Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_B19
(885 letters)
Database: uniref50
1,657,284 sequences; 575,637,011 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9; ... 110 5e-23
UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1; ... 102 1e-20
UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular organi... 74 6e-12
UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1; ... 68 4e-10
UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3; ... 64 3e-09
UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE... 58 3e-07
UniRef50_UPI00015C640B Cluster: hypothetical protein CKO_pCKO2p0... 50 1e-04
UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1; ... 45 0.003
UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep: Alpha-h... 44 0.004
UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4; Ma... 41 0.048
UniRef50_P03023 Cluster: Lactose operon repressor; n=24; Enterob... 40 0.084
UniRef50_P03087 Cluster: Capsid protein VP1; n=1927; Polyomaviru... 38 0.45
UniRef50_UPI00015C63F8 Cluster: hypothetical protein CKO_pCKO3p0... 36 1.4
UniRef50_Q12GC2 Cluster: Putative uncharacterized protein precur... 34 5.5
UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1; Lentisp... 34 5.5
UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1; ... 34 5.5
UniRef50_Q6DNE0 Cluster: CurM; n=1; Lyngbya majuscula|Rep: CurM ... 33 9.7
>UniRef50_Q5QJQ3 Cluster: Putative uncharacterized protein; n=9;
root|Rep: Putative uncharacterized protein - Salmonella
typhimurium
Length = 127
Score = 110 bits (264), Expect = 5e-23
Identities = 47/56 (83%), Positives = 48/56 (85%)
Frame = +2
Query: 629 PWKAPSCALLFRPCRLPDTCPPFSLXEAWRXLIXHAVXISXRCXSFAPXWAVCTNP 796
P +APSCALLFRPCRLPDTCPPFSL EAWR LI HAV IS RC SFAP WAVCTNP
Sbjct: 49 PLEAPSCALLFRPCRLPDTCPPFSLREAWRFLIAHAVGISVRCRSFAPSWAVCTNP 104
Score = 81.0 bits (191), Expect = 4e-14
Identities = 40/51 (78%), Positives = 42/51 (82%)
Frame = +1
Query: 487 SKRPGTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPLES 639
SK+ T R RFSIGSAPLTSITKIDAQVRGGETRQDYKDTRR PLE+
Sbjct: 2 SKKQSTGTSQRRCRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRFPLEA 52
>UniRef50_Q6UUU1 Cluster: Putative uncharacterized protein; n=1;
Escherichia coli|Rep: Putative uncharacterized protein -
Escherichia coli
Length = 147
Score = 102 bits (244), Expect = 1e-20
Identities = 61/105 (58%), Positives = 66/105 (62%)
Frame = +1
Query: 319 RGEAVCVLGALPLPRSLTRCARSFGCGERYQLTQRR*YGYPQNQGITQERTCEQKASKRP 498
R +C G +PLPRSLTR ARSFGCGERY+LT G E T + SK
Sbjct: 26 RVSRICDTGDIPLPRSLTRYARSFGCGERYRLTD--------GDGNFLEDT-RKTLSKEE 76
Query: 499 GTVKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPL 633
RPR RFSIGSAPLTSI K DAQ+ GGETRQDYKD RR PL
Sbjct: 77 ---IRPRRSRFSIGSAPLTSIAKSDAQISGGETRQDYKDPRRFPL 118
>UniRef50_A7SXR8 Cluster: Predicted protein; n=4; cellular
organisms|Rep: Predicted protein - Nematostella
vectensis
Length = 97
Score = 73.7 bits (173), Expect = 6e-12
Identities = 35/43 (81%), Positives = 37/43 (86%)
Frame = +1
Query: 505 VKRPRCWRFSIGSAPLTSITKIDAQVRGGETRQDYKDTRRXPL 633
V+ PR RFSIGSAPLTSITK DAQ+ GGETRQDYKDTRR PL
Sbjct: 44 VRGPRQSRFSIGSAPLTSITKSDAQISGGETRQDYKDTRRFPL 86
>UniRef50_A6NX90 Cluster: Putative uncharacterized protein; n=1;
Bacteroides capillosus ATCC 29799|Rep: Putative
uncharacterized protein - Bacteroides capillosus ATCC
29799
Length = 37
Score = 67.7 bits (158), Expect = 4e-10
Identities = 31/37 (83%), Positives = 32/37 (86%)
Frame = +1
Query: 646 VRSPVPTLPLTGYLSAFLPSGSVAXSHXSRCXYFXSV 756
+RSPVPTLPLTGYLSAFLPSGSVA SH SRC Y SV
Sbjct: 1 MRSPVPTLPLTGYLSAFLPSGSVALSHSSRCRYLSSV 37
>UniRef50_O69419 Cluster: Putative uncharacterized protein; n=3;
root|Rep: Putative uncharacterized protein - Escherichia
coli
Length = 61
Score = 64.5 bits (150), Expect = 3e-09
Identities = 30/38 (78%), Positives = 30/38 (78%)
Frame = -1
Query: 495 PFAGLLLTCSFLRYPLILWITVLPPLSELIPLAAAERP 382
P LLTCSF YPLILWITVLPPLSEL PLAA ERP
Sbjct: 19 PVLCFLLTCSFRLYPLILWITVLPPLSELTPLAAVERP 56
>UniRef50_Q9KHC4 Cluster: SocE; n=1; Myxococcus xanthus|Rep: SocE -
Myxococcus xanthus
Length = 486
Score = 58.0 bits (134), Expect = 3e-07
Identities = 32/57 (56%), Positives = 35/57 (61%), Gaps = 1/57 (1%)
Frame = +1
Query: 295 CINESANARGEAVCVLGALPLPRSLTRCARSFGCGERYQL-TQRR*YGYPQNQGITQ 462
CI + A AR EAV VL ALPL RS TRC RS GCG + R YG PQ QG+ Q
Sbjct: 266 CIRDPATARSEAVWVLVALPLLRSRTRCVRSVGCGGAVSAHSPGRPYGDPQPQGMAQ 322
>UniRef50_UPI00015C640B Cluster: hypothetical protein
CKO_pCKO2p07168; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO2p07168 -
Citrobacter koseri ATCC BAA-895
Length = 99
Score = 49.6 bits (113), Expect = 1e-04
Identities = 27/67 (40%), Positives = 33/67 (49%)
Frame = -3
Query: 796 GVXAHSPXWSERXTPX*NTYSVXYEXAPRFXKGERRTGIR*AAGSEQESARGSFPGXNAW 617
GV A+SP WSER P +T SV YE APRF KG++ + A G +
Sbjct: 27 GVRAYSPAWSERPKPSRDTSSVSYEKAPRFPKGKKAEQVSGKRQGRNRRAHEGAAGEKSP 86
Query: 616 YLYSPVG 596
SPVG
Sbjct: 87 ASLSPVG 93
>UniRef50_A7BN23 Cluster: Putative uncharacterized protein; n=1;
Beggiatoa sp. SS|Rep: Putative uncharacterized protein -
Beggiatoa sp. SS
Length = 114
Score = 44.8 bits (101), Expect = 0.003
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 2/84 (2%)
Frame = +1
Query: 394 CGERYQLTQRR*YG--YPQNQGITQERTCEQKASKRPGTVKRPRCWRFSIGSAPLTSITK 567
C R Q R G +P+N I +R + + + P T F S PLT+ITK
Sbjct: 22 CCHRQQCLLNRNLGLDHPRNHKIMHQRALIRNSPQTPRTYNYTLSSLFPYNSPPLTTITK 81
Query: 568 IDAQVRGGETRQDYKDTRRXPLES 639
I Q + +T+ +YK T PL+S
Sbjct: 82 IYPQFKNTQTQHNYKYTTPFPLQS 105
>UniRef50_Q44068 Cluster: Alpha-hemolysin; n=2; root|Rep:
Alpha-hemolysin - Aeromonas hydrophila
Length = 59
Score = 44.4 bits (100), Expect = 0.004
Identities = 20/20 (100%), Positives = 20/20 (100%)
Frame = +3
Query: 414 HSKAVIRLSTESGDNAGKNM 473
HSKAVIRLSTESGDNAGKNM
Sbjct: 40 HSKAVIRLSTESGDNAGKNM 59
>UniRef50_A0ST23 Cluster: Putative reverse transcriptase; n=4;
Magnoliophyta|Rep: Putative reverse transcriptase -
Zingiber officinale (Ginger)
Length = 49
Score = 40.7 bits (91), Expect = 0.048
Identities = 16/17 (94%), Positives = 17/17 (100%)
Frame = +2
Query: 293 SALMNRPTRGERRFAYW 343
+ALMNRPTRGERRFAYW
Sbjct: 25 AALMNRPTRGERRFAYW 41
>UniRef50_P03023 Cluster: Lactose operon repressor; n=24;
Enterobacteriaceae|Rep: Lactose operon repressor -
Escherichia coli (strain K12)
Length = 360
Score = 39.9 bits (89), Expect = 0.084
Identities = 19/24 (79%), Positives = 21/24 (87%)
Frame = -2
Query: 365 ERGSGRAPNTQTASPRALADSLMQ 294
+R + APNTQTASPRALADSLMQ
Sbjct: 325 KRKTTLAPNTQTASPRALADSLMQ 348
>UniRef50_P03087 Cluster: Capsid protein VP1; n=1927;
Polyomavirus|Rep: Capsid protein VP1 - Simian virus 40
(SV40)
Length = 364
Score = 37.5 bits (83), Expect = 0.45
Identities = 16/16 (100%), Positives = 16/16 (100%)
Frame = +2
Query: 107 MIRYIDEFGQTTTRMQ 154
MIRYIDEFGQTTTRMQ
Sbjct: 349 MIRYIDEFGQTTTRMQ 364
>UniRef50_UPI00015C63F8 Cluster: hypothetical protein
CKO_pCKO3p06146; n=1; Citrobacter koseri ATCC
BAA-895|Rep: hypothetical protein CKO_pCKO3p06146 -
Citrobacter koseri ATCC BAA-895
Length = 125
Score = 35.9 bits (79), Expect = 1.4
Identities = 18/36 (50%), Positives = 19/36 (52%)
Frame = +2
Query: 689 PPFSLXEAWRXLIXHAVXISXRCXSFAPXWAVCTNP 796
PPFSL + IS RC SFAP WAV NP
Sbjct: 59 PPFSLAGSVALSHSSHSGISARCRSFAPSWAVSKNP 94
>UniRef50_Q12GC2 Cluster: Putative uncharacterized protein
precursor; n=2; Polaromonas|Rep: Putative
uncharacterized protein precursor - Polaromonas sp.
(strain JS666 / ATCC BAA-500)
Length = 268
Score = 33.9 bits (74), Expect = 5.5
Identities = 16/44 (36%), Positives = 26/44 (59%), Gaps = 3/44 (6%)
Frame = -1
Query: 504 GSWPFAGLLLTCSFLRYP---LILWITVLPPLSELIPLAAAERP 382
G W +G L L++ LI+W+ LPPL++ IP+A+ + P
Sbjct: 158 GVWLSSGNALPWGLLQFGGMGLIVWLACLPPLADEIPMASGDSP 201
>UniRef50_A6DNS7 Cluster: Probable ECF sigma factor; n=1;
Lentisphaera araneosa HTCC2155|Rep: Probable ECF sigma
factor - Lentisphaera araneosa HTCC2155
Length = 201
Score = 33.9 bits (74), Expect = 5.5
Identities = 17/56 (30%), Positives = 28/56 (50%)
Frame = +2
Query: 176 EICDAIALFVTIISCNKQVNNNNCIHFMFQVQGEVWEVFSALMNRPTRGERRFAYW 343
+ DA F+ I N +N+++C + +V +VWE + P RG +F YW
Sbjct: 32 DFSDAYRRFIYIALRNNGLNHHDCEEVVQRVMIKVWEKIARFKYNPGRG--KFRYW 85
>UniRef50_A2SSD8 Cluster: Putative uncharacterized protein; n=1;
Methanocorpusculum labreanum Z|Rep: Putative
uncharacterized protein - Methanocorpusculum labreanum
(strain ATCC 43576 / DSM 4855 / Z)
Length = 109
Score = 33.9 bits (74), Expect = 5.5
Identities = 21/55 (38%), Positives = 28/55 (50%)
Frame = -3
Query: 256 KMNAIVVVNLFIAAYNGYK*SNSITNFTNKAFFSLHSSCGLSKLINVSYHVWIQL 92
+MNA V + FIAA + +T + AFF L S G ++VSY VW L
Sbjct: 27 RMNAWVDLAAFIAAV-----ATCVTGYVLWAFFPLGSGRGAMNFLDVSYQVWYDL 76
>UniRef50_Q6DNE0 Cluster: CurM; n=1; Lyngbya majuscula|Rep: CurM -
Lyngbya majuscula
Length = 2147
Score = 33.1 bits (72), Expect = 9.7
Identities = 13/28 (46%), Positives = 17/28 (60%)
Frame = +3
Query: 762 RSLQXGLCAXTPVXPDRWXLSGNYRXNP 845
R L G+ A TPV P RW ++ +Y NP
Sbjct: 60 RLLHDGIDAITPVPPHRWDVNAHYEPNP 87
Database: uniref50
Posted date: Oct 5, 2007 11:19 AM
Number of letters in database: 575,637,011
Number of sequences in database: 1,657,284
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 745,385,737
Number of Sequences: 1657284
Number of extensions: 13750297
Number of successful extensions: 36009
Number of sequences better than 10.0: 17
Number of HSP's better than 10.0 without gapping: 34647
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 35992
length of database: 575,637,011
effective HSP length: 100
effective length of database: 409,908,611
effective search space used: 79522270534
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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