Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_C07
(883 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
10_05_0101 - 9167383-9167679,9167883-9167961,9168161-9168326,916... 39 0.006
10_01_0175 + 1959565-1960431,1960886-1960955,1961537-1961704,196... 35 0.075
07_01_0678 - 5103836-5104613,5104697-5104888,5104994-5105036,510... 35 0.099
06_01_0888 + 6805071-6805485,6806202-6806374,6806501-6806549,680... 34 0.17
04_01_0481 - 6302066-6303118 34 0.17
02_05_0720 - 31213391-31213617,31213724-31213772,31213898-312140... 33 0.23
10_06_0043 - 10026817-10027869 33 0.30
07_03_0179 + 14801037-14801108,14801325-14802788 32 0.53
07_03_1332 + 25854171-25854695 31 1.6
03_06_0484 + 34233042-34233258,34235317-34237049 31 1.6
12_02_0463 + 19379222-19379225,19379565-19380322 30 2.1
06_03_0705 - 23707987-23708295,23708532-23708573,23709772-237099... 30 2.1
11_08_0075 + 28173220-28173433,28175348-28177083 30 2.8
01_06_0678 - 31114259-31114321,31114508-31114552,31114644-311147... 30 2.8
03_02_0546 - 9381989-9383733,9385838-9386054 29 3.7
01_06_1338 + 36411536-36411646,36411738-36411791,36411898-364119... 29 3.7
01_06_1072 + 34295227-34295316,34295410-34295583,34296268-342963... 29 6.5
05_04_0077 - 17712043-17712246,17712487-17712522,17712746-177129... 28 8.6
01_07_0237 + 42204301-42205200,42205356-42206030 28 8.6
>10_05_0101 -
9167383-9167679,9167883-9167961,9168161-9168326,
9169201-9169299,9169969-9171361
Length = 677
Score = 38.7 bits (86), Expect = 0.006
Identities = 46/154 (29%), Positives = 62/154 (40%), Gaps = 7/154 (4%)
Frame = +3
Query: 153 DILSNILVNEKSILGFLSAIFNFLARRTDFYYVPDG---QYENIGFPPGVAEELVIKVLR 323
DIL + NEK LG A F+ L + + +PD Q+ A L I
Sbjct: 129 DILISFRQNEKESLGAAWAKFSLLTQSGPDFSLPDHVLLQHFRYALDKESAANLDISAGE 188
Query: 324 TCDPKNVKEPHKHTDL---NNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVR 494
+ K E + DL N+ S EVE+I E L E D T+E +
Sbjct: 189 SFAHKTTAEGRELLDLILENDSFGQSEAIPEVEIIHEEP----LHMESEPDS-TAESSFQ 243
Query: 495 KAVSSEPEEYKPPVIPIQKRSECYNG-ADRENYS 593
+ E EE PP IP+Q R + Y + NYS
Sbjct: 244 -LLQPEEEEIHPPEIPLQFRDDLYKDYGNTLNYS 276
>10_01_0175 +
1959565-1960431,1960886-1960955,1961537-1961704,
1962570-1962676
Length = 403
Score = 35.1 bits (77), Expect = 0.075
Identities = 44/154 (28%), Positives = 61/154 (39%), Gaps = 7/154 (4%)
Frame = +3
Query: 153 DILSNILVNEKSILGFLSAIFNFLARRTDFYYVPDG---QYENIGFPPGVAEELVIKVLR 323
DI+S NEK LG A F+ L + +PD Q G A L I
Sbjct: 129 DIIS-FRQNEKEYLGVAWARFSLLTQSGPDLSLPDHVLLQQFRYGLDKESAANLDISAEG 187
Query: 324 TCDPKNVKEPHKHTDL---NNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVR 494
+ K E + DL N+ S EV++I + +LE + T+E R
Sbjct: 188 SFAHKTTAEGRELLDLILENDSFGRSEAVPEVKIIYEDPLHEELEPNS-----TAESSFR 242
Query: 495 KAVSSEPEEYKPPVIPIQKRSECYNG-ADRENYS 593
+ E EE PP IP Q + + Y + NYS
Sbjct: 243 -LLEPEEEEIHPPEIPFQFKDDLYEDYGNTLNYS 275
>07_01_0678 -
5103836-5104613,5104697-5104888,5104994-5105036,
5105712-5105835,5105924-5106016,5106754-5106931,
5107032-5107138,5108098-5108179,5108277-5108314,
5108409-5108495,5109025-5109135,5109282-5109773
Length = 774
Score = 34.7 bits (76), Expect = 0.099
Identities = 21/94 (22%), Positives = 44/94 (46%)
Frame = +3
Query: 339 NVKEPHKHTDLNNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVRKAVSSEPE 518
+ +P D N+ ST +QE E +D + + + + + + +H + + + E
Sbjct: 658 DASDPDAGFDAENDTELSTSSQEQEE-DEDDGPEEQKDNSDDNKMDEDHVMVENKEEQEE 716
Query: 519 EYKPPVIPIQKRSECYNGADRENYSWAQTLMDLD 620
+ +PP +P Q+ E RE + +T +DL+
Sbjct: 717 QPQPPPLPPQQPVEKMEAPSREIETVGRTFLDLN 750
>06_01_0888 +
6805071-6805485,6806202-6806374,6806501-6806549,
6806654-6806820,6806919-6807002,6807097-6807135
Length = 308
Score = 33.9 bits (74), Expect = 0.17
Identities = 14/29 (48%), Positives = 18/29 (62%)
Frame = +3
Query: 567 NGADRENYSWAQTLMDLDVTVKLPPDIKS 653
NG D E YSW Q L ++ +TV +P KS
Sbjct: 144 NGLDLEKYSWIQQLPEVTITVPVPQGTKS 172
>04_01_0481 - 6302066-6303118
Length = 350
Score = 33.9 bits (74), Expect = 0.17
Identities = 48/154 (31%), Positives = 60/154 (38%), Gaps = 7/154 (4%)
Frame = +3
Query: 153 DILSNILVNEKSILGFLSAIFNFLARRTDFYYVPDG---QYENIGFPPGVAEELVIKVLR 323
DILS NEK L A F+ L + +PD Q+ G L I
Sbjct: 129 DILS-FRQNEKESLDAAWARFSLLTQSGPDLSLPDHVLLQHFRYGLDKESTANLDISAGG 187
Query: 324 TCDPKNVKEPHKHTDL---NNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVR 494
+ K KE + DL NN S EVEVI ED L E D ++
Sbjct: 188 SFAHKTTKEGRELLDLILENNSFGRSEAILEVEVI-HEDP---LHVESEPD--STAKSSF 241
Query: 495 KAVSSEPEEYKPPVIPIQKRSECYNG-ADRENYS 593
+ + E EE PP IP Q R + Y + NYS
Sbjct: 242 QLLEPEEEEIHPPEIPFQFRDDLYEDYGNTLNYS 275
>02_05_0720 -
31213391-31213617,31213724-31213772,31213898-31214076,
31215861-31216110
Length = 234
Score = 33.5 bits (73), Expect = 0.23
Identities = 17/56 (30%), Positives = 28/56 (50%), Gaps = 2/56 (3%)
Frame = +3
Query: 495 KAVSSEPEEYKPPVIPIQK--RSECYNGADRENYSWAQTLMDLDVTVKLPPDIKSS 656
KA++ +E + +K + NG D E YSW Q ++ +T+ +P KSS
Sbjct: 65 KAIAGRSDEEVLAAVLARKDPKPNAGNGLDLEKYSWTQERPEVTITIPVPQGTKSS 120
>10_06_0043 - 10026817-10027869
Length = 350
Score = 33.1 bits (72), Expect = 0.30
Identities = 45/154 (29%), Positives = 64/154 (41%), Gaps = 7/154 (4%)
Frame = +3
Query: 153 DILSNILVNEKSILGFLSAIFNFLARRTDFYYVPDG---QYENIGFPPGVAEELVIKVLR 323
DILS NEK LG A F+ L + +PD Q+ G A L I
Sbjct: 129 DILS-FRQNEKESLGAAWARFSLLTQSGPNLCLPDHVLLQHFRYGLDKESATNLDIFAGG 187
Query: 324 TCDPKNVKEPHKHTDL---NNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVR 494
+ K E + DL N+ S E+E+I + +E+ + V +S
Sbjct: 188 SFAHKTTAEGKELLDLILENDSFGQSEACPEIEII--HEYPLHVESEPDSTVESSF---- 241
Query: 495 KAVSSEPEEYKPPVIPIQKRSECY-NGADRENYS 593
+++ E EE PP IP Q R + Y N + NYS
Sbjct: 242 QSLEPEEEEIHPPKIPFQFRGDLYENYENTLNYS 275
>07_03_0179 + 14801037-14801108,14801325-14802788
Length = 511
Score = 32.3 bits (70), Expect = 0.53
Identities = 42/152 (27%), Positives = 58/152 (38%), Gaps = 7/152 (4%)
Frame = +3
Query: 159 LSNILVNEKSILGFLSAIFNFLARRTDFYYVPDG---QYENIGFPPGVAEELVIKVLRTC 329
L + +NEK LG A F L + +PD Q+ G A+ L I +
Sbjct: 19 LRDFELNEKESLGAAWARFLLLTQSGPDLSLPDHVLLQHFWYGLDKESAKNLDISAGGSF 78
Query: 330 DPKNVKEPHKHTDL---NNEIMCSTVAQEVEVIASEDTSADLEASGEQDVLTSEHQVRKA 500
K E + DL N+ S EVE+I E + E D +S+ Q
Sbjct: 79 AHKTTTEGRELLDLILENDSFGRSEAVPEVEIIHEESLHVESEPDSTADS-SSQSQ---- 133
Query: 501 VSSEPEEYKPPVIPIQKRSECYNG-ADRENYS 593
E EE PP IP Q + + + NYS
Sbjct: 134 -EPEEEEIHPPKIPFQFEEDLFEDYGNTSNYS 164
>07_03_1332 + 25854171-25854695
Length = 174
Score = 30.7 bits (66), Expect = 1.6
Identities = 15/37 (40%), Positives = 21/37 (56%), Gaps = 1/37 (2%)
Frame = +3
Query: 249 VPDGQYENIGFP-PGVAEELVIKVLRTCDPKNVKEPH 356
V DG + GFP P V + + +V++ CD KEPH
Sbjct: 52 VDDGGCVDKGFPLPNVDSKTLARVIQYCDEHGNKEPH 88
>03_06_0484 + 34233042-34233258,34235317-34237049
Length = 649
Score = 30.7 bits (66), Expect = 1.6
Identities = 22/94 (23%), Positives = 45/94 (47%), Gaps = 8/94 (8%)
Frame = +3
Query: 393 TVAQEVEVIASEDTSADLEASGEQDVLT--------SEHQVRKAVSSEPEEYKPPVIPIQ 548
TV +++ + SA+ + +G+++ +T S+ ++ K V + E+YK +
Sbjct: 482 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQ-DAEKYKSEDEEHK 540
Query: 549 KRSECYNGADRENYSWAQTLMDLDVTVKLPPDIK 650
K+ + N + Y+ T+ D + KLP D K
Sbjct: 541 KKVDAKNSLENYAYNMRNTIQDEKIASKLPADDK 574
>12_02_0463 + 19379222-19379225,19379565-19380322
Length = 253
Score = 30.3 bits (65), Expect = 2.1
Identities = 20/61 (32%), Positives = 32/61 (52%), Gaps = 2/61 (3%)
Frame = +3
Query: 351 PHKHTDLNNEIMCSTVAQEVEVIASEDTSADLEA--SGEQDVLTSEHQVRKAVSSEPEEY 524
P D +I+ + QE V A ED A +EA +GE+D++ ++ KAV + EY
Sbjct: 86 PTLAADERLDILYNRTLQEETVGAVEDAVASMEAQVAGERDIVDAKKLRLKAVRAAVAEY 145
Query: 525 K 527
+
Sbjct: 146 R 146
>06_03_0705 -
23707987-23708295,23708532-23708573,23709772-23709957,
23710112-23710222,23710337-23710408,23710499-23710747,
23711052-23711135,23711271-23711456,23711540-23711764
Length = 487
Score = 30.3 bits (65), Expect = 2.1
Identities = 14/36 (38%), Positives = 20/36 (55%)
Frame = +3
Query: 429 DTSADLEASGEQDVLTSEHQVRKAVSSEPEEYKPPV 536
D AD SGE +V+ +V +S+PE+ KP V
Sbjct: 38 DVQADGAHSGESEVINPAEEVGGEATSQPEDVKPRV 73
>11_08_0075 + 28173220-28173433,28175348-28177083
Length = 649
Score = 29.9 bits (64), Expect = 2.8
Identities = 25/99 (25%), Positives = 47/99 (47%), Gaps = 9/99 (9%)
Frame = +3
Query: 393 TVAQEVEVIASEDTSADLEASGEQDVLT--------SEHQVRKAVSSEPEEYKPPVIPIQ 548
TV +++ + SA+ + +G+++ +T S+ ++ K V E E+YK +
Sbjct: 481 TVCFDIDANGILNVSAEDKTTGQKNKITITNDKGRLSKEEIEKMVQ-EAEKYKSEDEEHK 539
Query: 549 KRSECYNGADRENYSWAQTLMDLDVTVKLP-PDIKSSKD 662
K+ E N + Y+ T+ D + KLP D K +D
Sbjct: 540 KKVESKNALENYAYNMRNTIKDEKIASKLPAADKKKIED 578
>01_06_0678 -
31114259-31114321,31114508-31114552,31114644-31114742,
31114827-31114872,31115026-31115102,31115385-31115432,
31120640-31120708,31120848-31120853,31120955-31121032,
31121246-31121344,31121427-31121489,31122642-31122713,
31122800-31122874,31122965-31123021,31123983-31124186,
31124317-31124394,31124485-31124547,31124646-31125284,
31125367-31125416,31125496-31125576,31125896-31125923
Length = 679
Score = 29.9 bits (64), Expect = 2.8
Identities = 29/106 (27%), Positives = 45/106 (42%), Gaps = 2/106 (1%)
Frame = +3
Query: 345 KEPHKHTDLNNEIMCSTVAQEVEVIASEDTSAD--LEASGEQDVLTSEHQVRKAVSSEPE 518
KE D N+I V EVEV ++E ++ D + G D SE + S P+
Sbjct: 124 KEEKVVVDRKNDIGAEVVDTEVEVQSTERSAEDAAIVVDGAADSGNSEGAAESSAPSVPD 183
Query: 519 EYKPPVIPIQKRSECYNGADRENYSWAQTLMDLDVTVKLPPDIKSS 656
E P I Q +E + + E A ++ + +K PD + S
Sbjct: 184 ERCEPSISNQD-AEIVSAVNLEEKDSAMEVIH-EKNIKEVPDTQVS 227
>03_02_0546 - 9381989-9383733,9385838-9386054
Length = 653
Score = 29.5 bits (63), Expect = 3.7
Identities = 16/58 (27%), Positives = 28/58 (48%)
Frame = +3
Query: 477 SEHQVRKAVSSEPEEYKPPVIPIQKRSECYNGADRENYSWAQTLMDLDVTVKLPPDIK 650
S+ ++ + V E E+YK ++ + E N + Y+ T+ D + KLP D K
Sbjct: 518 SKEEIERMVQ-EAEKYKAEDEQVRHKVEARNALENYAYNMRNTVRDEKIASKLPADDK 574
>01_06_1338 +
36411536-36411646,36411738-36411791,36411898-36411974,
36412108-36412195,36412289-36412561,36412651-36412968
Length = 306
Score = 29.5 bits (63), Expect = 3.7
Identities = 27/101 (26%), Positives = 49/101 (48%), Gaps = 8/101 (7%)
Frame = +3
Query: 369 LNNEIMCSTVAQEVEVIASEDTSADLEAS-GEQDVLTSEHQVRKAVSSEPEEYKPPVIPI 545
+ ++I CS +A E +A + T DL+ + ++ Q++K PE + P IP
Sbjct: 76 ITSKIWCSDLAPEDVPLAMDSTLKDLQLDYVDLYLIHWPFQIKKGTELSPENFVKPDIPS 135
Query: 546 QKRS--ECY-NGADR----ENYSWAQTLMDLDVTVKLPPDI 647
R+ + Y +G R N+S ++ L DL ++PP +
Sbjct: 136 TWRAMEQLYDSGKARAIGVSNFS-SKKLGDLLCVARVPPAV 175
>01_06_1072 +
34295227-34295316,34295410-34295583,34296268-34296322,
34296410-34296679,34296881-34297092,34297276-34297396,
34297674-34297761,34297834-34297912,34298092-34298179,
34298312-34298352,34298477-34298529,34298623-34298779,
34298862-34299053
Length = 539
Score = 28.7 bits (61), Expect = 6.5
Identities = 11/34 (32%), Positives = 20/34 (58%)
Frame = +3
Query: 705 QNGDVIVKDSLLFKIRPVIVLESXRXTIVDASGK 806
+ DV V+D ++ +RP I + ++DA+GK
Sbjct: 69 EEADVYVEDGVIVAVRPNIPVGDDHVKVIDATGK 102
>05_04_0077 - 17712043-17712246,17712487-17712522,17712746-17712900,
17713431-17713591,17713950-17714110,17714188-17715657,
17715704-17715998,17716461-17717737,17717826-17718137,
17718223-17718356,17718449-17718521,17719994-17720059,
17720748-17720936
Length = 1510
Score = 28.3 bits (60), Expect = 8.6
Identities = 23/88 (26%), Positives = 44/88 (50%), Gaps = 2/88 (2%)
Frame = +3
Query: 327 CDPKNVKEPHKHTDLNNEIMCSTVA-QEVEVIASEDTSADLEASG-EQDVLTSEHQVRKA 500
C PK +KE K + +++ STV + +A + + SG + D L + +++K
Sbjct: 761 CFPK-LKEKQKRIESSDKGEKSTVTISSGQTMAKDRMHRKRKTSGADYDNLIASKKLKK- 818
Query: 501 VSSEPEEYKPPVIPIQKRSECYNGADRE 584
V +EP +++PP + K G+ +E
Sbjct: 819 VYNEPPKHQPPQFELSKSRPSTKGSLKE 846
>01_07_0237 + 42204301-42205200,42205356-42206030
Length = 524
Score = 28.3 bits (60), Expect = 8.6
Identities = 12/29 (41%), Positives = 20/29 (68%), Gaps = 1/29 (3%)
Frame = -3
Query: 608 KSLRPRVIFSVRSI-VALASLLYWYHWRL 525
+ +RP + F V +I +AL +LLY + W+L
Sbjct: 443 RRMRPGLTFGVSNIEIALVTLLYHFDWKL 471
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 21,992,511
Number of Sequences: 37544
Number of extensions: 446038
Number of successful extensions: 1251
Number of sequences better than 10.0: 19
Number of HSP's better than 10.0 without gapping: 1219
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1250
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2491484208
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
- SilkBase 1999-2023 -