Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B21
         (914 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

06_01_0760 - 5676973-5677830                                           30   2.9  
06_01_0690 + 5033943-5034740                                           29   6.8  
06_01_0145 + 1092764-1093351                                           29   6.8  

>06_01_0760 - 5676973-5677830
          Length = 285

 Score = 29.9 bits (64), Expect = 2.9
 Identities = 16/50 (32%), Positives = 19/50 (38%)
 Frame = -2

Query: 904 GFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDGXDFKXPGXKG 755
           G+GP   P G  G     G QG    G + G  G   G G  +   G  G
Sbjct: 185 GYGPYYGPYGGSGAYAQGGGQGGGGGGGQNGGSGQGSGSGSGYGQAGGYG 234


>06_01_0690 + 5033943-5034740
          Length = 265

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 16/52 (30%), Positives = 22/52 (42%)
 Frame = -2

Query: 910 GXGFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDGXDFKXPGXKG 755
           G G+G +A   G +GG    G  G    G + G  G+  G G  +   G  G
Sbjct: 92  GSGYG-QAGGYGPYGGYAQGGGGGGGGGGGQNGGSGYGSGSGSGYGQAGGYG 142


>06_01_0145 + 1092764-1093351
          Length = 195

 Score = 28.7 bits (61), Expect = 6.8
 Identities = 20/53 (37%), Positives = 22/53 (41%), Gaps = 1/53 (1%)
 Frame = -2

Query: 904 GFGPRANPRGXWGGXIXEGFQGNXX-RGPKXGXXGFXGGDGXDFKXPGXKGXG 749
           G G R    G  GG    G +G    RG + G  GF GGDG      G  G G
Sbjct: 124 GIGGRGGDGGC-GGVGGRGRKGGRGGRGGRGGSGGFGGGDGGRGGRGGDGGEG 175


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,054,934
Number of Sequences: 37544
Number of extensions: 162891
Number of successful extensions: 221
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 196
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 221
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2600672280
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)