Bombyx BLAST Result against tribolium

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B22
         (909 letters)

Database: tribolium 
           336 sequences; 122,585 total letters

Searching.......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory recept...    23   3.3  
DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10 pro...    22   5.8  

>AM292367-1|CAL23179.2| 1451|Tribolium castaneum gustatory receptor
            candidate 46 protein.
          Length = 1451

 Score = 23.0 bits (47), Expect = 3.3
 Identities = 20/94 (21%), Positives = 38/94 (40%), Gaps = 1/94 (1%)
 Frame = +3

Query: 54   KFENFLVDCLASFICFN*LIKMASAVAKVPTLINSAITQARPKLNIFMKYARVELAPPKL 233
            KF+  +V     +     +I   S+   +  +I   +      +   M    VEL     
Sbjct: 1207 KFQRMVVARYVYYATIFTIITATSSFVTIHNVIGQFLGYFIGLITFVMSQHCVELVSMIK 1266

Query: 234  SELPQIRQGIGNLITSAKTGAWKRQT-VKEATLN 332
            +    + Q IG ++T   T   KR+T V++ +L+
Sbjct: 1267 ARFVVVNQQIGGIVTYFSTNLPKRETEVRKKSLD 1300


>DQ659250-1|ABG47448.1| 2700|Tribolium castaneum chitinase 10
           protein.
          Length = 2700

 Score = 22.2 bits (45), Expect = 5.8
 Identities = 9/17 (52%), Positives = 11/17 (64%)
 Frame = +3

Query: 291 GAWKRQTVKEATLNVLV 341
           GAW+RQT    T+  LV
Sbjct: 838 GAWERQTGHNFTMEYLV 854


  Database: tribolium
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 122,585
  Number of sequences in database:  336
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 146,408
Number of Sequences: 336
Number of extensions: 2341
Number of successful extensions: 7
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 7
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 7
length of database: 122,585
effective HSP length: 57
effective length of database: 103,433
effective search space used: 25341085
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)