Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_A15
         (908 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

02_05_0533 - 29818276-29818866                                         29   5.1  
02_05_0434 + 28954230-28954350,28954488-28954570,28954676-289548...    29   5.1  
11_08_0007 + 27551173-27551828,27552071-27552282,27553371-275535...    29   6.7  
12_02_1128 - 26341118-26341204,26341302-26341441,26341567-263416...    28   8.9  
08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544     28   8.9  
03_05_0488 - 24847076-24847220,24847823-24847872,24848139-248482...    28   8.9  

>02_05_0533 - 29818276-29818866
          Length = 196

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 21/74 (28%), Positives = 35/74 (47%), Gaps = 2/74 (2%)
 Frame = +2

Query: 467 CVELCLVDSTERNNVIVVKVKQYAEMLEENILAPYKFFYEKKDFYIFF--DLCISRGMLR 640
           CVE  LVD+  R   +VV+      ++E    + Y+   E+ + +  F  +  I    L 
Sbjct: 90  CVETSLVDAPRRAMDVVVRNVSLRGLIEVEERSTYRPHPERPEEWTQFRQETTIRCRPLS 149

Query: 641 TNAAVAQSINTACS 682
             AAVA+ + T C+
Sbjct: 150 ALAAVAEKVETRCA 163


>02_05_0434 +
           28954230-28954350,28954488-28954570,28954676-28954805,
           28955144-28955223,28955329-28955415,28956092-28956145,
           28956238-28956315,28956511-28956616,28956717-28956862,
           28956991-28957113
          Length = 335

 Score = 29.1 bits (62), Expect = 5.1
 Identities = 18/60 (30%), Positives = 26/60 (43%)
 Frame = +2

Query: 332 SCIITQQNSLKSDYFREGRLKLCSKSLLFEPRDWTYPLIKLQFRDCVELCLVDSTERNNV 511
           SC +  Q+  +  +F  G   L +K++     DW Y     Q  DC   C  DST  N +
Sbjct: 271 SCFVHCQSETQETWFASGSPMLETKTIADAVGDWFYDRNPFQKIDCPYPC--DSTCHNRI 328


>11_08_0007 +
           27551173-27551828,27552071-27552282,27553371-27553550,
           27555154-27556187
          Length = 693

 Score = 28.7 bits (61), Expect = 6.7
 Identities = 10/19 (52%), Positives = 12/19 (63%)
 Frame = -3

Query: 183 NYCLNINQNKGLFCNVSAG 127
           +YC+N    KG  CN SAG
Sbjct: 259 SYCVNATNGKGYLCNCSAG 277


>12_02_1128 -
           26341118-26341204,26341302-26341441,26341567-26341663,
           26341755-26341830,26341919-26342118,26342199-26342297,
           26342395-26342479,26342786-26343024,26343233-26343403,
           26343605-26343848,26343980-26344253,26344755-26344934,
           26345342-26345423,26346209-26346278,26346802-26346901,
           26347003-26347097,26347181-26347317,26347342-26347420,
           26347591-26347651,26348580-26349009
          Length = 981

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 413 LFEPRDWTYPLIKLQFRDCVELC-LVDSTER 502
           L +PR W  P+ +  F DC E+  L DS ER
Sbjct: 646 LLKPRGWKPPVRRQFFLDCNEIADLCDSAER 676


>08_02_0421 - 16932354-16932427,16932909-16933076,16933443-16934544
          Length = 447

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 12/24 (50%), Positives = 14/24 (58%)
 Frame = -2

Query: 688 CSGACSVDALSNCCICPKHSSADA 617
           C G C+  A S  C CPK SS +A
Sbjct: 380 CYGVCTNTAGSYACSCPKGSSGNA 403


>03_05_0488 -
           24847076-24847220,24847823-24847872,24848139-24848278,
           24848358-24848493,24848584-24848683,24848837-24848949,
           24849034-24849132,24849227-24849311,24849799-24850037,
           24850202-24850372,24850544-24850784,24850899-24851172,
           24851481-24851660,24852170-24852251,24852336-24852437,
           24853315-24853384,24853725-24853824,24853931-24854025,
           24854105-24854184,24854361-24854439,24854603-24854663,
           24855570-24855984
          Length = 1018

 Score = 28.3 bits (60), Expect = 8.9
 Identities = 14/31 (45%), Positives = 18/31 (58%), Gaps = 1/31 (3%)
 Frame = +2

Query: 413 LFEPRDWTYPLIKLQFRDCVELC-LVDSTER 502
           L +PR W  P+ +  F DC E+  L DS ER
Sbjct: 655 LLKPRGWKPPVRRQFFLDCNEIADLCDSAER 685


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,533,733
Number of Sequences: 37544
Number of extensions: 368271
Number of successful extensions: 897
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 874
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 897
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2577242800
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)