Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_A15
         (908 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

X96586-1|CAA65405.1|  917|Homo sapiens FAN protein protein.            65   4e-10
BC041124-1|AAH41124.1|  917|Homo sapiens neutral sphingomyelinas...    65   4e-10

>X96586-1|CAA65405.1|  917|Homo sapiens FAN protein protein.
          Length = 917

 Score = 64.9 bits (151), Expect = 4e-10
 Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 13/221 (5%)
 Frame = +2

Query: 275 KSRFSMLLLEPGEIYFEDYSCIITQQNSLKSDYFREGRLKLCSKSLLFEPRDWTYPLIKL 454
           K RFS+LLL   E YFE +            +    G LK+CSKS++FEP   + P+IK+
Sbjct: 18  KERFSLLLLNLEEYYFEQHRANHILHKGSHHERKIRGSLKICSKSVIFEPDSISQPIIKI 77

Query: 455 QFRDCVELCLVDSTERN--------NVIVVKVKQYAEMLEENILAPYKFFYEKKDFYIFF 610
             RDC+++        N          I +   Q   + E N++APYK    K ++   F
Sbjct: 78  PLRDCIKIGKHGENGANRHFTKAKSGGISLIFSQVYFIKEHNVVAPYKIERGKMEY--VF 135

Query: 611 DLCISRGMLRTNAAVAQSINTACSGTQQYGGYNIAFKVYEDEV*SGYD----G*FTEEIV 778
           +L +   +      + Q    +C          I   +      + +D       +E++ 
Sbjct: 136 ELDVPGKVEDVVETLLQLHRASCLDKLGDQTAMITAILQSRLARTSFDKNRFQNISEKLH 195

Query: 779 CELQAEKISPLVRHQGKLALT-PQLXFQPSVYREXPILKIS 898
            E +AE ++PLV + G + +T   L FQP      P+++I+
Sbjct: 196 MECKAEMVTPLVTNPGHVCITDTNLYFQPLNGYPKPVVQIT 236


>BC041124-1|AAH41124.1|  917|Homo sapiens neutral sphingomyelinase
           (N-SMase) activation associated factor protein.
          Length = 917

 Score = 64.9 bits (151), Expect = 4e-10
 Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 13/221 (5%)
 Frame = +2

Query: 275 KSRFSMLLLEPGEIYFEDYSCIITQQNSLKSDYFREGRLKLCSKSLLFEPRDWTYPLIKL 454
           K RFS+LLL   E YFE +            +    G LK+CSKS++FEP   + P+IK+
Sbjct: 18  KERFSLLLLNLEEYYFEQHRANHILHKGSHHERKIRGSLKICSKSVIFEPDSISQPIIKI 77

Query: 455 QFRDCVELCLVDSTERN--------NVIVVKVKQYAEMLEENILAPYKFFYEKKDFYIFF 610
             RDC+++        N          I +   Q   + E N++APYK    K ++   F
Sbjct: 78  PLRDCIKIGKHGENGANRHFTKAKSGGISLIFSQVYFIKEHNVVAPYKIERGKMEY--VF 135

Query: 611 DLCISRGMLRTNAAVAQSINTACSGTQQYGGYNIAFKVYEDEV*SGYD----G*FTEEIV 778
           +L +   +      + Q    +C          I   +      + +D       +E++ 
Sbjct: 136 ELDVPGKVEDVVETLLQLHRASCLDKLGDQTAMITAILQSRLARTSFDKNRFQNISEKLH 195

Query: 779 CELQAEKISPLVRHQGKLALT-PQLXFQPSVYREXPILKIS 898
            E +AE ++PLV + G + +T   L FQP      P+++I+
Sbjct: 196 MECKAEMVTPLVTNPGHVCITDTNLYFQPLNGYPKPVVQIT 236


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 111,162,184
Number of Sequences: 237096
Number of extensions: 2184894
Number of successful extensions: 4307
Number of sequences better than 10.0: 2
Number of HSP's better than 10.0 without gapping: 4193
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 4303
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11770329464
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)