Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B24
         (910 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p pro...    38   0.025
AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA...    38   0.025
AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB...    38   0.025
AE013599-2873|AAF57567.1|   79|Drosophila melanogaster CG10460-P...    36   0.077
AY069492-1|AAL39637.1|  449|Drosophila melanogaster LD22082p pro...    30   5.0  
AE014134-1435|AAF52625.2|  449|Drosophila melanogaster CG8282-PA...    30   5.0  

>BT003231-1|AAO24986.1|  614|Drosophila melanogaster LP08529p
           protein.
          Length = 614

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 257 KYKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFADYTPEEQQSRLGL 415
           +Y   A+R++  + F+++L  I +LN     +  +GI +FAD T  E + R GL
Sbjct: 318 RYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL 371


>AE014297-200|AAF52055.2|  614|Drosophila melanogaster CG12163-PA,
           isoform A protein.
          Length = 614

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 257 KYKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFADYTPEEQQSRLGL 415
           +Y   A+R++  + F+++L  I +LN     +  +GI +FAD T  E + R GL
Sbjct: 318 RYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL 371


>AE014297-199|AAN13266.1|  475|Drosophila melanogaster CG12163-PB,
           isoform B protein.
          Length = 475

 Score = 37.5 bits (83), Expect = 0.025
 Identities = 18/54 (33%), Positives = 31/54 (57%), Gaps = 1/54 (1%)
 Frame = +2

Query: 257 KYKDDADRELHYQSFKKHLAEINQLNEKNPYTT-FGINKFADYTPEEQQSRLGL 415
           +Y   A+R++  + F+++L  I +LN     +  +GI +FAD T  E + R GL
Sbjct: 179 RYVSTAERQMRLRIFRQNLKTIEELNANEMGSAKYGITEFADMTSSEYKERTGL 232


>AE013599-2873|AAF57567.1|   79|Drosophila melanogaster CG10460-PA
           protein.
          Length = 79

 Score = 35.9 bits (79), Expect = 0.077
 Identities = 21/55 (38%), Positives = 27/55 (49%), Gaps = 1/55 (1%)
 Frame = +2

Query: 263 KDDADRELHYQSFKKHLAEINQLNEKNPYT-TFGINKFADYTPEEQQSRLGLRLP 424
           ++D  R   Y   K  + E N+  EK   T   GIN  AD TPEE   R G ++P
Sbjct: 23  EEDLMRRRIYAESKARIEEHNRKFEKGEVTWKMGINHLADLTPEEFAQRCGKKVP 77


>AY069492-1|AAL39637.1|  449|Drosophila melanogaster LD22082p
           protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 224 CSKFSSKNITGKYKDDADRELHYQSFKKHLAEINQLNEKNPYTTF 358
           C KF S +  GK +    R     +FKK L E+++L  K+  T +
Sbjct: 391 CEKFESMSACGKEELIGFRNRRVAAFKKSLVELSELEIKHAKTQY 435


>AE014134-1435|AAF52625.2|  449|Drosophila melanogaster CG8282-PA
           protein.
          Length = 449

 Score = 29.9 bits (64), Expect = 5.0
 Identities = 15/45 (33%), Positives = 23/45 (51%)
 Frame = +2

Query: 224 CSKFSSKNITGKYKDDADRELHYQSFKKHLAEINQLNEKNPYTTF 358
           C KF S +  GK +    R     +FKK L E+++L  K+  T +
Sbjct: 391 CEKFESMSACGKEELIGFRNRRVAAFKKSLVELSELEIKHAKTQY 435


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 34,068,542
Number of Sequences: 53049
Number of extensions: 629982
Number of successful extensions: 1863
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1697
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1846
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4443987051
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)