Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B21
         (914 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071346-1|AAL48968.1|   89|Drosophila melanogaster RE38252p pro...    30   3.8  
AY070690-1|AAL48161.1|   89|Drosophila melanogaster RH25462p pro...    30   3.8  
AE014134-2517|AAN10880.1|   89|Drosophila melanogaster CG31775-P...    30   3.8  
AE014134-147|AAF51462.1|  119|Drosophila melanogaster CG13947-PA...    30   3.8  
X58183-1|CAA41170.1|  386|Drosophila melanogaster heterogeneous ...    30   5.1  
BT012315-1|AAS77440.1|  385|Drosophila melanogaster LD32727p pro...    29   6.7  
AE014297-1716|AAF54967.1|  385|Drosophila melanogaster CG12749-P...    29   6.7  
AE014297-1715|AAN13574.1|  325|Drosophila melanogaster CG12749-P...    29   6.7  
AE014298-3099|AAN09667.1|  388|Drosophila melanogaster CG32521-P...    29   8.9  
AE014298-3098|AAF50844.2|  388|Drosophila melanogaster CG32521-P...    29   8.9  

>AY071346-1|AAL48968.1|   89|Drosophila melanogaster RE38252p
           protein.
          Length = 89

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -2

Query: 913 FGXGFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDG 785
           FG GFG +   +G +GG    GF     +       GF GG G
Sbjct: 37  FGGGFGDQQQQQGGFGGGFGGGFGDQQQQQQGGFGGGFGGGFG 79


>AY070690-1|AAL48161.1|   89|Drosophila melanogaster RH25462p
           protein.
          Length = 89

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -2

Query: 913 FGXGFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDG 785
           FG GFG +   +G +GG    GF     +       GF GG G
Sbjct: 37  FGGGFGDQQQQQGGFGGGFGGGFGDQQQQQQGGFGGGFGGGFG 79


>AE014134-2517|AAN10880.1|   89|Drosophila melanogaster CG31775-PA
           protein.
          Length = 89

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 15/43 (34%), Positives = 19/43 (44%)
 Frame = -2

Query: 913 FGXGFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDG 785
           FG GFG +   +G +GG    GF     +       GF GG G
Sbjct: 37  FGGGFGDQQQQQGGFGGGFGGGFGDQQQQQQGGFGGGFGGGFG 79


>AE014134-147|AAF51462.1|  119|Drosophila melanogaster CG13947-PA
           protein.
          Length = 119

 Score = 30.3 bits (65), Expect = 3.8
 Identities = 15/38 (39%), Positives = 18/38 (47%)
 Frame = -2

Query: 898 GPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDG 785
           GP+  P+G   G    G QG    GP+ G  G  GG G
Sbjct: 37  GPQGGPQGGPQGGPQGGPQGGPQGGPQGGPQGGPGGPG 74


>X58183-1|CAA41170.1|  386|Drosophila melanogaster heterogeneous
           nuclear ribonucleoproteinprotein.
          Length = 386

 Score = 29.9 bits (64), Expect = 5.1
 Identities = 23/74 (31%), Positives = 27/74 (36%)
 Frame = -2

Query: 904 GFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDGXDFKXPGXKGXGXXLEXLSX 725
           G G R    G WGG   +   GN   G + G  GF G  G +F      G G   +    
Sbjct: 215 GQGDRGQGGGGWGGQNRQNGGGNW--GGRGGGGGF-GNSGGNFGGGQGGGSGGWNQQGGT 271

Query: 724 GLKPXTNWGXXXQG 683
           G  P  N G    G
Sbjct: 272 GGGPWNNQGGGNGG 285


>BT012315-1|AAS77440.1|  385|Drosophila melanogaster LD32727p
           protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 29/100 (29%), Positives = 32/100 (32%)
 Frame = -2

Query: 904 GFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDGXDFKXPGXKGXGXXLEXLSX 725
           G G R    G WGG   +   GN   G   G  GF G  G +F      G G   +    
Sbjct: 215 GQGDRGQGGGGWGGQNRQNGGGNW--GGAGGGGGF-GNSGGNFGGGQGGGSGGWNQQGGS 271

Query: 724 GLKPXTNWGXXXQGGILLRGXXXKVXPGGLRPNXWPGKPG 605
           G  P  N G    G     G       GG     W G  G
Sbjct: 272 GGGPWNNQGGGNGG---WNGGGGGGYGGGNSNGSWGGNGG 308


>AE014297-1716|AAF54967.1|  385|Drosophila melanogaster CG12749-PA,
           isoform A protein.
          Length = 385

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 29/100 (29%), Positives = 32/100 (32%)
 Frame = -2

Query: 904 GFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDGXDFKXPGXKGXGXXLEXLSX 725
           G G R    G WGG   +   GN   G   G  GF G  G +F      G G   +    
Sbjct: 215 GQGDRGQGGGGWGGQNRQNGGGNW--GGAGGGGGF-GNSGGNFGGGQGGGSGGWNQQGGS 271

Query: 724 GLKPXTNWGXXXQGGILLRGXXXKVXPGGLRPNXWPGKPG 605
           G  P  N G    G     G       GG     W G  G
Sbjct: 272 GGGPWNNQGGGNGG---WNGGGGGGYGGGNSNGSWGGNGG 308


>AE014297-1715|AAN13574.1|  325|Drosophila melanogaster CG12749-PB,
           isoform B protein.
          Length = 325

 Score = 29.5 bits (63), Expect = 6.7
 Identities = 29/100 (29%), Positives = 32/100 (32%)
 Frame = -2

Query: 904 GFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDGXDFKXPGXKGXGXXLEXLSX 725
           G G R    G WGG   +   GN   G   G  GF G  G +F      G G   +    
Sbjct: 215 GQGDRGQGGGGWGGQNRQNGGGNW--GGAGGGGGF-GNSGGNFGGGQGGGSGGWNQQGGS 271

Query: 724 GLKPXTNWGXXXQGGILLRGXXXKVXPGGLRPNXWPGKPG 605
           G  P  N G    G     G       GG     W G  G
Sbjct: 272 GGGPWNNQGGGNGG---WNGGGGGGYGGGNSNGSWGGNGG 308


>AE014298-3099|AAN09667.1|  388|Drosophila melanogaster CG32521-PB,
           isoform B protein.
          Length = 388

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 16/45 (35%), Positives = 17/45 (37%)
 Frame = -2

Query: 910 GXGFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDGXDF 776
           G G GP A   G  G  I  G  G+   G   G  G  GG    F
Sbjct: 275 GYGGGPAAGGGGSGGSNILGGLLGSVLSGGGGGNAGAGGGSASSF 319


>AE014298-3098|AAF50844.2|  388|Drosophila melanogaster CG32521-PA,
           isoform A protein.
          Length = 388

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 16/45 (35%), Positives = 17/45 (37%)
 Frame = -2

Query: 910 GXGFGPRANPRGXWGGXIXEGFQGNXXRGPKXGXXGFXGGDGXDF 776
           G G GP A   G  G  I  G  G+   G   G  G  GG    F
Sbjct: 275 GYGGGPAAGGGGSGGSNILGGLLGSVLSGGGGGNAGAGGGSASSF 319


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,618,610
Number of Sequences: 53049
Number of extensions: 265975
Number of successful extensions: 308
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 281
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 302
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)