Bombyx BLAST Result against human

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_A13
         (892 letters)

Database: human 
           237,096 sequences; 76,859,062 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AK223405-1|BAD97125.1|  214|Homo sapiens haloacid dehalogenase-l...   127   5e-29
BC012494-1|AAH12494.1|  214|Homo sapiens haloacid dehalogenase-l...   127   6e-29
M86934-1|AAA58622.1|  214|Homo sapiens GS1 protein.                   126   1e-28

>AK223405-1|BAD97125.1|  214|Homo sapiens haloacid dehalogenase-like
           hydrolase domain containing 1A variant protein.
          Length = 214

 Score =  127 bits (307), Expect = 5e-29
 Identities = 66/171 (38%), Positives = 101/171 (59%)
 Frame = +3

Query: 321 LYTVGFQKVASRYGKKFTFELKSRIMGQQTREFAGNIIKYLDLPLTIEDFVSETRQIFEE 500
           LY+V FQ++ +RY KK+++++KS +MG++  E A  II  L LP++ E+ V E++   +E
Sbjct: 11  LYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE 70

Query: 501 LFPQSEILPGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKHQDLFDLFSHKTLGLFRS 680
           +FP + ++PG +KLI HL +H IP  LATSS   S+++KT +H++ F LFSH  LG    
Sbjct: 71  VFPTAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLG-DDP 129

Query: 681 RREEXESHTXXXXXXXXXXXRXTGIXKVSRFEDSINGVKXXXXXGMQVVMV 833
             +  +                  + K   FED+ NGV+     GMQVVMV
Sbjct: 130 EVQHGKPDPGIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMV 180


>BC012494-1|AAH12494.1|  214|Homo sapiens haloacid dehalogenase-like
           hydrolase domain containing 1A protein.
          Length = 214

 Score =  127 bits (306), Expect = 6e-29
 Identities = 66/171 (38%), Positives = 101/171 (59%)
 Frame = +3

Query: 321 LYTVGFQKVASRYGKKFTFELKSRIMGQQTREFAGNIIKYLDLPLTIEDFVSETRQIFEE 500
           LY+V FQ++ +RY KK+++++KS +MG++  E A  II  L LP++ E+ V E++   +E
Sbjct: 11  LYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE 70

Query: 501 LFPQSEILPGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKHQDLFDLFSHKTLGLFRS 680
           +FP + ++PG +KLI HL +H IP  LATSS   S+++KT +H++ F LFSH  LG    
Sbjct: 71  VFPTAALMPGAEKLIIHLRKHGIPFALATSSRSASFDMKTSRHKEFFSLFSHIVLG-DDP 129

Query: 681 RREEXESHTXXXXXXXXXXXRXTGIXKVSRFEDSINGVKXXXXXGMQVVMV 833
             +  +                  + K   FED+ NGV+     GMQVVMV
Sbjct: 130 EVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQVVMV 180


>M86934-1|AAA58622.1|  214|Homo sapiens GS1 protein.
          Length = 214

 Score =  126 bits (304), Expect = 1e-28
 Identities = 65/171 (38%), Positives = 100/171 (58%)
 Frame = +3

Query: 321 LYTVGFQKVASRYGKKFTFELKSRIMGQQTREFAGNIIKYLDLPLTIEDFVSETRQIFEE 500
           LY+V FQ++ +RY KK+++++KS +MG++  E A  II  L LP++ E+ V E++   +E
Sbjct: 11  LYSVVFQEICNRYDKKYSWDVKSLVMGKKALEAAQIIIDVLQLPMSKEELVEESQTKLKE 70

Query: 501 LFPQSEILPGVKKLIYHLNQHNIPMGLATSSSKESYELKTLKHQDLFDLFSHKTLGLFRS 680
           +FP + ++PG +KLI HL +H IP  LATSS   S+++KT +H++ F LFSH  LG    
Sbjct: 71  VFPMAALMPGAEKLIIHLRKHGIPFALATSSGSASFDMKTSRHKEFFSLFSHIVLG-DDP 129

Query: 681 RREEXESHTXXXXXXXXXXXRXTGIXKVSRFEDSINGVKXXXXXGMQVVMV 833
             +  +                  + K   FED+ NGV+     GMQ VMV
Sbjct: 130 EVQHGKPDPDIFLACAKRFSPPPAMEKCLVFEDAPNGVEAALAAGMQAVMV 180


  Database: human
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 76,859,062
  Number of sequences in database:  237,096
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 106,472,635
Number of Sequences: 237096
Number of extensions: 2060635
Number of successful extensions: 3488
Number of sequences better than 10.0: 3
Number of HSP's better than 10.0 without gapping: 3407
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 3479
length of database: 76,859,062
effective HSP length: 90
effective length of database: 55,520,422
effective search space used: 11437206932
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)