Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_A16
         (918 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY069073-1|AAL39218.1|  324|Drosophila melanogaster GH09096p pro...   124   2e-28
AE014296-1835|AAF50143.2|  324|Drosophila melanogaster CG32066-P...   124   2e-28
AE014296-1834|AAF50146.2|  324|Drosophila melanogaster CG32066-P...   124   2e-28
AJ537450-1|CAD61328.1|  109|Drosophila melanogaster CG6487-white...   101   2e-21
AY349653-1|AAQ64936.1| 1028|Drosophila melanogaster Toll protein.      29   8.9  

>AY069073-1|AAL39218.1|  324|Drosophila melanogaster GH09096p
           protein.
          Length = 324

 Score =  124 bits (299), Expect = 2e-28
 Identities = 57/75 (76%), Positives = 67/75 (89%)
 Frame = +2

Query: 284 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 463
           MGKLLSLLSRD+S+CC++  YD+FLDFENAAPT TER VYD+V+RVL ESE +L+EIQ Y
Sbjct: 1   MGKLLSLLSRDDSNCCAAKSYDVFLDFENAAPTETERAVYDEVERVLRESEVVLDEIQIY 60

Query: 464 KGAGKEIREAIXDPS 508
           +GAGKEIREAI DPS
Sbjct: 61  RGAGKEIREAIADPS 75



 Score = 30.3 bits (65), Expect = 3.9
 Identities = 20/50 (40%), Positives = 23/50 (46%)
 Frame = +1

Query: 547 PLVN*LLCCYNHSP*LPXVVXPIAGVPXXEGQGXPRNTLNNNXALVKXFA 696
           PLVN L  CY HS  L  +V  + G     G+  P   L    ALVK  A
Sbjct: 88  PLVNKLKRCYEHSMELDKIVPKLLG-QLVGGKLNPTQHLETQQALVKQLA 136


>AE014296-1835|AAF50143.2|  324|Drosophila melanogaster CG32066-PC,
           isoform C protein.
          Length = 324

 Score =  124 bits (299), Expect = 2e-28
 Identities = 57/75 (76%), Positives = 67/75 (89%)
 Frame = +2

Query: 284 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 463
           MGKLLSLLSRD+S+CC++  YD+FLDFENAAPT TER VYD+V+RVL ESE +L+EIQ Y
Sbjct: 1   MGKLLSLLSRDDSNCCAAKSYDVFLDFENAAPTETERAVYDEVERVLRESEVVLDEIQIY 60

Query: 464 KGAGKEIREAIXDPS 508
           +GAGKEIREAI DPS
Sbjct: 61  RGAGKEIREAIADPS 75



 Score = 30.3 bits (65), Expect = 3.9
 Identities = 20/50 (40%), Positives = 23/50 (46%)
 Frame = +1

Query: 547 PLVN*LLCCYNHSP*LPXVVXPIAGVPXXEGQGXPRNTLNNNXALVKXFA 696
           PLVN L  CY HS  L  +V  + G     G+  P   L    ALVK  A
Sbjct: 88  PLVNKLKRCYEHSMELDKIVPKLLG-QLVGGKLNPTQHLETQQALVKQLA 136


>AE014296-1834|AAF50146.2|  324|Drosophila melanogaster CG32066-PB,
           isoform B protein.
          Length = 324

 Score =  124 bits (299), Expect = 2e-28
 Identities = 57/75 (76%), Positives = 67/75 (89%)
 Frame = +2

Query: 284 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 463
           MGKLLSLLSRD+S+CC++  YD+FLDFENAAPT TER VYD+V+RVL ESE +L+EIQ Y
Sbjct: 1   MGKLLSLLSRDDSNCCAAKSYDVFLDFENAAPTETERAVYDEVERVLRESEVVLDEIQIY 60

Query: 464 KGAGKEIREAIXDPS 508
           +GAGKEIREAI DPS
Sbjct: 61  RGAGKEIREAIADPS 75



 Score = 30.3 bits (65), Expect = 3.9
 Identities = 20/50 (40%), Positives = 23/50 (46%)
 Frame = +1

Query: 547 PLVN*LLCCYNHSP*LPXVVXPIAGVPXXEGQGXPRNTLNNNXALVKXFA 696
           PLVN L  CY HS  L  +V  + G     G+  P   L    ALVK  A
Sbjct: 88  PLVNKLKRCYEHSMELDKIVPKLLG-QLVGGKLNPTQHLETQQALVKQLA 136


>AJ537450-1|CAD61328.1|  109|Drosophila melanogaster CG6487-white
           chimeric protein protein.
          Length = 109

 Score =  101 bits (241), Expect = 2e-21
 Identities = 45/62 (72%), Positives = 55/62 (88%)
 Frame = +2

Query: 284 MGKLLSLLSRDESHCCSSPRYDIFLDFENAAPTMTERDVYDDVQRVLLESEKILEEIQCY 463
           MGKLLSLLSRD+S+CC++  YD+FLDFENAAPT TER VYD+V+RVL ESE +L+EIQ Y
Sbjct: 1   MGKLLSLLSRDDSNCCAAKSYDVFLDFENAAPTETERAVYDEVERVLRESEVVLDEIQIY 60

Query: 464 KG 469
           +G
Sbjct: 61  RG 62


>AY349653-1|AAQ64936.1| 1028|Drosophila melanogaster Toll protein.
          Length = 1028

 Score = 29.1 bits (62), Expect = 8.9
 Identities = 26/104 (25%), Positives = 46/104 (44%), Gaps = 7/104 (6%)
 Frame = -2

Query: 470 HLYNTVSLLISSRILTGLFGHRRKHRVRSLWARHSRNPRIYHIEA---TSSNATRHAIKD 300
           H  N   L +   +LTG+ G    +    +    SRN R+  I++    S+N  RH   D
Sbjct: 319 HTTNLTDLRLEDNLLTGISGDIFSNLGNLVTLVMSRN-RLRTIDSRAFVSTNGLRHLHLD 377

Query: 299 ----SIIFPFL*ISLRSEYSHPQNTLHGPKDRIFKTALLNFIYH 180
                +  P L I+L+++ + P   +HG      +   + F+Y+
Sbjct: 378 HNDIDLQQPLLDITLQTQINSPFGDMHGLLTLNLRNNSIRFVYN 421


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 32,520,787
Number of Sequences: 53049
Number of extensions: 605075
Number of successful extensions: 1425
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 1383
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1425
length of database: 24,988,368
effective HSP length: 85
effective length of database: 20,479,203
effective search space used: 4505424660
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)