein C02C6.1a protein.
Length = 830
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +3
Query: 744 PPXXXXXXXPPP---PPPXXXGGGGG 812
PP PPP PPP GGGGG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>L29031-1|AAB72228.2| 830|Caenorhabditis elegans dynamin protein.
Length = 830
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +3
Query: 744 PPXXXXXXXPPP---PPPXXXGGGGG 812
PP PPP PPP GGGGG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 28.7 bits (61), Expect = 8.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = -3
Query: 814 PPPPPPXXXGGGGGG 770
PPPPPP GGGG
Sbjct: 511 PPPPPPQSQQAGGGG 525
Score = 28.7 bits (61), Expect = 8.6
Identities = 10/15 (66%), Positives = 10/15 (66%)
Frame = +3
Query: 771 PPPPPPXXXGGGGGG 815
PPPPPP GGGG
Sbjct: 511 PPPPPPQSQQAGGGG 525
>AF167982-1|AAD50438.1| 838|Caenorhabditis elegans dynamin protein.
Length = 838
Score = 28.7 bits (61), Expect = 8.6
Identities = 13/26 (50%), Positives = 13/26 (50%), Gaps = 3/26 (11%)
Frame = +3
Query: 744 PPXXXXXXXPPP---PPPXXXGGGGG 812
PP PPP PPP GGGGG
Sbjct: 782 PPRGGPGAPPPPGMRPPPGAPGGGGG 807
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,485,211
Number of Sequences: 27780
Number of extensions: 365674
Number of successful extensions: 6574
Number of sequences better than 10.0: 37
Number of HSP's better than 10.0 without gapping: 667
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3852
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3297288728
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -