BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_C15
(905 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical pr... 192 2e-49
U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical pr... 178 4e-45
U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical pr... 178 4e-45
AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical ... 172 3e-43
AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical... 172 3e-43
Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical pr... 163 2e-40
U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical pr... 31 1.1
U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead transc... 29 6.0
U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead transc... 29 6.0
U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical pr... 28 8.0
U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical pr... 28 8.0
AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical ... 28 8.0
AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical ... 28 8.0
>Z75714-4|CAB00062.1| 360|Caenorhabditis elegans Hypothetical
protein ZC434.8 protein.
Length = 360
Score = 192 bits (469), Expect = 2e-49
Identities = 89/140 (63%), Positives = 113/140 (80%), Gaps = 3/140 (2%)
Frame = +1
Query: 220 KNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFKKTDKH 399
K+KKT G+TLLD IQSG ENLDSGVGIYAPDAESY++FA+LF+P+IE+YHNGFK TD
Sbjct: 41 KSKKTRLGATLLDVIQSGGENLDSGVGIYAPDAESYTLFADLFNPVIEEYHNGFKATDTQ 100
Query: 400 PPKNWGD--VDTLGNLDPAGEFVVSTRVRCGRSLEGYPFNPXLTESQYKEMEDKVSGTLS 573
P + G+ V L +LDP G+F+VSTR+RCGRSL+GYPFNP L+E+ YK ME ++ +
Sbjct: 101 PAMDLGEKNVGELADLDPEGKFIVSTRIRCGRSLQGYPFNPCLSETNYKMMETRMKEIFN 160
Query: 574 SL-EGELKGTFYPLTGMSKE 630
S+ + ELKGT+YPLTGM +E
Sbjct: 161 SITDPELKGTYYPLTGMDEE 180
Score = 72.5 bits (170), Expect = 4e-13
Identities = 32/59 (54%), Positives = 40/59 (67%), Gaps = 1/59 (1%)
Frame = +3
Query: 708 RFWPTGRGIYHNENKTFLVWCNEEDXLRIISMQMGGTCXR-XQKVVNXVNXIKXKSXXA 881
R+WP GRGI+HNE KTFLVW NEED LRIISMQ GG +++ +N + K+ A
Sbjct: 206 RYWPNGRGIFHNEKKTFLVWVNEEDHLRIISMQNGGNVGEVLARLIKGLNLVAAKAPFA 264
Score = 37.1 bits (82), Expect = 0.017
Identities = 18/28 (64%), Positives = 21/28 (75%), Gaps = 3/28 (10%)
Frame = +2
Query: 635 QQQLIDXHFLFKEGXRFLXAANA---WP 709
+++LI HFLFKEG RFL AANA WP
Sbjct: 182 KKKLIADHFLFKEGDRFLKAANANRYWP 209
>U41543-2|AAO21426.1| 359|Caenorhabditis elegans Hypothetical
protein F46H5.3b protein.
Length = 359
Score = 178 bits (434), Expect = 4e-45
Identities = 84/145 (57%), Positives = 107/145 (73%), Gaps = 3/145 (2%)
Frame = +1
Query: 205 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 384
V D LK+KKT G+ LLD IQSGV NLDSGVG+YAPDAE+Y++F LFDP+I+DYHNGF
Sbjct: 36 VVDQLKDKKTKLGANLLDVIQSGVANLDSGVGVYAPDAEAYTLFKPLFDPLIQDYHNGFA 95
Query: 385 KTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNPXLTESQYKEMEDKV 558
K P + G+ T L +LDP G+F+ STR+RCGRSL+GYPFNP L+E+ Y EME KV
Sbjct: 96 PDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQGYPFNPCLSEANYLEMESKV 155
Query: 559 SGTLSSL-EGELKGTFYPLTGMSKE 630
++ + EL G ++PL GM+KE
Sbjct: 156 KAIFDNITDPELAGKYFPLDGMTKE 180
Score = 72.9 bits (171), Expect = 3e-13
Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +3
Query: 708 RFWPTGRGIYHNENKTFLVWCNEEDXLRIISMQMGGTCXR-XQKVVNXVNXIKXKS 872
R+WP GRGI+HN KTFL+WCNEED LRIISMQ GG + ++++ V I+ ++
Sbjct: 206 RYWPKGRGIFHNNQKTFLIWCNEEDHLRIISMQEGGNVGQVLERLIKGVKTIEKQA 261
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/28 (71%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Frame = +2
Query: 635 QQQLIDXHFLFKEGXRFLXAANA---WP 709
Q QLI HFLFKEG RFL AANA WP
Sbjct: 182 QDQLIKDHFLFKEGDRFLQAANACRYWP 209
>U41543-1|AAB37022.2| 396|Caenorhabditis elegans Hypothetical
protein F46H5.3a protein.
Length = 396
Score = 178 bits (434), Expect = 4e-45
Identities = 84/145 (57%), Positives = 107/145 (73%), Gaps = 3/145 (2%)
Frame = +1
Query: 205 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 384
V D LK+KKT G+ LLD IQSGV NLDSGVG+YAPDAE+Y++F LFDP+I+DYHNGF
Sbjct: 73 VVDQLKDKKTKLGANLLDVIQSGVANLDSGVGVYAPDAEAYTLFKPLFDPLIQDYHNGFA 132
Query: 385 KTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNPXLTESQYKEMEDKV 558
K P + G+ T L +LDP G+F+ STR+RCGRSL+GYPFNP L+E+ Y EME KV
Sbjct: 133 PDAKQPNTDLGEGKTSALVDLDPEGKFINSTRIRCGRSLQGYPFNPCLSEANYLEMESKV 192
Query: 559 SGTLSSL-EGELKGTFYPLTGMSKE 630
++ + EL G ++PL GM+KE
Sbjct: 193 KAIFDNITDPELAGKYFPLDGMTKE 217
Score = 72.9 bits (171), Expect = 3e-13
Identities = 30/56 (53%), Positives = 41/56 (73%), Gaps = 1/56 (1%)
Frame = +3
Query: 708 RFWPTGRGIYHNENKTFLVWCNEEDXLRIISMQMGGTCXR-XQKVVNXVNXIKXKS 872
R+WP GRGI+HN KTFL+WCNEED LRIISMQ GG + ++++ V I+ ++
Sbjct: 243 RYWPKGRGIFHNNQKTFLIWCNEEDHLRIISMQEGGNVGQVLERLIKGVKTIEKQA 298
Score = 40.3 bits (90), Expect = 0.002
Identities = 20/28 (71%), Positives = 20/28 (71%), Gaps = 3/28 (10%)
Frame = +2
Query: 635 QQQLIDXHFLFKEGXRFLXAANA---WP 709
Q QLI HFLFKEG RFL AANA WP
Sbjct: 219 QDQLIKDHFLFKEGDRFLQAANACRYWP 246
>AF043703-6|AAK21503.1| 399|Caenorhabditis elegans Hypothetical
protein W10C8.5 protein.
Length = 399
Score = 172 bits (419), Expect = 3e-43
Identities = 83/145 (57%), Positives = 103/145 (71%), Gaps = 3/145 (2%)
Frame = +1
Query: 205 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 384
V + LK K+T G+TL DCI+SGV NLD+GVG+YAPDAE+Y++FA LFD IIEDYH GF
Sbjct: 76 VVEKLKTKRTKLGATLYDCIRSGVYNLDAGVGVYAPDAEAYTLFAPLFDKIIEDYH-GFS 134
Query: 385 KTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNPXLTESQYKEMEDKV 558
K PP + G+ T LDP G+++ STR+RCGRSL+GYPFNP LT+ Y EME KV
Sbjct: 135 PKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKGYPFNPCLTQDNYLEMEGKV 194
Query: 559 SGTLSSL-EGELKGTFYPLTGMSKE 630
S + ELKG +YPL GM K+
Sbjct: 195 KKAFSEYSDKELKGKYYPLDGMGKD 219
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +3
Query: 711 FWPTGRGIYHNENKTFLVWCNEEDXLRIISMQMG 812
FWP GRGI+HN +KTFL+W NEED +RIISMQ G
Sbjct: 246 FWPKGRGIFHNNDKTFLIWVNEEDHMRIISMQEG 279
Score = 35.1 bits (77), Expect = 0.070
Identities = 18/28 (64%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Frame = +2
Query: 635 QQQLIDXHFLFKEGXRFLXAANA---WP 709
Q+QLI HFLFKEG R L ANA WP
Sbjct: 221 QKQLIADHFLFKEGDRHLQYANACNFWP 248
>AF003148-10|AAB54206.2| 427|Caenorhabditis elegans Hypothetical
protein F32B5.1 protein.
Length = 427
Score = 172 bits (418), Expect = 3e-43
Identities = 83/145 (57%), Positives = 103/145 (71%), Gaps = 3/145 (2%)
Frame = +1
Query: 205 VFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIEDYHNGFK 384
V + LK K+T G+TL DCI+SGV NLD+GVG+YAPDAE+Y++FA LFD IIEDYH GF
Sbjct: 104 VVEKLKTKRTKVGATLYDCIRSGVYNLDAGVGVYAPDAEAYTLFAPLFDKIIEDYH-GFS 162
Query: 385 KTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNPXLTESQYKEMEDKV 558
K PP + G+ T LDP G+++ STR+RCGRSL+GYPFNP LT+ Y EME KV
Sbjct: 163 PKQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLKGYPFNPCLTQDNYLEMEGKV 222
Query: 559 SGTLSSL-EGELKGTFYPLTGMSKE 630
S + ELKG +YPL GM K+
Sbjct: 223 KKAFSEYSDKELKGKYYPLDGMGKD 247
Score = 64.1 bits (149), Expect = 1e-10
Identities = 25/34 (73%), Positives = 29/34 (85%)
Frame = +3
Query: 711 FWPTGRGIYHNENKTFLVWCNEEDXLRIISMQMG 812
FWP GRGI+HN +KTFL+W NEED +RIISMQ G
Sbjct: 274 FWPKGRGIFHNNDKTFLIWVNEEDHMRIISMQEG 307
Score = 35.1 bits (77), Expect = 0.070
Identities = 18/28 (64%), Positives = 19/28 (67%), Gaps = 3/28 (10%)
Frame = +2
Query: 635 QQQLIDXHFLFKEGXRFLXAANA---WP 709
Q+QLI HFLFKEG R L ANA WP
Sbjct: 249 QKQLIADHFLFKEGDRHLQYANACNFWP 276
>Z83109-2|CAB05517.1| 372|Caenorhabditis elegans Hypothetical
protein F44G3.2 protein.
Length = 372
Score = 163 bits (396), Expect = 2e-40
Identities = 82/152 (53%), Positives = 101/152 (66%), Gaps = 3/152 (1%)
Frame = +1
Query: 184 RSTLPGXVFDSLKNKKTSFGSTLLDCIQSGVENLDSGVGIYAPDAESYSVFAELFDPIIE 363
+ L V + LK K T G+ L DCI+SGV LD+ VG+YAPDAE+Y++FA LFD IIE
Sbjct: 42 KKNLTKDVIEKLKTKSTKLGANLYDCIRSGVYCLDALVGVYAPDAEAYTLFAPLFDKIIE 101
Query: 364 DYHNGFKKTDKHPPKNWGDVDT--LGNLDPAGEFVVSTRVRCGRSLEGYPFNPXLTESQY 537
DYH G K PP + G+ T LDP G+++ STR+RCGRSL GY FNP LTE Y
Sbjct: 102 DYH-GLGPDQKQPPVDLGEGKTKEFPPLDPKGKYIKSTRIRCGRSLNGYQFNPCLTEDNY 160
Query: 538 KEMEDKVSGTLSSL-EGELKGTFYPLTGMSKE 630
EME+KV S + ELKGT+YPL GMSK+
Sbjct: 161 LEMEEKVKKAFSEFSDEELKGTYYPLDGMSKD 192
Score = 64.5 bits (150), Expect = 1e-10
Identities = 26/34 (76%), Positives = 28/34 (82%)
Frame = +3
Query: 711 FWPTGRGIYHNENKTFLVWCNEEDXLRIISMQMG 812
FWP GRGI+HN KTFL+W NEED LRIISMQ G
Sbjct: 219 FWPKGRGIFHNNKKTFLIWVNEEDHLRIISMQEG 252
Score = 34.7 bits (76), Expect = 0.092
Identities = 18/28 (64%), Positives = 18/28 (64%), Gaps = 3/28 (10%)
Frame = +2
Query: 635 QQQLIDXHFLFKEGXRFLXAANA---WP 709
Q QLI HFLFKEG R L ANA WP
Sbjct: 194 QNQLIADHFLFKEGDRHLQYANACNFWP 221
>U50067-5|AAY86219.1| 306|Caenorhabditis elegans Hypothetical
protein C18F3.4 protein.
Length = 306
Score = 31.1 bits (67), Expect = 1.1
Identities = 16/42 (38%), Positives = 23/42 (54%), Gaps = 3/42 (7%)
Frame = +2
Query: 203 KYSTA*RTRRPHSDPPSL---TVSNRVSRTWTPASVSTRRTP 319
K S R PHS P++ TV N + +WTP+++S TP
Sbjct: 88 KLSPPRRQSNPHSSLPAISSSTVKNEPTDSWTPSALSNDPTP 129
>U50070-2|AAR85908.1| 592|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform b protein.
Length = 592
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -1
Query: 443 SRLPSVSTSPQFLGGCLSVFLKPLW*SSMIGSNSSANTEYDSASGA*IPTPESKFSTP 270
S +PSVS+ P FL LS +P + S SAS P P+SK P
Sbjct: 290 STVPSVSSMPSFLNHQLSTSSQPSSQQASGSSGPLLQRAASSASTETSPNPDSKSFVP 347
>U50070-1|AAR85907.1| 778|Caenorhabditis elegans Forkhead
transcription factor familyprotein 7, isoform a protein.
Length = 778
Score = 28.7 bits (61), Expect = 6.0
Identities = 20/58 (34%), Positives = 25/58 (43%)
Frame = -1
Query: 443 SRLPSVSTSPQFLGGCLSVFLKPLW*SSMIGSNSSANTEYDSASGA*IPTPESKFSTP 270
S +PSVS+ P FL LS +P + S SAS P P+SK P
Sbjct: 476 STVPSVSSMPSFLNHQLSTSSQPSSQQASGSSGPLLQRAASSASTETSPNPDSKSFVP 533
>U40945-6|AAS80346.1| 437|Caenorhabditis elegans Hypothetical
protein F10D7.5c protein.
Length = 437
Score = 28.3 bits (60), Expect = 8.0
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = -1
Query: 596 PLSSPSRLDRVPETLSSISLYWDSVXQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTS 417
PLS P R R+P+ S S Y P + P R V + S P++ST+
Sbjct: 250 PLSIPRRPARIPDGAPSSSSYLAPAVPARAPPPVPQSPLRVNVR-DSLEGSSSTPALSTT 308
Query: 416 ----PQFLGGCLSVFLKPLW*SSMIGSNSSAN 333
LG + P+ +++GS+SS +
Sbjct: 309 RPTIDDLLGEIIPSTPPPVAPRAVLGSSSSTS 340
>U40945-5|AAS80344.1| 617|Caenorhabditis elegans Hypothetical
protein F10D7.5a protein.
Length = 617
Score = 28.3 bits (60), Expect = 8.0
Identities = 25/92 (27%), Positives = 39/92 (42%), Gaps = 4/92 (4%)
Frame = -1
Query: 596 PLSSPSRLDRVPETLSSISLYWDSVXQGLKGYPSSERPQRTRVETTNSPAGSRLPSVSTS 417
PLS P R R+P+ S S Y P + P R V + S P++ST+
Sbjct: 430 PLSIPRRPARIPDGAPSSSSYLAPAVPARAPPPVPQSPLRVNVR-DSLEGSSSTPALSTT 488
Query: 416 ----PQFLGGCLSVFLKPLW*SSMIGSNSSAN 333
LG + P+ +++GS+SS +
Sbjct: 489 RPTIDDLLGEIIPSTPPPVAPRAVLGSSSSTS 520
>AF099921-1|AAC68807.1| 1286|Caenorhabditis elegans Hypothetical
protein M01E10.2 protein.
Length = 1286
Score = 28.3 bits (60), Expect = 8.0
Identities = 14/39 (35%), Positives = 20/39 (51%), Gaps = 3/39 (7%)
Frame = +2
Query: 233 PHSDPPSLTVSNRVSRTW---TPASVSTRRTPSRTPCSP 340
P + S T + R +TW TP + +TR+TP T P
Sbjct: 382 PTTQTSSTTQTPRTKQTWAPWTPPTTTTRQTPPTTQAPP 420
>AF067943-7|AAO12415.1| 420|Caenorhabditis elegans Hypothetical
protein F59B1.8 protein.
Length = 420
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/35 (37%), Positives = 17/35 (48%)
Frame = -2
Query: 205 LXLVRYFFSSDLESDXLELAETSLQFLEGCGVDHC 101
L L + FFS E D ++F+EG V HC
Sbjct: 137 LLLPKVFFSQKFEEDNPNKGFVGMEFVEGSVVRHC 171
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,286,838
Number of Sequences: 27780
Number of extensions: 322212
Number of successful extensions: 1135
Number of sequences better than 10.0: 13
Number of HSP's better than 10.0 without gapping: 1029
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1123
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2307803960
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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