Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B10
         (1138 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0686 - 30900748-30902167,30903442-30904742                       32   0.73 
01_06_1670 - 39007402-39008229,39008320-39008567,39009159-390093...    31   2.2  

>02_05_0686 - 30900748-30902167,30903442-30904742
          Length = 906

 Score = 32.3 bits (70), Expect = 0.73
 Identities = 12/20 (60%), Positives = 12/20 (60%)
 Frame = +3

Query: 462 PXPPPXXXRGXKKXXPPPPP 521
           P PPP    G KK  PPPPP
Sbjct: 362 PSPPPPPPPGGKKGGPPPPP 381


>01_06_1670 -
           39007402-39008229,39008320-39008567,39009159-39009364,
           39009454-39011054
          Length = 960

 Score = 30.7 bits (66), Expect = 2.2
 Identities = 11/23 (47%), Positives = 12/23 (52%)
 Frame = +3

Query: 453 FLXPXPPPXXXRGXKKXXPPPPP 521
           F+ P PPP    G     PPPPP
Sbjct: 409 FVQPPPPPTHTHGPPPPPPPPPP 431


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 12,770,491
Number of Sequences: 37544
Number of extensions: 269668
Number of successful extensions: 1232
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 453
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 862
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3444772820
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)