Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_C13
         (896 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein pro...    28   0.13 
AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein ...    27   0.18 
AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamat...    23   5.0  
EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.          22   8.7  
EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.      22   8.7  

>L01588-1|AAA27735.1|   74|Apis mellifera zinc finger protein
           protein.
          Length = 74

 Score = 27.9 bits (59), Expect = 0.13
 Identities = 15/51 (29%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
 Frame = +1

Query: 739 YLKT*MQATM--KPYXXXXXXXXXXXXXXXXTHMXMHPSEKRYGCEVCEKK 885
           +LKT M+     KPY                 H+ +H  E+ Y CE+C  K
Sbjct: 24  HLKTHMRLHTGEKPYHCSHCDRQFVQVANLRRHLRVHTGERPYACELCAAK 74


>AY338499-1|AAR08420.1|  500|Apis mellifera Kruppel-like protein 1
           protein.
          Length = 500

 Score = 27.5 bits (58), Expect = 0.18
 Identities = 11/38 (28%), Positives = 15/38 (39%)
 Frame = +1

Query: 769 KPYXXXXXXXXXXXXXXXXTHMXMHPSEKRYGCEVCEK 882
           KPY                 H  +H  E+ Y C+VCE+
Sbjct: 118 KPYQCEYCSKSFSVKENLSVHRRIHTKERPYKCDVCER 155



 Score = 25.8 bits (54), Expect = 0.54
 Identities = 11/38 (28%), Positives = 13/38 (34%)
 Frame = +1

Query: 769 KPYXXXXXXXXXXXXXXXXTHMXMHPSEKRYGCEVCEK 882
           KPY                 H   H  EK Y C++C K
Sbjct: 202 KPYVCKACGKGFTCSKQLKVHTRTHTGEKPYTCDICGK 239



 Score = 25.0 bits (52), Expect = 0.94
 Identities = 9/18 (50%), Positives = 9/18 (50%)
 Frame = +1

Query: 829 HMXMHPSEKRYGCEVCEK 882
           H   H  EK Y CE C K
Sbjct: 110 HYRTHTGEKPYQCEYCSK 127



 Score = 25.0 bits (52), Expect = 0.94
 Identities = 9/18 (50%), Positives = 10/18 (55%)
 Frame = +1

Query: 829 HMXMHPSEKRYGCEVCEK 882
           HM  H  EK Y C+ C K
Sbjct: 194 HMRTHTGEKPYVCKACGK 211



 Score = 24.6 bits (51), Expect = 1.2
 Identities = 8/18 (44%), Positives = 11/18 (61%)
 Frame = +1

Query: 829 HMXMHPSEKRYGCEVCEK 882
           HM +H  E+ + C VC K
Sbjct: 166 HMRIHTGERPHKCTVCSK 183


>AB161182-1|BAD08344.1| 1040|Apis mellifera metabotropic glutamate
           receptor protein.
          Length = 1040

 Score = 22.6 bits (46), Expect = 5.0
 Identities = 11/26 (42%), Positives = 13/26 (50%)
 Frame = -2

Query: 664 KIGNKQNIQKHVFPLEYVSFVIWLLF 587
           KI    N  KH+    Y + VIWL F
Sbjct: 839 KIPEAFNESKHIGFTMYTTCVIWLAF 864


>EF625897-1|ABR45904.1|  684|Apis mellifera hexamerin protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 796 FYRLYKHKVSWLPAFKFLNKHLKK 725
           FYR+YK  + +  ++K   K   K
Sbjct: 418 FYRIYKRIIDYYHSYKMHQKPYNK 441


>EF591128-1|ABQ59246.1|  684|Apis mellifera hexamerin 70a protein.
          Length = 684

 Score = 21.8 bits (44), Expect = 8.7
 Identities = 8/24 (33%), Positives = 13/24 (54%)
 Frame = -2

Query: 796 FYRLYKHKVSWLPAFKFLNKHLKK 725
           FYR+YK  + +  ++K   K   K
Sbjct: 418 FYRIYKRIIDYYHSYKMHQKPYNK 441


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 201,107
Number of Sequences: 438
Number of extensions: 3874
Number of successful extensions: 18
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 18
length of database: 146,343
effective HSP length: 58
effective length of database: 120,939
effective search space used: 29025360
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)