Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_D02
(731 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical p... 36 0.030
AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical ... 33 0.21
Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical pr... 29 3.4
Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical pr... 29 4.5
Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical pr... 28 5.9
Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical pr... 28 5.9
U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical pr... 28 5.9
AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical... 28 5.9
AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical ... 28 5.9
>U53154-11|AAC25848.1| 390|Caenorhabditis elegans Hypothetical
protein C33G8.2 protein.
Length = 390
Score = 35.9 bits (79), Expect = 0.030
Identities = 24/63 (38%), Positives = 25/63 (39%)
Frame = -2
Query: 730 KKKKRKKKXXKXXXKKKKXXKKKKXXXKKXXXXX*XKXKKKXXNPKPPXXXXKXXXKKXX 551
KKKK KKK KKK KKKK K KKK + K K KK
Sbjct: 260 KKKKDKKKNDDDEEDKKKDKKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEKDKKKK 319
Query: 550 XKK 542
KK
Sbjct: 320 DKK 322
Score = 30.7 bits (66), Expect = 1.1
Identities = 20/47 (42%), Positives = 22/47 (46%), Gaps = 1/47 (2%)
Frame = -3
Query: 729 KKKKEKKKX*XXXXKKKKXXKKKKXXKKK-XXXXXXKXKKKKXXTPN 592
KKKK+ K KKK KKKK K+K K KKKK N
Sbjct: 222 KKKKDDKDDDENEDDKKKDKKKKKDDKEKDDDDEEEKDKKKKDKKKN 268
Score = 29.1 bits (62), Expect = 3.4
Identities = 16/41 (39%), Positives = 21/41 (51%)
Frame = -3
Query: 729 KKKKEKKKX*XXXXKKKKXXKKKKXXKKKXXXXXXKXKKKK 607
KKK +KKK ++K+ KKKK KK + KKK
Sbjct: 179 KKKDKKKKKDDNDEEEKEKDKKKKDKKKDDDDDEDENDKKK 219
Score = 29.1 bits (62), Expect = 3.4
Identities = 19/63 (30%), Positives = 25/63 (39%)
Frame = -2
Query: 730 KKKKRKKKXXKXXXKKKKXXKKKKXXXKKXXXXX*XKXKKKXXNPKPPXXXXKXXXKKXX 551
KK K+KKK K ++K KKK KK + +KK K + K
Sbjct: 295 KKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKKKKDDKDDDEDEDKDDK 354
Query: 550 XKK 542
KK
Sbjct: 355 KKK 357
Score = 28.7 bits (61), Expect = 4.5
Identities = 21/63 (33%), Positives = 26/63 (41%)
Frame = -3
Query: 729 KKKKEKKKX*XXXXKKKKXXKKKKXXKKKXXXXXXKXKKKKXXTPNPXXXXXXXXXKKXX 550
KKKK+KKK +++K KKKK K K K KK + KK
Sbjct: 145 KKKKDKKKEEDDEEEEQK-DKKKKDEKNDDDDEEDKKKDKKKKKDDNDEEEKEKDKKKKD 203
Query: 549 XKK 541
KK
Sbjct: 204 KKK 206
Score = 28.3 bits (60), Expect = 5.9
Identities = 20/62 (32%), Positives = 21/62 (33%)
Frame = -2
Query: 727 KKKRKKKXXKXXXKKKKXXKKKKXXXKKXXXXX*XKXKKKXXNPKPPXXXXKXXXKKXXX 548
KKK+K KK KKKK K K KKK K KK
Sbjct: 279 KKKKKDDDDDEDEDNKKKDKKKKKDDKDDEDEEKEKDKKKKDKKKDDDDDDDEKEKKDKK 338
Query: 547 KK 542
KK
Sbjct: 339 KK 340
>AC006642-4|AAF39830.1| 257|Caenorhabditis elegans Hypothetical
protein F49H12.5 protein.
Length = 257
Score = 33.1 bits (72), Expect = 0.21
Identities = 24/71 (33%), Positives = 30/71 (42%)
Frame = -2
Query: 730 KKKKRKKKXXKXXXKKKKXXKKKKXXXKKXXXXX*XKXKKKXXNPKPPXXXXKXXXKKXX 551
++KK KKK K KK+K KKK KK K KK K K +K
Sbjct: 190 EEKKDKKKDEKKEEKKEKKEDKKKDEKKKDK----KKEDKKDKKDKKDKKDKKDKKEKKD 245
Query: 550 XKKXXXXKKKK 518
KK KK++
Sbjct: 246 DKKSKKNKKEE 256
Score = 31.5 bits (68), Expect = 0.64
Identities = 17/41 (41%), Positives = 21/41 (51%)
Frame = -3
Query: 729 KKKKEKKKX*XXXXKKKKXXKKKKXXKKKXXXXXXKXKKKK 607
+KKK+KKK K KK K KK K+K K KK+
Sbjct: 215 EKKKDKKKEDKKDKKDKKDKKDKKDKKEKKDDKKSKKNKKE 255
Score = 29.5 bits (63), Expect = 2.6
Identities = 20/69 (28%), Positives = 28/69 (40%)
Frame = -3
Query: 726 KKKEKKKX*XXXXKKKKXXKKKKXXKKKXXXXXXKXKKKKXXTPNPXXXXXXXXXKKXXX 547
+KKE+KK +KK K++K KKK K +KK+ + KK
Sbjct: 170 EKKEEKKEEAKKEEKKVEKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKKDKKKEDKKDKK 229
Query: 546 KKXXXXKKK 520
K KK
Sbjct: 230 DKKDKKDKK 238
Score = 29.1 bits (62), Expect = 3.4
Identities = 20/70 (28%), Positives = 27/70 (38%)
Frame = -3
Query: 729 KKKKEKKKX*XXXXKKKKXXKKKKXXKKKXXXXXXKXKKKKXXTPNPXXXXXXXXXKKXX 550
++KKE+ K +KK+ K KK +KK K KKK K
Sbjct: 173 EEKKEEAKKEEKKVEKKEEKKDKKKDEKKEEKKEKKEDKKKDEKKKDKKKEDKKDKKDKK 232
Query: 549 XKKXXXXKKK 520
KK KK+
Sbjct: 233 DKKDKKDKKE 242
>Z32683-1|CAA83621.1| 812|Caenorhabditis elegans Hypothetical
protein R07E5.1 protein.
Length = 812
Score = 29.1 bits (62), Expect = 3.4
Identities = 14/29 (48%), Positives = 16/29 (55%)
Frame = -2
Query: 730 KKKKRKKKXXKXXXKKKKXXKKKKXXXKK 644
K K+KKK K KKKK K KK +K
Sbjct: 759 KNMKKKKKDKKEKEKKKKSKKSKKSKKEK 787
>Z93389-5|CAI79177.1| 212|Caenorhabditis elegans Hypothetical
protein T13F3.8 protein.
Length = 212
Score = 28.7 bits (61), Expect = 4.5
Identities = 18/70 (25%), Positives = 30/70 (42%)
Frame = -3
Query: 729 KKKKEKKKX*XXXXKKKKXXKKKKXXKKKXXXXXXKXKKKKXXTPNPXXXXXXXXXKKXX 550
KK++EKK+ +KK+ KK++ +++ + +KKK KK
Sbjct: 91 KKEEEKKEEEKKKEEKKEEEKKEEVKEEEKKDDSKRDEKKKDGEKKEDDENKEDNEKKKE 150
Query: 549 XKKXXXXKKK 520
KK KK
Sbjct: 151 EKKEDEKPKK 160
>Z35599-2|CAD91629.2| 584|Caenorhabditis elegans Hypothetical
protein F25F2.1b protein.
Length = 584
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -3
Query: 729 KKKKEKKKX*XXXXKKKKXXKKKKXXKKKXXXXXXKXKKKKXXT 598
KKK +KKK KK KK K KKK K + + T
Sbjct: 12 KKKADKKKKEKSTQKKNSLEKKNKKDKKKQKERKKKKEARDSST 55
>Z35599-1|CAA84659.2| 581|Caenorhabditis elegans Hypothetical
protein F25F2.1a protein.
Length = 581
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/44 (36%), Positives = 19/44 (43%)
Frame = -3
Query: 729 KKKKEKKKX*XXXXKKKKXXKKKKXXKKKXXXXXXKXKKKKXXT 598
KKK +KKK KK KK K KKK K + + T
Sbjct: 12 KKKADKKKKEKSTQKKNSLEKKNKKDKKKQKERKKKKEARDSST 55
>U49945-4|AAC47924.1| 535|Caenorhabditis elegans Hypothetical
protein C02H7.1 protein.
Length = 535
Score = 28.3 bits (60), Expect = 5.9
Identities = 15/41 (36%), Positives = 22/41 (53%)
Frame = -3
Query: 729 KKKKEKKKX*XXXXKKKKXXKKKKXXKKKXXXXXXKXKKKK 607
KKKK+ KK +++K KK+ KK+ K +KKK
Sbjct: 122 KKKKKVKKEDKKGDEEEKSTTKKRSSKKETHEEKEKSEKKK 162
>AL110500-21|CAI79283.1| 197|Caenorhabditis elegans Hypothetical
protein Y87G2A.20 protein.
Length = 197
Score = 28.3 bits (60), Expect = 5.9
Identities = 16/40 (40%), Positives = 19/40 (47%)
Frame = -3
Query: 729 KKKKEKKKX*XXXXKKKKXXKKKKXXKKKXXXXXXKXKKK 610
+K + KKK KK+K KK KKK K KKK
Sbjct: 39 RKAQMKKKWTKTAQKKRKERKKADKAKKKTKKDAAKRKKK 78
Score = 28.3 bits (60), Expect = 5.9
Identities = 17/46 (36%), Positives = 21/46 (45%)
Frame = -2
Query: 730 KKKKRKKKXXKXXXKKKKXXKKKKXXXKKXXXXX*XKXKKKXXNPK 593
KK+K +KK K K KK K+K K K +KK PK
Sbjct: 53 KKRKERKKADKAKKKTKKDAAKRKKKSKDKKKKQ--KAQKKAEKPK 96
>AC006627-3|AAK85461.1| 504|Caenorhabditis elegans Hypothetical
protein E01A2.4 protein.
Length = 504
Score = 28.3 bits (60), Expect = 5.9
Identities = 14/28 (50%), Positives = 16/28 (57%)
Frame = -2
Query: 730 KKKKRKKKXXKXXXKKKKXXKKKKXXXK 647
KKKK+ KK K KKK K+KK K
Sbjct: 291 KKKKKVKKSKKSKKDKKKEKKEKKKSKK 318
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 4,050,394
Number of Sequences: 27780
Number of extensions: 47492
Number of successful extensions: 908
Number of sequences better than 10.0: 9
Number of HSP's better than 10.0 without gapping: 229
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 493
length of database: 12,740,198
effective HSP length: 80
effective length of database: 10,517,798
effective search space used: 1714401074
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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