Last updated: 2022/11/18
BLASTX 2.2.12 [Aug-07-2005]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= fdpeP19_F_A08
(854 letters)
Database: celegans
27,780 sequences; 12,740,198 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis def... 36 0.028
U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis def... 36 0.028
AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein. 36 0.028
AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical ... 29 3.2
AF000298-11|AAM97960.1| 518|Caenorhabditis elegans Prion-like-(... 29 3.2
AF000298-10|AAM97961.1| 539|Caenorhabditis elegans Prion-like-(... 29 3.2
AF000298-8|AAC48255.2| 524|Caenorhabditis elegans Prion-like-(q... 29 3.2
U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin cyt... 29 4.2
U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin cyt... 29 4.2
AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical ... 29 4.2
Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical pr... 29 5.6
Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical pr... 29 5.6
U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA bi... 29 5.6
AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical ... 28 7.4
AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical ... 28 7.4
AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical ... 28 7.4
AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical ... 28 7.4
AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical ... 28 9.7
>U40187-5|AAS80343.1| 1437|Caenorhabditis elegans Cytokinesis defect
protein 1, isoformb protein.
Length = 1437
Score = 36.3 bits (80), Expect = 0.028
Identities = 22/55 (40%), Positives = 22/55 (40%)
Frame = +3
Query: 408 PXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXPXXGXKKKXP 572
P GG P PPPGG K GPP PPPP G P KK P
Sbjct: 762 PPPPGGCPPPPPPPPPGGFK---GGPP---PPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 35.5 bits (78), Expect = 0.049
Identities = 20/46 (43%), Positives = 20/46 (43%)
Frame = +3
Query: 408 PXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXP 545
P GG P PPPGG GPP PPPP G GG P
Sbjct: 720 PPITGGPPPP---PPPGGLPPITGGPP--PPPPPGGLPPISGGPPP 760
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/55 (38%), Positives = 21/55 (38%)
Frame = +3
Query: 408 PXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXPXXGXKKKXP 572
P GG P PPPGG GPP PPPP G P G K P
Sbjct: 736 PPITGGPPPP---PPPGGLPPISGGPPP--PPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 447 PPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXP 545
PPP G GPP PPPP G GG P
Sbjct: 714 PPPPGLPPITGGPP--PPPPPGGLPPITGGPPP 744
>U40187-4|AAS80342.1| 1435|Caenorhabditis elegans Cytokinesis defect
protein 1, isoforma protein.
Length = 1435
Score = 36.3 bits (80), Expect = 0.028
Identities = 22/55 (40%), Positives = 22/55 (40%)
Frame = +3
Query: 408 PXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXPXXGXKKKXP 572
P GG P PPPGG K GPP PPPP G P KK P
Sbjct: 762 PPPPGGCPPPPPPPPPGGFK---GGPP---PPPPPGMFAPMAPVIPDYLPPKKVP 810
Score = 35.5 bits (78), Expect = 0.049
Identities = 20/46 (43%), Positives = 20/46 (43%)
Frame = +3
Query: 408 PXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXP 545
P GG P PPPGG GPP PPPP G GG P
Sbjct: 720 PPITGGPPPP---PPPGGLPPITGGPP--PPPPPGGLPPISGGPPP 760
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/55 (38%), Positives = 21/55 (38%)
Frame = +3
Query: 408 PXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXPXXGXKKKXP 572
P GG P PPPGG GPP PPPP G P G K P
Sbjct: 736 PPITGGPPPP---PPPGGLPPISGGPPP--PPPPPGGCPPPPPPPPPGGFKGGPP 785
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 447 PPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXP 545
PPP G GPP PPPP G GG P
Sbjct: 714 PPPPGLPPITGGPP--PPPPPGGLPPITGGPPP 744
>AF062008-1|AAC17501.1| 1018|Caenorhabditis elegans unknown protein.
Length = 1018
Score = 36.3 bits (80), Expect = 0.028
Identities = 22/55 (40%), Positives = 22/55 (40%)
Frame = +3
Query: 408 PXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXPXXGXKKKXP 572
P GG P PPPGG K GPP PPPP G P KK P
Sbjct: 345 PPPPGGCPPPPPPPPPGGFK---GGPP---PPPPPGMFAPMAPVIPDYLPPKKVP 393
Score = 35.5 bits (78), Expect = 0.049
Identities = 20/46 (43%), Positives = 20/46 (43%)
Frame = +3
Query: 408 PXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXP 545
P GG P PPPGG GPP PPPP G GG P
Sbjct: 303 PPITGGPPPP---PPPGGLPPITGGPP--PPPPPGGLPPISGGPPP 343
Score = 33.5 bits (73), Expect = 0.20
Identities = 21/55 (38%), Positives = 21/55 (38%)
Frame = +3
Query: 408 PXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXPXXGXKKKXP 572
P GG P PPPGG GPP PPPP G P G K P
Sbjct: 319 PPITGGPPPP---PPPGGLPPISGGPPP--PPPPPGGCPPPPPPPPPGGFKGGPP 368
Score = 31.1 bits (67), Expect = 1.0
Identities = 15/33 (45%), Positives = 15/33 (45%)
Frame = +3
Query: 447 PPPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXP 545
PPP G GPP PPPP G GG P
Sbjct: 297 PPPPGLPPITGGPP--PPPPPGGLPPITGGPPP 327
>AL032652-4|CAB63398.1| 486|Caenorhabditis elegans Hypothetical
protein Y63D3A.5 protein.
Length = 486
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/42 (40%), Positives = 18/42 (42%), Gaps = 5/42 (11%)
Frame = +3
Query: 423 GGPXXKKXPPPGGX-KXXXXGPPXKXP----PPPXGXXKKWG 533
GGP PPPGG GPP P PPP G +G
Sbjct: 404 GGPGGYGPPPPGGPGAPGSYGPPQGGPGGFGPPPPGGPGAYG 445
>AF000298-11|AAM97960.1| 518|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform b protein.
Length = 518
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 413 PXXGGPPXXKXSPPXGXXXPXXGAPXKKXPPPPXXXXKMGGXXPXXGXXKKTPXG 577
P G PP PP G P A PPPP G P P G
Sbjct: 275 PPTGSPPP----PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 325
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 431 GAPPXXGRFFLXXPXPPKXNPPX*XLSF*RGGNSPPP 321
G+PP P PP+ +PP L + G SPPP
Sbjct: 287 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 323
>AF000298-10|AAM97961.1| 539|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform c protein.
Length = 539
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 413 PXXGGPPXXKXSPPXGXXXPXXGAPXKKXPPPPXXXXKMGGXXPXXGXXKKTPXG 577
P G PP PP G P A PPPP G P P G
Sbjct: 296 PPTGSPPP----PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 346
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 431 GAPPXXGRFFLXXPXPPKXNPPX*XLSF*RGGNSPPP 321
G+PP P PP+ +PP L + G SPPP
Sbjct: 308 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 344
>AF000298-8|AAC48255.2| 524|Caenorhabditis elegans
Prion-like-(q/n-rich)-domain-bearingprotein protein 75,
isoform a protein.
Length = 524
Score = 29.5 bits (63), Expect = 3.2
Identities = 17/55 (30%), Positives = 17/55 (30%)
Frame = +2
Query: 413 PXXGGPPXXKXSPPXGXXXPXXGAPXKKXPPPPXXXXKMGGXXPXXGXXKKTPXG 577
P G PP PP G P A PPPP G P P G
Sbjct: 281 PPTGSPPP----PPAGGSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPPAG 331
Score = 29.5 bits (63), Expect = 3.2
Identities = 14/37 (37%), Positives = 18/37 (48%)
Frame = -1
Query: 431 GAPPXXGRFFLXXPXPPKXNPPX*XLSF*RGGNSPPP 321
G+PP P PP+ +PP L + G SPPP
Sbjct: 293 GSPPPPRAGSPPPPPPPRGSPPTGSLPPPQAGGSPPP 329
>U58751-5|AAN84882.1| 781|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform b
protein.
Length = 781
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 428 PPXXKXSPPXGXXXPXXGAPXKKXPPPP 511
PP PP G GAP PPPP
Sbjct: 630 PPPPPPPPPMGLPAVGAGAPPPPPPPPP 657
>U58751-4|AAN84881.1| 607|Caenorhabditis elegans Wasp (actin
cytoskeleton modulator)homolog protein 1, isoform a
protein.
Length = 607
Score = 29.1 bits (62), Expect = 4.2
Identities = 12/28 (42%), Positives = 12/28 (42%)
Frame = +2
Query: 428 PPXXKXSPPXGXXXPXXGAPXKKXPPPP 511
PP PP G GAP PPPP
Sbjct: 456 PPPPPPPPPMGLPAVGAGAPPPPPPPPP 483
>AF003386-9|AAB54259.1| 1621|Caenorhabditis elegans Hypothetical
protein F59E12.9 protein.
Length = 1621
Score = 29.1 bits (62), Expect = 4.2
Identities = 17/50 (34%), Positives = 19/50 (38%)
Frame = +3
Query: 366 GGVXFWGXGXX*KKPXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXG 515
GG+ W G P GG + PP G G P PPPP G
Sbjct: 1564 GGMNGWRGG-----PPPPRGGSHCQGPPPLMGGPPPRLGMPPPGPPPPNG 1608
Score = 28.7 bits (61), Expect = 5.6
Identities = 15/41 (36%), Positives = 16/41 (39%), Gaps = 1/41 (2%)
Frame = -1
Query: 485 GPPXXGFXXPXGG-XFFXXGAPPXXGRFFLXXPXPPKXNPP 366
GPP G P GG + G PP G P P PP
Sbjct: 1553 GPPMGGLPPPHGGMNGWRGGPPPPRGGSHCQGPPPLMGGPP 1593
Score = 27.9 bits (59), Expect = 9.7
Identities = 14/33 (42%), Positives = 14/33 (42%)
Frame = +2
Query: 413 PXXGGPPXXKXSPPXGXXXPXXGAPXKKXPPPP 511
P GGPP PP G P G PPPP
Sbjct: 1587 PLMGGPPPRLGMPPPGPPPPNGG------PPPP 1613
>Z72502-7|CAA96592.1| 140|Caenorhabditis elegans Hypothetical
protein C08B6.10 protein.
Length = 140
Score = 28.7 bits (61), Expect = 5.6
Identities = 13/30 (43%), Positives = 15/30 (50%)
Frame = +3
Query: 426 GPXXKKXPPPGGXKXXXXGPPXKXPPPPXG 515
GP ++ PPP GPP PPPP G
Sbjct: 114 GPWWRRPPPP-------WGPPPPGPPPPFG 136
>Z46676-8|CAB60993.2| 388|Caenorhabditis elegans Hypothetical
protein C08B11.5 protein.
Length = 388
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +3
Query: 402 KKPXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXG--XXKKWGGXXPXXGXKKKXPX 575
+ P G PPP G G P PPPP GG P + P
Sbjct: 286 RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 345
Query: 576 G 578
G
Sbjct: 346 G 346
>U24189-3|AAC47514.1| 398|Caenorhabditis elegans RRM-type RNA
binding protein protein.
Length = 398
Score = 28.7 bits (61), Expect = 5.6
Identities = 17/61 (27%), Positives = 19/61 (31%), Gaps = 2/61 (3%)
Frame = +3
Query: 402 KKPXXXGGGPXXKKXPPPGGXKXXXXGPPXKXPPPPXG--XXKKWGGXXPXXGXKKKXPX 575
+ P G PPP G G P PPPP GG P + P
Sbjct: 296 RPPPPPSSGMWPPPPPPPPGRTPGPPGMPGMPPPPPPSRFGPPGMGGMPPPPPPGMRYPG 355
Query: 576 G 578
G
Sbjct: 356 G 356
>AL132864-1|CAB63392.1| 613|Caenorhabditis elegans Hypothetical
protein Y53H1A.1 protein.
Length = 613
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/32 (37%), Positives = 12/32 (37%)
Frame = +3
Query: 450 PPGGXKXXXXGPPXKXPPPPXGXXKKWGGXXP 545
P G GPP PPPP W G P
Sbjct: 84 PSGPPVYHNQGPPRGYPPPPPQGADTWRGAPP 115
>AF098501-3|AAM69106.1| 275|Caenorhabditis elegans Hypothetical
protein H28G03.2c protein.
Length = 275
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 429 PXXKKXPPPGGXKXXXXGPPXKXPPPPXG 515
P PPPG PP PPPP G
Sbjct: 77 PHHMGMPPPGMGPPPFMPPPIGMPPPPLG 105
>AF098501-2|AAM69105.1| 298|Caenorhabditis elegans Hypothetical
protein H28G03.2b protein.
Length = 298
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 429 PXXKKXPPPGGXKXXXXGPPXKXPPPPXG 515
P PPPG PP PPPP G
Sbjct: 100 PHHMGMPPPGMGPPPFMPPPIGMPPPPLG 128
>AF098501-1|AAC67404.2| 548|Caenorhabditis elegans Hypothetical
protein H28G03.2a protein.
Length = 548
Score = 28.3 bits (60), Expect = 7.4
Identities = 12/29 (41%), Positives = 12/29 (41%)
Frame = +3
Query: 429 PXXKKXPPPGGXKXXXXGPPXKXPPPPXG 515
P PPPG PP PPPP G
Sbjct: 350 PHHMGMPPPGMGPPPFMPPPIGMPPPPLG 378
>AL132904-4|CAC35836.2| 582|Caenorhabditis elegans Hypothetical
protein Y111B2A.8 protein.
Length = 582
Score = 27.9 bits (59), Expect = 9.7
Identities = 12/32 (37%), Positives = 14/32 (43%)
Frame = +2
Query: 485 PXKKXPPPPXXXXKMGGXXPXXGXXKKTPXGG 580
P +K PPPP + GG P T GG
Sbjct: 507 PCQKPPPPPPQSQQAGGGGPPTRNASGTSTGG 538
Database: celegans
Posted date: Oct 23, 2007 1:18 PM
Number of letters in database: 12,740,198
Number of sequences in database: 27,780
Lambda K H
0.318 0.134 0.401
Gapped
Lambda K H
0.279 0.0580 0.190
Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 13,211,936
Number of Sequences: 27780
Number of extensions: 280931
Number of successful extensions: 745
Number of sequences better than 10.0: 18
Number of HSP's better than 10.0 without gapping: 301
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 574
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2129473654
frameshift window, decay const: 40, 0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)
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