Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_C24
(906 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical p... 264 5e-71
Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical pr... 264 5e-71
Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical p... 33 0.28
Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical p... 33 0.28
Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical p... 33 0.28
Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical pr... 33 0.28
Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical pr... 33 0.28
X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein. 33 0.28
AF125971-7|AAD14768.2| 519|Caenorhabditis elegans Hypothetical ... 29 3.5
AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi dom... 29 6.0
>Z70311-11|CAA94380.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 264 bits (648), Expect = 5e-71
Identities = 116/179 (64%), Positives = 147/179 (82%)
Frame = +1
Query: 151 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVIGATSLDDMV 330
EADIA+IGLAVMGQNLILNMND G+ VCAFNRTV V++FL NEAKGTK+IGA S+++M
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 331 SKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGIL 510
KLKRPR++++L+KAG VD + ++P L +GDIIIDGGNS+Y D+ + ++L+ GI+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 511 YVGMGVSGGEDGARYGPSLMPGGHPAAWPHIKEIFQAICAKANDEPCCDWVGEDGXRPF 687
+VG GVSGGE+GAR+GPSLMPGG+P AWPH+K+IFQ I AK+N EPCCDWVG G F
Sbjct: 123 FVGCGVSGGEEGARFGPSLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDWVGNAGSGHF 181
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = +2
Query: 680 GHFVKMVHNGIEYGDMQLICEAYHLMKDVIGIEQDEMAXFL 802
GHFVKMVHNGIEYGDMQLI EAYHL+ + + D+MA L
Sbjct: 179 GHFVKMVHNGIEYGDMQLIAEAYHLLSKAVELNHDQMAEVL 219
>Z70306-6|CAA94326.1| 484|Caenorhabditis elegans Hypothetical
protein T25B9.9 protein.
Length = 484
Score = 264 bits (648), Expect = 5e-71
Identities = 116/179 (64%), Positives = 147/179 (82%)
Frame = +1
Query: 151 EADIALIGLAVMGQNLILNMNDKGYVVCAFNRTVSKVEEFLKNEAKGTKVIGATSLDDMV 330
EADIA+IGLAVMGQNLILNMND G+ VCAFNRTV V++FL NEAKGTK+IGA S+++M
Sbjct: 3 EADIAVIGLAVMGQNLILNMNDHGFTVCAFNRTVKLVDDFLANEAKGTKIIGAHSIEEMC 62
Query: 331 SKLKRPRKIVLLVKAGFAVDEFVKKLIPLLSKGDIIIDGGNSQYLDTQKWCKELSGTGIL 510
KLKRPR++++L+KAG VD + ++P L +GDIIIDGGNS+Y D+ + ++L+ GI+
Sbjct: 63 KKLKRPRRVMMLIKAGTPVDMMIDAIVPHLEEGDIIIDGGNSEYTDSNRRSEQLAAKGIM 122
Query: 511 YVGMGVSGGEDGARYGPSLMPGGHPAAWPHIKEIFQAICAKANDEPCCDWVGEDGXRPF 687
+VG GVSGGE+GAR+GPSLMPGG+P AWPH+K+IFQ I AK+N EPCCDWVG G F
Sbjct: 123 FVGCGVSGGEEGARFGPSLMPGGNPKAWPHLKDIFQKIAAKSNGEPCCDWVGNAGSGHF 181
Score = 66.5 bits (155), Expect = 2e-11
Identities = 28/41 (68%), Positives = 32/41 (78%)
Frame = +2
Query: 680 GHFVKMVHNGIEYGDMQLICEAYHLMKDVIGIEQDEMAXFL 802
GHFVKMVHNGIEYGDMQLI EAYHL+ + + D+MA L
Sbjct: 179 GHFVKMVHNGIEYGDMQLIAEAYHLLSKAVELNHDQMAEVL 219
>Z73899-13|CAM35841.1| 6629|Caenorhabditis elegans Hypothetical
protein ZK617.1c protein.
Length = 6629
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 364 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 501
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1004 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1050
>Z73899-11|CAA98082.2| 7158|Caenorhabditis elegans Hypothetical
protein ZK617.1b protein.
Length = 7158
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 364 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 501
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1533 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1579
>Z73899-10|CAA98081.2| 6839|Caenorhabditis elegans Hypothetical
protein ZK617.1a protein.
Length = 6839
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 364 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 501
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1214 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1260
>Z73897-6|CAM35838.1| 6629|Caenorhabditis elegans Hypothetical protein
ZK617.1c protein.
Length = 6629
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 364 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 501
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1004 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1050
>Z73897-5|CAA98065.2| 7158|Caenorhabditis elegans Hypothetical protein
ZK617.1b protein.
Length = 7158
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 364 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 501
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1533 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1579
>Z73897-4|CAA98064.2| 6839|Caenorhabditis elegans Hypothetical protein
ZK617.1a protein.
Length = 6839
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 364 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 501
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 1214 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 1260
>X15423-1|CAA33463.1| 6048|Caenorhabditis elegans twitchin protein.
Length = 6048
Score = 33.1 bits (72), Expect = 0.28
Identities = 17/47 (36%), Positives = 27/47 (57%), Gaps = 1/47 (2%)
Frame = +1
Query: 364 LVKAGFAVDEFVKKLIPLLSKGDII-IDGGNSQYLDTQKWCKELSGT 501
++K G +DE ++KL+ ++ K D+ I N Q DT KW EL +
Sbjct: 423 ILKNGKPIDEEMRKLVEVIIKDDVAEIVFKNPQLADTGKWALELGNS 469
>AF125971-7|AAD14768.2| 519|Caenorhabditis elegans Hypothetical
protein Y4C6B.6 protein.
Length = 519
Score = 29.5 bits (63), Expect = 3.5
Identities = 12/45 (26%), Positives = 24/45 (53%)
Frame = -1
Query: 693 LTKWPGXIFTDPVTARFIISFSAYGLENFFYMRPCSRMPTRHQRW 559
L WP I TDP A+++ + + E+F + P + + H+++
Sbjct: 310 LPHWPNVILTDPTAAQYVHGIAIHWYEDF--IDPATVLTETHEKF 352
>AC006708-23|AAF60414.1| 975|Caenorhabditis elegans Paz/piwi
domain-containing protein2 protein.
Length = 975
Score = 28.7 bits (61), Expect = 6.0
Identities = 14/47 (29%), Positives = 27/47 (57%)
Frame = +1
Query: 415 LLSKGDIIIDGGNSQYLDTQKWCKELSGTGILYVGMGVSGGEDGARY 555
+++K ++ + G N YLDT+ + +E L +G+G+S G +Y
Sbjct: 655 VINKTNVKLGGSNYVYLDTKNFLQE-----HLIIGVGISSPPPGTKY 696
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,680,813
Number of Sequences: 27780
Number of extensions: 405032
Number of successful extensions: 1091
Number of sequences better than 10.0: 11
Number of HSP's better than 10.0 without gapping: 1057
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1090
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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