Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B24
         (910 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical ...    44   1e-04
AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical ...    35   0.070
U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical p...    33   0.21 
Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical pr...    31   0.86 
AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical...    31   1.1  
U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical pr...    27   4.0  
AC006627-4|AAK85459.1|  712|Caenorhabditis elegans Hypothetical ...    29   4.6  

>AL021497-4|CAA16407.1|  386|Caenorhabditis elegans Hypothetical
           protein Y51A2D.8 protein.
          Length = 386

 Score = 44.4 bits (100), Expect = 1e-04
 Identities = 23/69 (33%), Positives = 37/69 (53%), Gaps = 4/69 (5%)
 Frame = +2

Query: 242 KNITGKYKDDADRELHYQSFKKHLAEINQLNEKNPY----TTFGINKFADYTPEEQQSRL 409
           K    KYKD+++ +  + +F K    +++LN K+      T FGINKF+D +  E   RL
Sbjct: 48  KKYNRKYKDESENQQRFNNFVKSYNNVDKLNAKSKAAGYDTQFGINKFSDLSTAEFHGRL 107

Query: 410 GLRLPAKKT 436
              +P+  T
Sbjct: 108 SNVVPSNNT 116


>AL021497-1|CAA16404.1|  382|Caenorhabditis elegans Hypothetical
           protein Y51A2D.1 protein.
          Length = 382

 Score = 35.1 bits (77), Expect = 0.070
 Identities = 21/69 (30%), Positives = 33/69 (47%), Gaps = 4/69 (5%)
 Frame = +2

Query: 242 KNITGKYKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSRL 409
           K  +  YK +A+ +L  Q+F K    + +LN+        + F +N+F+D T  E   RL
Sbjct: 49  KKFSRTYKSEAENQLRLQNFVKSRNNVVRLNKNAQKAGRNSNFAVNQFSDLTTSELHQRL 108

Query: 410 GLRLPAKKT 436
             R P   T
Sbjct: 109 S-RFPPNLT 116


>U64859-10|AAC69091.2|  383|Caenorhabditis elegans Hypothetical
           protein R09F10.1 protein.
          Length = 383

 Score = 33.5 bits (73), Expect = 0.21
 Identities = 16/48 (33%), Positives = 24/48 (50%)
 Frame = +2

Query: 257 KYKDDADRELHYQSFKKHLAEINQLNEKNPYTTFGINKFADYTPEEQQ 400
           KY    + E  YQ F +++ E     E+N      +N+F D+T EE Q
Sbjct: 92  KYTSVEEFEYRYQIFLRNVIEFEAEEERNLGLDLDVNEFTDWTDEELQ 139


>Z70750-3|CAA94738.1|  374|Caenorhabditis elegans Hypothetical
           protein C50F4.3 protein.
          Length = 374

 Score = 31.5 bits (68), Expect = 0.86
 Identities = 15/49 (30%), Positives = 30/49 (61%), Gaps = 4/49 (8%)
 Frame = +2

Query: 260 YKDDADRELHYQSF---KKHLAEINQLNEKNPYTT-FGINKFADYTPEE 394
           YKD+ +++  +Q F      + ++N+  +K  + T +GINKF+D + +E
Sbjct: 58  YKDEIEKKFRFQQFVATHNRVGKMNKAAKKAGHDTKYGINKFSDLSKKE 106


>AL110477-10|CAB54334.1|  328|Caenorhabditis elegans Hypothetical
           protein Y113G7B.15 protein.
          Length = 328

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 18/53 (33%), Positives = 27/53 (50%), Gaps = 4/53 (7%)
 Frame = +2

Query: 260 YKDDADRELHYQSFKKHLAEINQLNEK----NPYTTFGINKFADYTPEEQQSR 406
           Y+  A+++     F K+  +I +LN K        TFG NKFAD   +E  +R
Sbjct: 7   YRTPAEKDRRLAHFAKNHQKIQELNAKARREGRNVTFGWNKFADKNRQELSAR 59


>U10438-9|AAU87834.1|  616|Caenorhabditis elegans Hypothetical
           protein B0280.13 protein.
          Length = 616

 Score = 26.6 bits (56), Expect(2) = 4.0
 Identities = 9/20 (45%), Positives = 11/20 (55%)
 Frame = -3

Query: 860 NPXPRXWPIHXAEKPPTPPP 801
           NP P   P   ++ PP PPP
Sbjct: 482 NPSPSPQPAEVSKSPPPPPP 501



 Score = 21.0 bits (42), Expect(2) = 4.0
 Identities = 7/11 (63%), Positives = 8/11 (72%)
 Frame = -3

Query: 818 PPTPPPDLEHK 786
           PP PPP LE +
Sbjct: 518 PPPPPPALEQE 528


>AC006627-4|AAK85459.1|  712|Caenorhabditis elegans Hypothetical
           protein E01A2.2a protein.
          Length = 712

 Score = 29.1 bits (62), Expect = 4.6
 Identities = 17/44 (38%), Positives = 25/44 (56%), Gaps = 3/44 (6%)
 Frame = +2

Query: 257 KYK-DDAD--RELHYQSFKKHLAEINQLNEKNPYTTFGINKFAD 379
           KYK DDA   RE H ++ +K L   N+L E+  +  F ++ F D
Sbjct: 135 KYKPDDAKKLREAHLENVQKRLQVFNELKEQGQFNKFSLD-FGD 177


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,405,446
Number of Sequences: 27780
Number of extensions: 328760
Number of successful extensions: 964
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 861
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 958
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)