Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_C16
(899 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
03_02_0478 + 8775892-8776377 38 0.008
03_02_0485 - 8808139-8808618 38 0.011
03_02_0484 + 8805053-8805538 38 0.014
03_02_0483 - 8804021-8804485 38 0.014
01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457 37 0.025
01_01_0229 - 1943473-1943922 36 0.033
01_01_0231 + 1951047-1951499 36 0.044
03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015 33 0.23
01_01_0227 + 1933247-1933699 33 0.23
01_05_0636 + 23852985-23853142,23853253-23853445,23853910-238540... 33 0.31
05_03_0545 - 15244647-15245147,15245342-15245635 31 0.94
07_01_1102 - 10129913-10130025,10130558-10130650,10130824-101309... 30 2.9
07_01_1127 + 10456895-10457388,10457488-10458112 29 5.0
11_06_0022 + 19321886-19321918,19323059-19323131,19323587-193236... 29 6.7
09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786 29 6.7
09_03_0036 + 11772940-11773171,11774995-11775104 29 6.7
04_01_0252 - 3329712-3331061 29 6.7
03_01_0491 + 3720842-3720958,3721904-3723109 28 8.8
02_02_0489 + 10869482-10871218 28 8.8
>03_02_0478 + 8775892-8776377
Length = 161
Score = 38.3 bits (85), Expect = 0.008
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 364 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 519
DV EE+ V+ DG I+ + G+ EEK DQ + R +F RR+ LP+ E
Sbjct: 70 DVPGLKKEEVKVEVDDGNILQISGERNKEQEEKTDQWHRVERSSGKFLRRFRLPDNAKPE 129
Query: 520 SVESRLSSDGVLSVIAP 570
+++ + +GVL+V P
Sbjct: 130 QIKASM-ENGVLTVTVP 145
>03_02_0485 - 8808139-8808618
Length = 159
Score = 37.9 bits (84), Expect = 0.011
Identities = 26/77 (33%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 364 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 519
DV EE+ V+ DG I+ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 68 DVPGLKKEEVKVEVDDGNILQISGERSREQEEKSDKWHRVERSSGKFLRRFRLPENTKPE 127
Query: 520 SVESRLSSDGVLSVIAP 570
+++ + +GVL+V P
Sbjct: 128 QIKASM-ENGVLTVTVP 143
>03_02_0484 + 8805053-8805538
Length = 161
Score = 37.5 bits (83), Expect = 0.014
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 364 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 519
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 70 DVPGLKKEEVKVEVEDGNVLQISGERSKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 129
Query: 520 SVESRLSSDGVLSVIAP 570
+++ + +GVL+V P
Sbjct: 130 QIKASM-ENGVLTVTVP 145
>03_02_0483 - 8804021-8804485
Length = 154
Score = 37.5 bits (83), Expect = 0.014
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 364 DVQHFAPEEISVKTADGYIV-VEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 519
DV EE+ V+ DG ++ + G+ EEK D+ + R +F RR+ LPE E
Sbjct: 63 DVPGLKKEEVKVEVEDGNVLQISGERIKEQEEKTDKWHRVERSSGKFLRRFRLPENTKPE 122
Query: 520 SVESRLSSDGVLSVIAP 570
+++ + +GVL+V P
Sbjct: 123 QIKASM-ENGVLTVTVP 138
>01_01_0230 - 1946079-1946786,1946981-1947141,1948010-1948457
Length = 438
Score = 36.7 bits (81), Expect = 0.025
Identities = 25/77 (32%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 364 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 519
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 520 SVESRLSSDGVLSVIAP 570
V++ L +GVL+V P
Sbjct: 119 QVKAGL-ENGVLTVTVP 134
>01_01_0229 - 1943473-1943922
Length = 149
Score = 36.3 bits (80), Expect = 0.033
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 364 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 519
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 58 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 117
Query: 520 SVESRLSSDGVLSVIAP 570
V++ + +GVL+V P
Sbjct: 118 QVKASM-ENGVLTVTVP 133
>01_01_0231 + 1951047-1951499
Length = 150
Score = 35.9 bits (79), Expect = 0.044
Identities = 24/77 (31%), Positives = 41/77 (53%), Gaps = 8/77 (10%)
Frame = +1
Query: 364 DVQHFAPEEISVKTADGYI-VVEGKH----EEKKDQHGYISR---QFTRRYALPEGCTAE 519
D+ EE+ V+ +G + V+ G+ E+K D+ + R QF RR+ LPE +
Sbjct: 59 DLPGVKKEEVKVEVEEGNVLVISGQRSKEKEDKNDKWHRVERSSGQFMRRFRLPENAKVD 118
Query: 520 SVESRLSSDGVLSVIAP 570
V++ + +GVL+V P
Sbjct: 119 QVKAGM-ENGVLTVTVP 134
>03_02_0345 + 7664564-7665277,7665672-7665921,7665996-7666015
Length = 327
Score = 33.5 bits (73), Expect = 0.23
Identities = 22/91 (24%), Positives = 43/91 (47%), Gaps = 10/91 (10%)
Frame = +1
Query: 328 IKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGKHEEKKDQ------HGYISRQ---- 477
+ D + ++ D+ + EE+ V D +V+ G+H++++ + G+ +
Sbjct: 137 VMEDDKEVRMRFDMPGLSREEVKVMVEDDALVIRGEHKKEEGEGAEGSGDGWWKERSVSS 196
Query: 478 FTRRYALPEGCTAESVESRLSSDGVLSVIAP 570
+ R ALP+ C V + L +GVL V P
Sbjct: 197 YDMRLALPDECDKSKVRAEL-KNGVLLVTVP 226
>01_01_0227 + 1933247-1933699
Length = 150
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/49 (34%), Positives = 28/49 (57%)
Frame = +1
Query: 424 VEGKHEEKKDQHGYISRQFTRRYALPEGCTAESVESRLSSDGVLSVIAP 570
V+GK++E+ S +F RR+ LP G + V + + +GVL+V P
Sbjct: 87 VDGKNDERWHHVERSSGKFQRRFRLPRGARVDQVSASM-DNGVLTVTVP 134
>01_05_0636 +
23852985-23853142,23853253-23853445,23853910-23854033,
23854285-23854637,23855525-23856530,23856892-23857085,
23857238-23857324
Length = 704
Score = 33.1 bits (72), Expect = 0.31
Identities = 16/57 (28%), Positives = 27/57 (47%)
Frame = -1
Query: 353 WNLSLSLLMLEPKVSSRGSKVTPRAVVFSAHKGAGCSTEKIFRSQPQAEMLIHEATR 183
W L+L L+ + K S+V P+ + S S K+F + P ++ IH A +
Sbjct: 647 WRLTLPALLSQDKRIDEDSQVEPQISLLSEEDDPVTSVRKLFMTPPSKKLRIHRAEK 703
>05_03_0545 - 15244647-15245147,15245342-15245635
Length = 264
Score = 31.5 bits (68), Expect = 0.94
Identities = 14/25 (56%), Positives = 17/25 (68%)
Frame = -2
Query: 439 RVCLQPRCSRPPF*QRFLPGRNAGR 365
R CLQPR SRPP ++F GR+ R
Sbjct: 221 RDCLQPRQSRPPHYRQFTRGRHPNR 245
>07_01_1102 -
10129913-10130025,10130558-10130650,10130824-10130931,
10131136-10131237,10132064-10132103
Length = 151
Score = 29.9 bits (64), Expect = 2.9
Identities = 23/76 (30%), Positives = 38/76 (50%), Gaps = 4/76 (5%)
Frame = -3
Query: 480 ELTRYVTMLIFLLLVFAFNHDVAVRRFNRDFFRGEMLDVQVYLE----LILVTFDAGAQG 313
E V++LI L+++FA + + FNR ++ ++V ++ +I D GA G
Sbjct: 15 EAPNSVSLLIVLIILFAPENPTIWKEFNRKESTRQLELLRVGIKNGGMVISDRVDGGASG 74
Query: 312 LEPRQQGDATGGSILC 265
PR QG A+G C
Sbjct: 75 SSPR-QGGASGVKTEC 89
>07_01_1127 + 10456895-10457388,10457488-10458112
Length = 372
Score = 29.1 bits (62), Expect = 5.0
Identities = 13/25 (52%), Positives = 16/25 (64%)
Frame = -2
Query: 439 RVCLQPRCSRPPF*QRFLPGRNAGR 365
R CLQPR SRPP ++F R+ R
Sbjct: 329 RDCLQPRQSRPPHYRQFTRSRHPNR 353
>11_06_0022 +
19321886-19321918,19323059-19323131,19323587-19323680,
19324383-19324499,19324584-19324641,19324713-19325114
Length = 258
Score = 28.7 bits (61), Expect = 6.7
Identities = 19/45 (42%), Positives = 21/45 (46%)
Frame = +1
Query: 484 RRYALPEGCTAESVESRLSSDGVLSVIAPGRCRQQWRVNARFRSP 618
RR ALP G E+ ESR S V S R R + R R R P
Sbjct: 105 RRKALPNGSDPENEESRSSKMAVRSANISPRGRGRGRGRGRGRPP 149
>09_06_0356 - 22498300-22498350,22499251-22499425,22499543-22500786
Length = 489
Score = 28.7 bits (61), Expect = 6.7
Identities = 15/32 (46%), Positives = 18/32 (56%)
Frame = +2
Query: 386 KKSLLKRRTATSWLKANTRRRKISMVTYRVNS 481
KKS T TS K TRRRK+++V Y S
Sbjct: 16 KKSAAGELTTTSEKKKKTRRRKVAVVYYLCRS 47
>09_03_0036 + 11772940-11773171,11774995-11775104
Length = 113
Score = 28.7 bits (61), Expect = 6.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 384 GRNLC*NGGRLHRG*RQTRGEERSAWLH 467
G+NL G+ H G R+ RG+ER LH
Sbjct: 21 GQNLMDRRGKRHEGRRERRGKERGRNLH 48
>04_01_0252 - 3329712-3331061
Length = 449
Score = 28.7 bits (61), Expect = 6.7
Identities = 12/25 (48%), Positives = 17/25 (68%)
Frame = -2
Query: 439 RVCLQPRCSRPPF*QRFLPGRNAGR 365
R CLQPR +RPP ++F R++ R
Sbjct: 406 RDCLQPRQNRPPHYRQFTRSRHSNR 430
>03_01_0491 + 3720842-3720958,3721904-3723109
Length = 440
Score = 28.3 bits (60), Expect = 8.8
Identities = 12/33 (36%), Positives = 18/33 (54%)
Frame = -1
Query: 266 AHKGAGCSTEKIFRSQPQAEMLIHEATRTLNFV 168
A G GC K+F S+ +A+ H A +L F+
Sbjct: 391 ADHGRGCKLAKVFESKDEAKASTHTAISSLPFM 423
>02_02_0489 + 10869482-10871218
Length = 578
Score = 28.3 bits (60), Expect = 8.8
Identities = 19/62 (30%), Positives = 30/62 (48%), Gaps = 1/62 (1%)
Frame = +1
Query: 313 TLGSSIKSDKDKFQVNLDVQHFAPEEISVKTADGYIVVEGK-HEEKKDQHGYISRQFTRR 489
TL S K D +++ D P+E + T +G I+ G+ H+EK D+ + R
Sbjct: 443 TLVGSKKGKADNGKLDGDTHSVMPKEATAGTQNGGILTGGENHKEKVDKDANVP-SIRRE 501
Query: 490 YA 495
YA
Sbjct: 502 YA 503
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,035,421
Number of Sequences: 37544
Number of extensions: 414483
Number of successful extensions: 1207
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1171
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1207
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2542098580
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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