Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B03
         (1040 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_01_0100 + 1209424-1209538,1210373-1211073,1211158-1211379,121...    29   1.1  
12_02_0299 - 17051570-17052474,17053542-17053755                       31   1.5  
01_05_0490 + 22672241-22674679                                         31   2.0  
09_02_0603 - 11150739-11150746,11150791-11151340                       29   6.1  
12_02_1174 - 26696869-26698191                                         29   8.0  

>10_01_0100 +
           1209424-1209538,1210373-1211073,1211158-1211379,
           1211452-1211878,1212091-1213219,1213623-1213746,
           1214207-1214278,1215480-1215578,1215617-1215640,
           1215704-1215745,1215815-1215895,1215983-1216114,
           1216115-1216196,1216271-1216365,1218499-1218570,
           1218676-1218792,1219379-1219447,1219521-1219587,
           1219886-1220025
          Length = 1269

 Score = 28.7 bits (61), Expect(2) = 1.1
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = +2

Query: 749 PPPPPPXFFFXXXXXXXXXXXXXXXXXPXXXXPPPPPP 862
           PPPPPP                     P    PPPPPP
Sbjct: 586 PPPPPPPPLPNCLVPSPPPPPPPPPILPNRSVPPPPPP 623



 Score = 21.4 bits (43), Expect(2) = 1.1
 Identities = 7/11 (63%), Positives = 7/11 (63%)
 Frame = +2

Query: 734 KKKXXPPPPPP 766
           K    PPPPPP
Sbjct: 558 KPAFSPPPPPP 568


>12_02_0299 - 17051570-17052474,17053542-17053755
          Length = 372

 Score = 31.1 bits (67), Expect = 1.5
 Identities = 14/38 (36%), Positives = 14/38 (36%)
 Frame = +2

Query: 749 PPPPPPXFFFXXXXXXXXXXXXXXXXXPXXXXPPPPPP 862
           PPPPPP F F                      PPPPPP
Sbjct: 290 PPPPPPAFPFPFPQLPPLPHFPPLPSFYPSPPPPPPPP 327


>01_05_0490 + 22672241-22674679
          Length = 812

 Score = 30.7 bits (66), Expect = 2.0
 Identities = 13/43 (30%), Positives = 15/43 (34%)
 Frame = +2

Query: 734 KKKXXPPPPPPXFFFXXXXXXXXXXXXXXXXXPXXXXPPPPPP 862
           ++   PPPPPP   F                      PPPPPP
Sbjct: 605 RRPPPPPPPPPSSIFYNLFKKGGSKSRRIHSVAPPQPPPPPPP 647


>09_02_0603 - 11150739-11150746,11150791-11151340
          Length = 185

 Score = 29.1 bits (62), Expect = 6.1
 Identities = 11/30 (36%), Positives = 13/30 (43%)
 Frame = +1

Query: 508 PXKKXXXXXPPXXXXFFXXPPXKKXXPPPP 597
           P  +     PP    FF  PP  +  PPPP
Sbjct: 55  PLPQSGVPPPPPLGSFFVPPPQSRVPPPPP 84


>12_02_1174 - 26696869-26698191
          Length = 440

 Score = 28.7 bits (61), Expect = 8.0
 Identities = 13/38 (34%), Positives = 13/38 (34%)
 Frame = +2

Query: 749 PPPPPPXFFFXXXXXXXXXXXXXXXXXPXXXXPPPPPP 862
           PPPPPP                     P    PPPPPP
Sbjct: 123 PPPPPPPRTRTRVEPPHRPPPVKPQPPPSLPPPPPPPP 160


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 18,460,549
Number of Sequences: 37544
Number of extensions: 390097
Number of successful extensions: 7354
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1139
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4349
length of database: 14,793,348
effective HSP length: 83
effective length of database: 11,677,196
effective search space used: 3071102548
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)