Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B17
         (916 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein prot...   109   5e-24
AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB...   109   5e-24
AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA...   109   5e-24
X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal pr...   109   7e-24
AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p pro...   109   7e-24
Z29361-1|CAA82545.1|  644|Drosophila melanogaster BTD protein.         33   0.55 
AE014298-1363|AAF46518.1|  644|Drosophila melanogaster CG12653-P...    33   0.55 
BT003783-1|AAO41464.1|  994|Drosophila melanogaster LP02833p pro...    31   2.2  
AY084183-1|AAL89921.1|  315|Drosophila melanogaster RE62247p pro...    31   2.2  
AE014297-1651|AAF54925.1|  988|Drosophila melanogaster CG8773-PA...    31   2.2  
AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p pro...    31   2.9  
AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p pro...    31   2.9  
AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB...    31   2.9  
AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-P...    29   8.9  

>X05016-1|CAA28672.1|  113|Drosophila melanogaster r-protein
           protein.
          Length = 113

 Score =  109 bits (262), Expect = 5e-24
 Identities = 53/70 (75%), Positives = 60/70 (85%)
 Frame = +2

Query: 128 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 307
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 308 KLSSMPVGGG 337
           KLSSMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>AE013599-2313|AAS64838.1|  113|Drosophila melanogaster CG4918-PB,
           isoform B protein.
          Length = 113

 Score =  109 bits (262), Expect = 5e-24
 Identities = 53/70 (75%), Positives = 60/70 (85%)
 Frame = +2

Query: 128 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 307
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 308 KLSSMPVGGG 337
           KLSSMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>AE013599-2312|AAF57979.1|  113|Drosophila melanogaster CG4918-PA,
           isoform A protein.
          Length = 113

 Score =  109 bits (262), Expect = 5e-24
 Identities = 53/70 (75%), Positives = 60/70 (85%)
 Frame = +2

Query: 128 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 307
           MRYVAAYLLAVLGGK +PA +D+EKILSSVG+E DAE+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANSDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 308 KLSSMPVGGG 337
           KLSSMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>X05466-1|CAA29026.1|  113|Drosophila melanogaster r ribosomal
           protein protein.
          Length = 113

 Score =  109 bits (261), Expect = 7e-24
 Identities = 53/70 (75%), Positives = 59/70 (84%)
 Frame = +2

Query: 128 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 307
           MRYVAAYLLAVLGGK +PA  D+EKILSSVG+E DAE+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 308 KLSSMPVGGG 337
           KLSSMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>AY119253-1|AAM51113.1|  113|Drosophila melanogaster SD22208p
           protein.
          Length = 113

 Score =  109 bits (261), Expect = 7e-24
 Identities = 53/70 (75%), Positives = 59/70 (84%)
 Frame = +2

Query: 128 MRYVAAYLLAVLGGKTTPAAADVEKILSSVGIEADAEKLKKVITELNGKDVEQLIAAGRE 307
           MRYVAAYLLAVLGGK +PA  D+EKILSSVG+E DAE+L KVI EL GK ++ LI  GRE
Sbjct: 1   MRYVAAYLLAVLGGKDSPANGDLEKILSSVGVEVDAERLTKVIKELAGKSIDDLIKEGRE 60

Query: 308 KLSSMPVGGG 337
           KLSSMPVGGG
Sbjct: 61  KLSSMPVGGG 70


>Z29361-1|CAA82545.1|  644|Drosophila melanogaster BTD protein.
          Length = 644

 Score = 33.1 bits (72), Expect = 0.55
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = -2

Query: 306 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 151
           S P++ S S S+  S   +F S SAS S PT      T+AAAG +    T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199


>AE014298-1363|AAF46518.1|  644|Drosophila melanogaster CG12653-PA
           protein.
          Length = 644

 Score = 33.1 bits (72), Expect = 0.55
 Identities = 21/52 (40%), Positives = 28/52 (53%)
 Frame = -2

Query: 306 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVVLPPSTAS 151
           S P++ S S S+  S   +F S SAS S PT      T+AAAG +    T+S
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGALAGSPTSS 199


>BT003783-1|AAO41464.1|  994|Drosophila melanogaster LP02833p
           protein.
          Length = 994

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 87  LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 188
           ++AL  +C LGL+ C+T     +  W+A+P   P
Sbjct: 783 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 816


>AY084183-1|AAL89921.1|  315|Drosophila melanogaster RE62247p
           protein.
          Length = 315

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 19/45 (42%), Positives = 25/45 (55%)
 Frame = -2

Query: 306 SRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAAGVV 172
           S P++ S S S+  S   +F S SAS S PT      T+AAAG +
Sbjct: 148 SAPSSASVSPSIFPSPAQSFASISASPSTPTTTLAPPTTAAAGAL 192


>AE014297-1651|AAF54925.1|  988|Drosophila melanogaster CG8773-PA
           protein.
          Length = 988

 Score = 31.1 bits (67), Expect = 2.2
 Identities = 12/34 (35%), Positives = 20/34 (58%)
 Frame = +3

Query: 87  LSALHVSCQLGLKKCVTWPRIYWLCWVARPRQLP 188
           ++AL  +C LGL+ C+T     +  W+A+P   P
Sbjct: 777 VTALSAACSLGLESCLTEAGEQFNAWLAKPEDRP 810


>AY069572-1|AAL39717.1|  510|Drosophila melanogaster LD31122p
           protein.
          Length = 510

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -2

Query: 336 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 181
           PPP GI++   + + +     LPL+ + T  + S+S++  T   I STSAAA
Sbjct: 412 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 460


>AY060416-1|AAL25455.1|  358|Drosophila melanogaster LD37618p
           protein.
          Length = 358

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -2

Query: 336 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 181
           PPP GI++   + + +     LPL+ + T  + S+S++  T   I STSAAA
Sbjct: 260 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 308


>AE014296-2923|AAF49329.1|  680|Drosophila melanogaster CG6311-PB
           protein.
          Length = 680

 Score = 30.7 bits (66), Expect = 2.9
 Identities = 19/52 (36%), Positives = 30/52 (57%)
 Frame = -2

Query: 336 PPPTGIDDSFSRPAAISCSTSLPLSSVITFLSFSASASIPTELRIFSTSAAA 181
           PPP GI++   + + +     LPL+ + T  + S+S++  T   I STSAAA
Sbjct: 582 PPPCGINEVAIKYSILPI---LPLNGISTATTSSSSSAAATPTPIASTSAAA 630


>AE014297-3702|AAF56388.3|  977|Drosophila melanogaster CG11819-PA
           protein.
          Length = 977

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 16/48 (33%), Positives = 27/48 (56%), Gaps = 1/48 (2%)
 Frame = +2

Query: 194 VEKILSSVGIEADAEKLKKV-ITELNGKDVEQLIAAGREKLSSMPVGG 334
           V KIL   G++  ++ +K++ +T  +GK   +LI      L S+PV G
Sbjct: 247 VNKILDVKGVKGLSKLMKEIAVTASSGKHDNELIGRAAITLKSIPVSG 294


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 28,575,767
Number of Sequences: 53049
Number of extensions: 439913
Number of successful extensions: 911
Number of sequences better than 10.0: 14
Number of HSP's better than 10.0 without gapping: 884
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 911
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4484945457
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)