Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_B02
         (874 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

10_07_0149 - 13417794-13417956,13418079-13418252,13418423-134186...    30   2.8  

>10_07_0149 -
           13417794-13417956,13418079-13418252,13418423-13418610,
           13418698-13418775,13418889-13418993,13419613-13419915
          Length = 336

 Score = 29.9 bits (64), Expect = 2.8
 Identities = 11/26 (42%), Positives = 15/26 (57%)
 Frame = -3

Query: 149 PWGPWGNYYFAHSWAANCQFRFGXNN 72
           PWGP+G   FAH++   C    G +N
Sbjct: 242 PWGPFGRVVFAHTFMDRCIKPAGWHN 267


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 8,193,330
Number of Sequences: 37544
Number of extensions: 134686
Number of successful extensions: 1326
Number of sequences better than 10.0: 1
Number of HSP's better than 10.0 without gapping: 515
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1189
length of database: 14,793,348
effective HSP length: 81
effective length of database: 11,752,284
effective search space used: 2456227356
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)