Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B13
         (815 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937     31   1.1  
10_01_0129 + 1535823-1537196                                           31   1.4  
12_02_1167 + 26647293-26648356,26648493-26648577,26649129-266491...    30   1.9  
07_01_0008 - 56178-57095                                               28   7.7  
05_01_0004 - 34967-35149,35340-35501,36078-36225,36309-36385,365...    28   7.7  
02_04_0077 - 19491844-19492154,19492456-19492531,19492841-19492852     28   7.7  
01_05_0420 + 21969797-21970939,21971307-21971369,21971488-219716...    28   7.7  

>12_02_1166 + 26643045-26644078,26644238-26644322,26646800-26646937
          Length = 418

 Score = 31.1 bits (67), Expect = 1.1
 Identities = 15/33 (45%), Positives = 17/33 (51%)
 Frame = +1

Query: 394 FTGLPRNPAPVPISETSEAATSALPMTTTAVCT 492
           F   P +PAPVP S  S AA S  P   T  C+
Sbjct: 45  FLPAPPSPAPVPASPPSPAAESVAPCLLTLQCS 77


>10_01_0129 + 1535823-1537196
          Length = 457

 Score = 30.7 bits (66), Expect = 1.4
 Identities = 13/24 (54%), Positives = 18/24 (75%)
 Frame = +1

Query: 400 GLPRNPAPVPISETSEAATSALPM 471
           G P +P+PVP + TSEAA + LP+
Sbjct: 76  GEPPSPSPVPGTATSEAAVAGLPI 99


>12_02_1167 +
           26647293-26648356,26648493-26648577,26649129-26649191,
           26649381-26649443,26649987-26650070,26650229-26650783
          Length = 637

 Score = 30.3 bits (65), Expect = 1.9
 Identities = 14/29 (48%), Positives = 16/29 (55%)
 Frame = +1

Query: 406 PRNPAPVPISETSEAATSALPMTTTAVCT 492
           P +PAPVP S  S AA S  P   T  C+
Sbjct: 58  PPSPAPVPASPPSPAAESVAPCLLTLQCS 86


>07_01_0008 - 56178-57095
          Length = 305

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 15/40 (37%), Positives = 25/40 (62%), Gaps = 3/40 (7%)
 Frame = -1

Query: 566 SFFILCVWISRLST--PEVPGTEA-KEAVHTAVVVMGSAD 456
           +FF+L VW S L+T  P  P T +  + V+  +V++G+ D
Sbjct: 248 TFFLLFVWYSLLATRRPVAPVTTSDSDVVYEKIVLVGAKD 287


>05_01_0004 -
           34967-35149,35340-35501,36078-36225,36309-36385,
           36507-36577,36850-37263,37518-38268
          Length = 601

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 18/39 (46%), Positives = 21/39 (53%)
 Frame = +1

Query: 406 PRNPAPVPISETSEAATSALPMTTTAVCTASFASVPGTS 522
           PRN +P P    S+AA S LP TTT   T   A VP  +
Sbjct: 86  PRN-SPSPPKPPSQAAQSPLPPTTTTT-TPPTAPVPAAA 122


>02_04_0077 - 19491844-19492154,19492456-19492531,19492841-19492852
          Length = 132

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 13/31 (41%), Positives = 17/31 (54%)
 Frame = +1

Query: 415 PAPVPISETSEAATSALPMTTTAVCTASFAS 507
           PAP P +  +EA   A P TTTA    + A+
Sbjct: 83  PAPAPATAEAEAEAEAAPPTTTAAEAPAIAA 113


>01_05_0420 +
           21969797-21970939,21971307-21971369,21971488-21971616,
           21972241-21972291,21972669-21972809,21972922-21973122,
           21973201-21973419,21973582-21973700,21973772-21973862,
           21975864-21975965,21976291-21976315,21976522-21976592
          Length = 784

 Score = 28.3 bits (60), Expect = 7.7
 Identities = 14/38 (36%), Positives = 19/38 (50%)
 Frame = -1

Query: 518 VPGTEAKEAVHTAVVVMGSADVAASEVSEIGTGAGFRG 405
           V G E  E V   V   G++  A ++  E+G GAG  G
Sbjct: 142 VAGVERVEGVEEVVFAGGTSGEADADGDELGAGAGLMG 179


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,512,998
Number of Sequences: 37544
Number of extensions: 359011
Number of successful extensions: 1005
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 986
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1004
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2232933960
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)