Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B22
         (909 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_06_0087 - 10520708-10520823,10521041-10521130,10521571-105219...    37   0.019
04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,943...    31   1.7  
07_03_1136 + 24218601-24218734,24218769-24219906                       29   5.1  
02_05_0686 - 30900748-30902167,30903442-30904742                       29   6.7  
01_05_0599 - 23550663-23550849,23553236-23553417                       29   6.7  

>10_06_0087 -
           10520708-10520823,10521041-10521130,10521571-10521901,
           10522248-10522409,10522506-10522726,10523852-10524056
          Length = 374

 Score = 37.1 bits (82), Expect = 0.019
 Identities = 27/71 (38%), Positives = 37/71 (52%), Gaps = 2/71 (2%)
 Frame = +3

Query: 186 NIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWK-RQTVKEATLNVLVGAEVIFW 362
           N+F+    + L  P+ S+ PQ  +   N I  +KTG WK   TV+  T  V+VG +V   
Sbjct: 53  NVFVGM-NISLIDPRNSDDPQSPKNGENAIIKSKTGYWKVVGTVRIPTSTVIVGMKVSLD 111

Query: 363 FYIGEC-IGKR 392
            Y GE   GKR
Sbjct: 112 HYEGEAPSGKR 122


>04_03_0018 - 9434088-9434141,9434211-9434282,9434968-9435062,
            9435445-9435526,9435610-9435660,9435749-9435829,
            9435965-9436006,9436117-9436215,9438130-9438201,
            9438557-9438680,9438850-9439723,9440274-9440456,
            9440941-9442741,9442825-9443049,9443117-9443814,
            9444519-9444591
          Length = 1541

 Score = 30.7 bits (66), Expect = 1.7
 Identities = 15/39 (38%), Positives = 17/39 (43%)
 Frame = +3

Query: 792  PPPXGKGXXXLGPFPFPPXKXXXPGXXGGGXGFXPPXGG 908
            PPP  +G   +G  P PP     P   G   G  PP GG
Sbjct: 1185 PPPPPRGHGGVGGPPTPPGAPAPPMPPGVPGGPPPPPGG 1223


>07_03_1136 + 24218601-24218734,24218769-24219906
          Length = 423

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 16/39 (41%), Positives = 16/39 (41%)
 Frame = -3

Query: 907 PPXGGXKPXPPPXXPGXXXFXGGXGKGPXXXXPXPXGGG 791
           PP GG  P P     G     GG G GP    P   GGG
Sbjct: 91  PPGGGGAPGPLGGG-GARPPGGGGGGGPPSLPPGAGGGG 128



 Score = 28.3 bits (60), Expect = 8.9
 Identities = 17/39 (43%), Positives = 17/39 (43%)
 Frame = -3

Query: 907 PPXGGXKPXPPPXXPGXXXFXGGXGKGPXXXXPXPXGGG 791
           PP GG    PP   PG     GG G  P    P P GGG
Sbjct: 108 PPGGGGGGGPPSLPPGAG---GGGGARP----PAPGGGG 139


>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = -3

Query: 907 PPXGGXKPXPPPXXPGXXXFXGGXGKGPXXXXPXPXGG 794
           PP  G  P PPP  P         GK      P P GG
Sbjct: 348 PPAKGPPPPPPPKGPSPPPPPPPGGKKGGPPPPPPKGG 385


>01_05_0599 - 23550663-23550849,23553236-23553417
          Length = 122

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 16/43 (37%), Positives = 24/43 (55%), Gaps = 4/43 (9%)
 Frame = +3

Query: 297 WK-RQTVKEATLNV--LVGAEVIFWFYIGECIGKRH-LVGYDV 413
           WK R+ +K   L +  L G E+  WF +GE +G+   + GY V
Sbjct: 80  WKNRKELKVEDLGIVTLFGVELYAWFCVGEIVGRGFTITGYKV 122


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,314,889
Number of Sequences: 37544
Number of extensions: 283546
Number of successful extensions: 603
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 504
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 591
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)