Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B06
         (965 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679           30   2.4  

>11_02_0136 + 8698577-8699400,8699525-8700360,8700520-8701679
          Length = 939

 Score = 30.3 bits (65), Expect = 2.4
 Identities = 22/95 (23%), Positives = 45/95 (47%), Gaps = 1/95 (1%)
 Frame = +3

Query: 192 DDLIYTTFRQDFPDLNVSNVKEHEIKS-NVNKVKWRMFCEKFKNIVEDYSFGTLLRVDCK 368
           D++I  + + +   +N   +K  +I+  +V   +WR+   +    +ED   G + RV+C 
Sbjct: 36  DEII--SLKDELSSMNAFLLKLSDIEELDVQVKEWRIQIRELSYDIEDCIDGFMHRVNCS 93

Query: 369 GDYSERNTMLVPRVQFYAIEIARNRENLNNEVKRL 473
            D S  NT    R   + +     R  ++N++ +L
Sbjct: 94  SDSS--NTKCFFRKVIHQVRTLGARHAISNDILKL 126


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 16,978,349
Number of Sequences: 37544
Number of extensions: 305964
Number of successful extensions: 580
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 574
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 580
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2799822860
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)