Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B06
         (965 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY071364-1|AAL48986.1|  160|Drosophila melanogaster RE39629p pro...   169   4e-42
AE014296-3544|AAF51730.1|  160|Drosophila melanogaster CG7519-PA...   169   4e-42
AY069433-1|AAL39578.1|  654|Drosophila melanogaster LD14121p pro...    31   3.1  
AE014297-4325|AAF56860.1|  654|Drosophila melanogaster CG11881-P...    31   3.1  

>AY071364-1|AAL48986.1|  160|Drosophila melanogaster RE39629p
           protein.
          Length = 160

 Score =  169 bits (412), Expect = 4e-42
 Identities = 81/152 (53%), Positives = 108/152 (71%)
 Frame = +3

Query: 54  LSRPAEEFGNXXXLEHLWAAKAIEYSDIHFNVLCSVDMRWLQLTPHDDLIYTTFRQDFPD 233
           LSRPAEEFGN   +E +WAAKA+E++++HFN++ SV    L+LTP+DD IY TFRQDFPD
Sbjct: 10  LSRPAEEFGNDTLVEEMWAAKALEHAEVHFNLITSVHPSQLKLTPYDDQIYATFRQDFPD 69

Query: 234 LNVSNVKEHEIKSNVNKVKWRMFCEKFKNIVEDYSFGTLLRVDCKGDYSERNTMLVPRVQ 413
           L+V  + +  +KS   K+KWR F EKF N ++DYS+GTL+R D   ++S  N++ V RVQ
Sbjct: 70  LHVGRLTDDILKSATAKLKWRQFAEKF-NKLDDYSYGTLMRADASREFSPDNSIFVFRVQ 128

Query: 414 FYAIEIARNRENLNNEVKRLFKCSSKNNTQSQ 509
           F AIEIARNRE LN+E     K + K   + Q
Sbjct: 129 FLAIEIARNREGLNDEAYEKHKPARKVPEEEQ 160


>AE014296-3544|AAF51730.1|  160|Drosophila melanogaster CG7519-PA
           protein.
          Length = 160

 Score =  169 bits (412), Expect = 4e-42
 Identities = 81/152 (53%), Positives = 108/152 (71%)
 Frame = +3

Query: 54  LSRPAEEFGNXXXLEHLWAAKAIEYSDIHFNVLCSVDMRWLQLTPHDDLIYTTFRQDFPD 233
           LSRPAEEFGN   +E +WAAKA+E++++HFN++ SV    L+LTP+DD IY TFRQDFPD
Sbjct: 10  LSRPAEEFGNDTLVEEMWAAKALEHAEVHFNLITSVHPSQLKLTPYDDQIYATFRQDFPD 69

Query: 234 LNVSNVKEHEIKSNVNKVKWRMFCEKFKNIVEDYSFGTLLRVDCKGDYSERNTMLVPRVQ 413
           L+V  + +  +KS   K+KWR F EKF N ++DYS+GTL+R D   ++S  N++ V RVQ
Sbjct: 70  LHVGRLTDDILKSATAKLKWRQFAEKF-NKLDDYSYGTLMRADASREFSPDNSIFVFRVQ 128

Query: 414 FYAIEIARNRENLNNEVKRLFKCSSKNNTQSQ 509
           F AIEIARNRE LN+E     K + K   + Q
Sbjct: 129 FLAIEIARNREGLNDEAYEKHKPARKVPEEEQ 160


>AY069433-1|AAL39578.1|  654|Drosophila melanogaster LD14121p
           protein.
          Length = 654

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 342 GTLL-RVDCKGDYSERNTMLVPRVQFYAIEIARNRENLNNEVKRLFKCSSKN 494
           GT+  ++D    Y+E N  +   +Q   +E++++   LNN +K+L + S K+
Sbjct: 310 GTIAEQLDANDHYNESNAFVTTDLQALRVELSQSEVQLNNLLKKLNEPSKKD 361


>AE014297-4325|AAF56860.1|  654|Drosophila melanogaster CG11881-PA
           protein.
          Length = 654

 Score = 30.7 bits (66), Expect = 3.1
 Identities = 15/52 (28%), Positives = 30/52 (57%), Gaps = 1/52 (1%)
 Frame = +3

Query: 342 GTLL-RVDCKGDYSERNTMLVPRVQFYAIEIARNRENLNNEVKRLFKCSSKN 494
           GT+  ++D    Y+E N  +   +Q   +E++++   LNN +K+L + S K+
Sbjct: 310 GTIAEQLDANDHYNESNAFVTTDLQALRVELSQSEVQLNNLLKKLNEPSKKD 361


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 29,574,165
Number of Sequences: 53049
Number of extensions: 558195
Number of successful extensions: 1025
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 998
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1023
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4833091908
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)