Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_A17
(909 letters)
Database: rice
37,544 sequences; 14,793,348 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
06_01_0903 - 6939672-6939782,6940051-6940110,6940221-6940322,694... 217 8e-57
07_03_1373 - 26110436-26110584,26110585-26110752,26110829-261108... 104 8e-23
08_02_0801 + 21349434-21349438,21349952-21349978,21351175-213512... 89 6e-18
04_04_0677 + 27195264-27195291,27196034-27196271,27196350-271965... 31 0.96
09_01_0079 - 1159963-1160211,1160303-1160509,1160631-1160801,116... 29 3.9
04_01_0041 - 464695-464850,467485-469029 29 6.7
03_05_0058 + 20356902-20356928,20357328-20357786,20357888-203581... 29 6.7
01_03_0205 + 13777918-13778015,13778402-13778624,13779022-137791... 29 6.7
01_02_0116 - 11252220-11253313,11253398-11253559,11253977-112543... 29 6.7
09_04_0187 - 15403048-15403237,15403808-15403959,15404052-154042... 28 8.9
>06_01_0903 -
6939672-6939782,6940051-6940110,6940221-6940322,
6940464-6940513,6940686-6940750,6940849-6940931,
6941117-6941140,6941798-6941856,6942041-6942174,
6942823-6942884,6942908-6942976
Length = 272
Score = 217 bits (531), Expect = 8e-57
Identities = 100/246 (40%), Positives = 157/246 (63%), Gaps = 1/246 (0%)
Frame = +3
Query: 123 NKLKSSQRDKVKKFVAFTQTSESTAIYCLSQNDWKLDLASDNYFQNPDAYYKDSIKTSVD 302
+KL RDKV++F+ T SE A+ L +DW L+ A D ++ P +S
Sbjct: 24 HKLGRGSRDKVQQFMTITGASEKVALQALKASDWHLEGAFDFFYSQPQISLTNS------ 77
Query: 303 RKKLEQLFNKYRDQQELDKITADGVMKFLEDLNLSPESILVLIIAWKCKAAVQCEFTKDE 482
+ LE L+N+Y++ ++D I +GV +F DL + P+ I++L+I+W KAA CEFT+ E
Sbjct: 78 -RHLEDLYNRYKEP-DVDMIMVEGVSQFCTDLQVDPQDIVMLVISWHMKAATMCEFTRQE 135
Query: 483 FIMGMVELAVDGLDKLKAKLPTLESELKDLNKFKDFYHFTFNYAKNAGQKGLDLDMAIVY 662
FI G+ + VD ++KL+ KLP+L +E+KD +KF++ Y+F F +A+ GQK L L+ A+
Sbjct: 136 FIGGLQSIGVDSIEKLREKLPSLRAEIKDDHKFREIYNFAFAWAREKGQKSLALETALGM 195
Query: 663 WNIVLRGR-FKFLDAWCKFLTEHHKRSIPKDTWNLLLDFATQIDDGMSHYDAEGAWPVLI 839
W ++ R + +D WC+FL H ++I +DTW+ LL+F ID +S+YD EGAWP LI
Sbjct: 196 WQLLFAERHWPLIDHWCQFLQVRHNKAISRDTWSQLLEFVKTIDPQLSNYDEEGAWPYLI 255
Query: 840 DDFVKW 857
D+FV++
Sbjct: 256 DEFVEY 261
>07_03_1373 -
26110436-26110584,26110585-26110752,26110829-26110896,
26111755-26111800,26111929-26112025,26112802-26112884,
26112987-26113062,26113147-26113195,26113517-26113601,
26114247-26114331
Length = 301
Score = 104 bits (250), Expect = 8e-23
Identities = 49/129 (37%), Positives = 80/129 (62%), Gaps = 8/129 (6%)
Frame = +3
Query: 492 GMVELA--VDGLDKLK----AKLPTLES--ELKDLNKFKDFYHFTFNYAKNAGQKGLDLD 647
G+ EL+ +DG++ L+ + +P L S +L D ++F FY F F ++ GQK + +
Sbjct: 42 GLAELSQVIDGMEGLRDAIFSDIPKLMSALDLDDAHRFSIFYDFVFFISRENGQKNISVQ 101
Query: 648 MAIVYWNIVLRGRFKFLDAWCKFLTEHHKRSIPKDTWNLLLDFATQIDDGMSHYDAEGAW 827
A+ W +VL GRF LD WC F+ ++ + +I +D W LL F+ +++ + YD +GAW
Sbjct: 102 RAVGAWRMVLNGRFWLLDRWCNFVEKYQRYNITEDVWQQLLAFSRCVNEDLEGYDPKGAW 161
Query: 828 PVLIDDFVK 854
PVL+DDFV+
Sbjct: 162 PVLVDDFVE 170
>08_02_0801 +
21349434-21349438,21349952-21349978,21351175-21351249,
21351333-21351369,21351469-21351552,21351821-21351881,
21351961-21352067,21352162-21352227,21352366-21352461
Length = 185
Score = 88.6 bits (210), Expect = 6e-18
Identities = 50/170 (29%), Positives = 89/170 (52%), Gaps = 4/170 (2%)
Frame = +3
Query: 360 ITADGVMKFLEDLNLSPESILVLIIAWKCKAAVQCEFTKDEFIMGMVELAVDGLDKLKAK 539
I+ +G+ L + + +L++AWK Q FT DE+ G+ L D ++KLK
Sbjct: 10 ISPEGIETLCSHLEVPHTDVRILMLAWKMGCEKQGYFTLDEWRSGLKALRADTINKLKKA 69
Query: 540 LPTLESELKDLNKFKDFYHFTFNYAKNAGQKG-LDLDMAIVYWNIVLRGRFK-FLDAWCK 713
P L E+ + F+DFY + F Y +K +++ +A N+VL +F+ +D
Sbjct: 70 FPELVQEVTRPSNFQDFYPYAFRYCLTEDKKKCIEIPVACELLNLVLGLQFRPQVDKLVN 129
Query: 714 FLTEHHK-RSIPKDTWNLLLDFATQID-DGMSHYDAEGAWPVLIDDFVKW 857
+L + + I D W L F +I+ + +YD++ AWP+++D+FV+W
Sbjct: 130 YLKHQSEYKVINMDQWMGFLRFCNEINFPSLDNYDSDLAWPLILDNFVEW 179
>04_04_0677 +
27195264-27195291,27196034-27196271,27196350-27196500,
27196578-27196972,27197270-27197339,27197414-27197696,
27197972-27198297,27198409-27199368
Length = 816
Score = 31.5 bits (68), Expect = 0.96
Identities = 13/39 (33%), Positives = 23/39 (58%), Gaps = 1/39 (2%)
Frame = -1
Query: 303 YPLRFLWNLCSTHR-GFGSNCRWPDLISNRFVRDNILLC 190
YPL ++C+T+ G SNC+ PD+ V+ +++C
Sbjct: 397 YPLALADDVCNTNSTGGSSNCQDPDVFIRSLVQGKVIIC 435
>09_01_0079 -
1159963-1160211,1160303-1160509,1160631-1160801,
1161732-1161869,1162184-1162273,1162354-1162431,
1162510-1163166,1163245-1163363,1164305-1164584
Length = 662
Score = 29.5 bits (63), Expect = 3.9
Identities = 23/83 (27%), Positives = 39/83 (46%), Gaps = 4/83 (4%)
Frame = +3
Query: 99 NYENP----VKMNKLKSSQRDKVKKFVAFTQTSESTAIYCLSQNDWKLDLASDNYFQNPD 266
N+E+P + +L + D + +V Q + + + L A+D Y QN +
Sbjct: 265 NFESPDDAAQAVQELNGKKFDDKEWYVGRAQKKSEREMELKEKFEKNLQEAADKY-QNTN 323
Query: 267 AYYKDSIKTSVDRKKLEQLFNKY 335
Y K+ + SVD KL +LF +Y
Sbjct: 324 LYLKN-LDDSVDDDKLRELFAEY 345
>04_01_0041 - 464695-464850,467485-469029
Length = 566
Score = 28.7 bits (61), Expect = 6.7
Identities = 23/109 (21%), Positives = 43/109 (39%), Gaps = 1/109 (0%)
Frame = +3
Query: 207 LSQNDWKLDLASDNYFQNPDAYYKDSIKTSVDRKKLEQLFNKYR-DQQELDKITADGVMK 383
L + K ++ N++ + D + T++ + L QL Y Q E + + V
Sbjct: 176 LQEEKLKCEVVKSNWYSFSNLLVGDMMDTALPMQSLGQLVPSYNLAQSENENLLIQQVRS 235
Query: 384 FLEDLNLSPESILVLIIAWKCKAAVQCEFTKDEFIMGMVELAVDGLDKL 530
+ S L W+ K V + GM++ +DG+DK+
Sbjct: 236 WCR-FKFSANYFLSKPYQWR-KYMVDAPTYQGFHFQGMIKQQIDGVDKM 282
>03_05_0058 +
20356902-20356928,20357328-20357786,20357888-20358169,
20358188-20358505
Length = 361
Score = 28.7 bits (61), Expect = 6.7
Identities = 41/172 (23%), Positives = 68/172 (39%), Gaps = 9/172 (5%)
Frame = +3
Query: 75 EIAEKVIRNYENPVKMNKLKSSQRDKVKKFVAFTQTSESTAIYCLSQN-DWKLDLASDNY 251
++ EK+ RN N V +N+ S D + A +T + +S+ D +++++
Sbjct: 12 KLIEKLTRNGRNAVAINEHIFSTVDGIIGTFALGETYAAEEFKDISETMDLLSSSSAEDF 71
Query: 252 FQNPDA-YYKDSIKTSVDRK-----KLEQLFNKYRDQQELDKITADGVMKFLEDLNLSPE 413
F A D + R+ KL++ F + DQ + D S
Sbjct: 72 FPGSVAGRLVDRLTGLAARREAIFRKLDRFFERIVDQHAAADDDGPAAARRKADDKGSAG 131
Query: 414 SILV--LIIAWKCKAAVQCEFTKDEFIMGMVELAVDGLDKLKAKLPTLESEL 563
S LV LI WK + + FTKD +++ V G+ L SEL
Sbjct: 132 SDLVHELIDLWKMEGNTKQGFTKDHVKAMLLDTFVGGITTTSVTLHWAMSEL 183
>01_03_0205 +
13777918-13778015,13778402-13778624,13779022-13779198,
13779277-13779437,13779520-13780519,13780923-13781069,
13781149-13781376,13781471-13781628,13781807-13782161
Length = 848
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/59 (28%), Positives = 31/59 (52%), Gaps = 1/59 (1%)
Frame = +3
Query: 630 KGLDLDMAIVYWNIVLRGRFKFLDAWCKFLTEHHKRSIPKDTW-NLLLDFATQIDDGMS 803
+G +V ++LR +F L+AW L + H+R+ P D + +LLD ++ +S
Sbjct: 714 EGKSRSATVVLAYLMLRKKFTLLEAW-NMLKKVHRRAHPNDGFAKVLLDLDKKLHGKIS 771
>01_02_0116 -
11252220-11253313,11253398-11253559,11253977-11254306,
11254328-11254377,11255195-11255389,11255532-11255625,
11255713-11255961,11256831-11256892,11257434-11257534,
11257766-11257880,11258384-11258475,11259197-11259333,
11259721-11259760
Length = 906
Score = 28.7 bits (61), Expect = 6.7
Identities = 17/52 (32%), Positives = 30/52 (57%)
Frame = +3
Query: 288 KTSVDRKKLEQLFNKYRDQQELDKITADGVMKFLEDLNLSPESILVLIIAWK 443
K S + K+ Q+F + E +++ AD V KFL DL + + I+V + +W+
Sbjct: 732 KESFESCKI-QVFCIAEEDTEAEELKAD-VKKFLYDLRMQADVIVVTVKSWE 781
>09_04_0187 -
15403048-15403237,15403808-15403959,15404052-15404210,
15404422-15404562
Length = 213
Score = 28.3 bits (60), Expect = 8.9
Identities = 14/36 (38%), Positives = 20/36 (55%), Gaps = 3/36 (8%)
Frame = -3
Query: 406 LKFRSSKNFMTPSAVILSSSCWSLYLLKS---CSSF 308
L SSK + ++ SSSCWSL+L+ C S+
Sbjct: 19 LNMASSKWVLGALCLVASSSCWSLWLISQVPMCKSY 54
Database: rice
Posted date: Oct 4, 2007 10:57 AM
Number of letters in database: 14,793,348
Number of sequences in database: 37,544
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 20,417,467
Number of Sequences: 37544
Number of extensions: 402903
Number of successful extensions: 1089
Number of sequences better than 10.0: 10
Number of HSP's better than 10.0 without gapping: 1054
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1086
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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