Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_B22
(909 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U42830-1|AAC48276.1| 131|Caenorhabditis elegans Atp synthase g ... 61 1e-09
Z81098-3|CAB03179.1| 131|Caenorhabditis elegans Hypothetical pr... 60 2e-09
Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical pr... 31 0.86
Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical pr... 31 0.86
U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protei... 31 1.5
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 30 2.0
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 30 2.0
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 30 2.0
Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical pr... 29 3.5
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.5
>U42830-1|AAC48276.1| 131|Caenorhabditis elegans Atp synthase g
homolog protein 2 protein.
Length = 131
Score = 60.9 bits (141), Expect = 1e-09
Identities = 24/65 (36%), Positives = 42/65 (64%)
Frame = +3
Query: 213 ELAPPKLSELPQIRQGIGNLITSAKTGAWKRQTVKEATLNVLVGAEVIFWFYIGECIGKR 392
ELAPP+ ++ P I+ + + +TG +K +++E + V EV+FWF++GE IG+R
Sbjct: 41 ELAPPRQADWPAIKADWAKVQSFIQTGGYKNLSIREGLVYTAVTLEVVFWFFVGEMIGRR 100
Query: 393 HLVGY 407
++ GY
Sbjct: 101 YIFGY 105
>Z81098-3|CAB03179.1| 131|Caenorhabditis elegans Hypothetical
protein K07A12.3 protein.
Length = 131
Score = 60.1 bits (139), Expect = 2e-09
Identities = 27/78 (34%), Positives = 46/78 (58%)
Frame = +3
Query: 180 KLNIFMKYARVELAPPKLSELPQIRQGIGNLITSAKTGAWKRQTVKEATLNVLVGAEVIF 359
+L I + ELAPP+ +++P I+ L +T + ++KE+ + V EV+F
Sbjct: 30 RLAILKAVGKHELAPPRSADIPAIKADWAKLQKFIETKQYVNLSIKESLVYSAVALEVVF 89
Query: 360 WFYIGECIGKRHLVGYDV 413
WF++GE IG+R++ GY V
Sbjct: 90 WFFVGEMIGRRYIFGYIV 107
>Z81479-3|CAB03942.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.3 protein.
Length = 283
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 898 GGXKPXPPPXXPGXXXFXGGXGKGPXXXXPXPXG 797
GG P PP PG GG G+G P P G
Sbjct: 148 GGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRG 181
>Z81479-2|CAB03941.1| 283|Caenorhabditis elegans Hypothetical
protein C34F6.2 protein.
Length = 283
Score = 31.5 bits (68), Expect = 0.86
Identities = 14/34 (41%), Positives = 15/34 (44%)
Frame = -3
Query: 898 GGXKPXPPPXXPGXXXFXGGXGKGPXXXXPXPXG 797
GG P PP PG GG G+G P P G
Sbjct: 148 GGPGPKGPPGPPGGPGELGGPGRGGNRGPPGPRG 181
>U80451-8|AAB37842.2| 288|Caenorhabditis elegans Collagen protein
20 protein.
Length = 288
Score = 30.7 bits (66), Expect = 1.5
Identities = 14/36 (38%), Positives = 15/36 (41%)
Frame = -3
Query: 904 PXGGXKPXPPPXXPGXXXFXGGXGKGPXXXXPXPXG 797
P GG P PP PG G G+G P P G
Sbjct: 151 PAGGPGPKGPPGPPGGHGEPGPAGRGGPRGPPGPGG 186
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 907 PPXGGXKPXPPPXXPGXXXFXGGXGKGP 824
PP GG P PPP PG F GG P
Sbjct: 763 PPPGGCPPPPPPPPPG--GFKGGPPPPP 788
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 907 PPXGGXKPXPPPXXPGXXXFXGGXGKGP 824
PP GG P PPP PG F GG P
Sbjct: 763 PPPGGCPPPPPPPPPG--GFKGGPPPPP 788
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 30.3 bits (65), Expect = 2.0
Identities = 14/28 (50%), Positives = 14/28 (50%)
Frame = -3
Query: 907 PPXGGXKPXPPPXXPGXXXFXGGXGKGP 824
PP GG P PPP PG F GG P
Sbjct: 346 PPPGGCPPPPPPPPPG--GFKGGPPPPP 371
>Z81088-4|CAB03125.1| 105|Caenorhabditis elegans Hypothetical
protein F53F1.4 protein.
Length = 105
Score = 29.5 bits (63), Expect = 3.5
Identities = 16/42 (38%), Positives = 17/42 (40%), Gaps = 3/42 (7%)
Frame = +3
Query: 792 PPPXGKGXXXLGPFPFPP---XKXXXPGXXGGGXGFXPPXGG 908
PPP G G L P P + P GGG G P GG
Sbjct: 35 PPPCGCGGPSLPPLQLPRFELPRLSLPSFGGGGCGGPAPCGG 76
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.5
Identities = 15/35 (42%), Positives = 15/35 (42%)
Frame = -3
Query: 898 GGXKPXPPPXXPGXXXFXGGXGKGPXXXXPXPXGG 794
GG P PPP PG G GP P P GG
Sbjct: 407 GGYGP-PPPGGPGAPGSYGPPQGGPGGFGPPPPGG 440
Score = 28.3 bits (60), Expect = 8.0
Identities = 13/32 (40%), Positives = 13/32 (40%)
Frame = +3
Query: 792 PPPXGKGXXXLGPFPFPPXKXXXPGXXGGGXG 887
PPP G G P FPP PG G G
Sbjct: 436 PPPGGPGAYGPPPTGFPPVGAPPPGAAGAPGG 467
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 14,133,272
Number of Sequences: 27780
Number of extensions: 237674
Number of successful extensions: 694
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 496
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 665
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2318293978
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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