BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_C13
(896 letters)
Database: mosquito
2352 sequences; 563,979 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein ... 28 0.44
AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcript... 26 1.4
AY146725-1|AAO12085.1| 155|Anopheles gambiae odorant-binding pr... 23 9.5
AY146724-1|AAO12084.1| 151|Anopheles gambiae odorant-binding pr... 23 9.5
AF437889-1|AAL84184.1| 155|Anopheles gambiae odorant binding pr... 23 9.5
>AY939827-1|AAY18208.1| 680|Anopheles gambiae CTCF-like protein
protein.
Length = 680
Score = 27.9 bits (59), Expect = 0.44
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = +1
Query: 829 HMXMHPSEKRYGCEVC 876
HM +H EK Y C+VC
Sbjct: 258 HMRIHTGEKPYSCDVC 273
>AB090819-2|BAC57914.1| 1022|Anopheles gambiae reverse transcriptase
protein.
Length = 1022
Score = 26.2 bits (55), Expect = 1.4
Identities = 9/16 (56%), Positives = 11/16 (68%)
Frame = -1
Query: 338 SIKTTCRVQWNGKCHR 291
S+K CR QW +CHR
Sbjct: 781 SLKFECRKQWLRRCHR 796
>AY146725-1|AAO12085.1| 155|Anopheles gambiae odorant-binding
protein AgamOBP6 protein.
Length = 155
Score = 23.4 bits (48), Expect = 9.5
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -1
Query: 479 FRIDVIISQAALMDVNVSSDLLFVLFSCFIKLKPQ 375
FR+ + + A D ++ ++L CF K P+
Sbjct: 117 FRLGLDSCRTAADDATDRCEVAYILLKCFFKASPK 151
>AY146724-1|AAO12084.1| 151|Anopheles gambiae odorant-binding
protein AgamOBP18 protein.
Length = 151
Score = 23.4 bits (48), Expect = 9.5
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -1
Query: 479 FRIDVIISQAALMDVNVSSDLLFVLFSCFIKLKPQ 375
FR+ + + A D ++ ++L CF K P+
Sbjct: 113 FRLGLDSCRTAADDATDRCEVAYILLKCFFKASPK 147
>AF437889-1|AAL84184.1| 155|Anopheles gambiae odorant binding
protein protein.
Length = 155
Score = 23.4 bits (48), Expect = 9.5
Identities = 9/35 (25%), Positives = 17/35 (48%)
Frame = -1
Query: 479 FRIDVIISQAALMDVNVSSDLLFVLFSCFIKLKPQ 375
FR+ + + A D ++ ++L CF K P+
Sbjct: 117 FRLGLDSCRTAADDATDRCEVAYILLKCFFKASPK 151
Database: mosquito
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 563,979
Number of sequences in database: 2352
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 758,336
Number of Sequences: 2352
Number of extensions: 12926
Number of successful extensions: 23
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 22
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 23
length of database: 563,979
effective HSP length: 64
effective length of database: 413,451
effective search space used: 96747534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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