Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_C23
         (981 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

07_03_0154 + 14509979-14512033                                         30   3.2  
03_06_0722 - 35751490-35754357                                         28   9.9  

>07_03_0154 + 14509979-14512033
          Length = 684

 Score = 29.9 bits (64), Expect = 3.2
 Identities = 14/29 (48%), Positives = 14/29 (48%)
 Frame = -3

Query: 427 PKSXPKSPXXLPGSLMHXXXPTPPPXPDP 341
           PKS P SP   P  L     P PPP P P
Sbjct: 34  PKSEPASPERGPLPLPAAAPPPPPPPPPP 62


>03_06_0722 - 35751490-35754357
          Length = 955

 Score = 28.3 bits (60), Expect = 9.9
 Identities = 15/45 (33%), Positives = 18/45 (40%)
 Frame = -3

Query: 487 VPXTRTXXXXXXASEXGEGXPKSXPKSPXXLPGSLMHXXXPTPPP 353
           VP  +       A E      +   K+   LPGSLM    P PPP
Sbjct: 111 VPAPKPSNFQSHAGEYTPERLRELQKNARPLPGSLMRAPPPPPPP 155


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,501,616
Number of Sequences: 37544
Number of extensions: 214455
Number of successful extensions: 857
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 651
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 837
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2858396560
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)