Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_C07
         (883 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory recept...    25   0.60 
EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B pro...    23   3.2  
DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory pro...    23   4.2  

>AM292326-1|CAL23138.2|  522|Tribolium castaneum gustatory receptor
           candidate 5 protein.
          Length = 522

 Score = 25.4 bits (53), Expect = 0.60
 Identities = 10/17 (58%), Positives = 14/17 (82%)
 Frame = +3

Query: 174 VNEKSILGFLSAIFNFL 224
           +N K+ILG L+A+F FL
Sbjct: 495 LNRKTILGVLNALFTFL 511


>EF125544-1|ABL73928.1|  279|Tribolium castaneum obstractor B
           protein.
          Length = 279

 Score = 23.0 bits (47), Expect = 3.2
 Identities = 9/18 (50%), Positives = 11/18 (61%)
 Frame = +3

Query: 240 FYYVPDGQYENIGFPPGV 293
           FYY  DG+Y  I  P G+
Sbjct: 125 FYYCVDGKYNMITCPNGL 142


>DQ855506-1|ABH88193.1|  124|Tribolium castaneum chemosensory
           protein 20 protein.
          Length = 124

 Score = 22.6 bits (46), Expect = 4.2
 Identities = 6/16 (37%), Positives = 11/16 (68%)
 Frame = +1

Query: 787 LLMHLEKVREQWWSKL 834
           ++ HL K ++ WW +L
Sbjct: 88  VIQHLYKNKQDWWKQL 103


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 200,248
Number of Sequences: 336
Number of extensions: 4481
Number of successful extensions: 12
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 12
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 12
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 24410188
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)