Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_C01
         (899 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021571-5|CAA16513.2|  140|Caenorhabditis elegans Hypothetical ...    96   3e-20
AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical ...    96   3e-20

>AL021571-5|CAA16513.2|  140|Caenorhabditis elegans Hypothetical
           protein T19A6.3a protein.
          Length = 140

 Score = 96.3 bits (229), Expect = 3e-20
 Identities = 50/126 (39%), Positives = 74/126 (58%), Gaps = 4/126 (3%)
 Frame = +1

Query: 172 TACDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDP---LTPVVSLT 342
           TAC+DLK FE+RLTEVI  + P   RWRI + I +V   +    +  +    +  +  + 
Sbjct: 14  TACEDLKFFEKRLTEVITYMGPTCTRWRIAIVIFAVLVGVIGSKYFANEKIEIFQIPMID 73

Query: 343 QSLWNHPFFAVTSTLLVLLFMI-GVHRKVVAPSIITARTRSILNDFNMSCDDTGKLILKP 519
             L  H  F +   + +LLF + GVHR++VAP+I+  R R  L+ F++SCD  GKLI+KP
Sbjct: 74  MFLTTHLDFTLCFFVGLLLFAVFGVHRRIVAPTIVARRCRDALSPFSLSCDHNGKLIVKP 133

Query: 520 RPANSS 537
              NS+
Sbjct: 134 AVRNSA 139


>AL021571-6|CAN99719.1|  142|Caenorhabditis elegans Hypothetical
           protein T19A6.3b protein.
          Length = 142

 Score = 95.9 bits (228), Expect = 3e-20
 Identities = 51/128 (39%), Positives = 74/128 (57%), Gaps = 6/128 (4%)
 Frame = +1

Query: 172 TACDDLKAFERRLTEVIACLQPATMRWRILLTIVSVCTAIAAYHWLMDPLTPVV-----S 336
           TAC+DLK FE+RLTEVI  + P   RWRI + I +V   +    +  + L  +       
Sbjct: 14  TACEDLKFFEKRLTEVITYMGPTCTRWRIAIVIFAVLVGVIGSKYFANELQKIEIFQIPM 73

Query: 337 LTQSLWNHPFFAVTSTLLVLLFMI-GVHRKVVAPSIITARTRSILNDFNMSCDDTGKLIL 513
           +   L  H  F +   + +LLF + GVHR++VAP+I+  R R  L+ F++SCD  GKLI+
Sbjct: 74  IDMFLTTHLDFTLCFFVGLLLFAVFGVHRRIVAPTIVARRCRDALSPFSLSCDHNGKLIV 133

Query: 514 KPRPANSS 537
           KP   NS+
Sbjct: 134 KPAVRNSA 141


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,300,705
Number of Sequences: 27780
Number of extensions: 267405
Number of successful extensions: 683
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 672
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 681
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2286823924
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)