Bombyx BLAST Result against rice

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_A01
         (898 letters)

Database: rice 
           37,544 sequences; 14,793,348 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

08_01_0411 + 3670758-3672365                                           33   0.31 
03_06_0003 + 30921197-30921388,30921514-30921632,30921742-309218...    31   1.2  
10_08_0043 - 14390398-14391531,14391850-14393691,14393800-143968...    30   2.2  
08_02_1581 - 28004060-28004449,28004730-28004888,28004933-280050...    29   3.8  
09_04_0717 + 19706160-19706327,19707036-19707157,19707408-197075...    29   5.0  

>08_01_0411 + 3670758-3672365
          Length = 535

 Score = 33.1 bits (72), Expect = 0.31
 Identities = 15/47 (31%), Positives = 21/47 (44%)
 Frame = +2

Query: 368 CYYLGGLEESATGILGELSKPLSWSMPADKICEKLKKKDAQICDLRF 508
           CY   G    A  +   + KP  W MP +K    +    +Q+ DLRF
Sbjct: 261 CYAKNGCAREALAVFNRMLKPHVWVMPNEKTFSSVISACSQLGDLRF 307


>03_06_0003 + 30921197-30921388,30921514-30921632,30921742-30921811,
            30922078-30922161,30922258-30922344,30922431-30922501,
            30922648-30922702,30923374-30923509,30925009-30925103,
            30925203-30925357,30925435-30925543,30925761-30925817,
            30925913-30926027,30926177-30926264,30926738-30927501,
            30927600-30927688,30928315-30928422,30928550-30928657,
            30928887-30928977,30929235-30929287,30929557-30929712,
            30930763-30930825,30931491-30931535,30932075-30932130,
            30933051-30933132,30933238-30933354,30933428-30933530,
            30933912-30934062,30934180-30934417,30934564-30934764,
            30934850-30934935,30935036-30935135
          Length = 1347

 Score = 31.1 bits (67), Expect = 1.2
 Identities = 22/66 (33%), Positives = 29/66 (43%), Gaps = 1/66 (1%)
 Frame = +3

Query: 207  RWSYHFEKVIAKCV*KL*RSLPPRYQMM*RKTXKKSRQN-SKSSVKVQRTKKIDFVTI*E 383
            +WS  F   IAKC+ K  R  P   +M+  K  +K     SK   K++  KKI      E
Sbjct: 988  KWSLLFHDFIAKCLTKDPRLRPAASEMLKHKFIEKCNPGASKMLAKIKEAKKIRAKVAAE 1047

Query: 384  VSKSQP 401
               S P
Sbjct: 1048 TELSGP 1053


>10_08_0043 - 14390398-14391531,14391850-14393691,14393800-14396825,
            14397510-14397609
          Length = 2033

 Score = 30.3 bits (65), Expect = 2.2
 Identities = 35/127 (27%), Positives = 56/127 (44%), Gaps = 4/127 (3%)
 Frame = +2

Query: 137  SSNTRSKMFEFSLFHLLFLATAV-QVVLSLREGDCEVCVKTVEKFAATLSDDVKKDXKKI 313
            S N   K +   L  +L    A+ +  L++ +  C+     +E   A LS   +KD + +
Sbjct: 1434 SENNNLKEYFIYLIEILSAQLALSEFDLNINKSICQELASELESCMAQLS---QKDDELL 1490

Query: 314  EAEFKKFCKGSKNKENRFCYYLGGLE---ESATGILGELSKPLSWSMPADKICEKLKKKD 484
            EAE K      KN+E   C  +G L+   E A  +  EL K ++       + E+   KD
Sbjct: 1491 EAEDKVHLLQGKNRE--LCGVVGSLQVAIEGAKIVKEELEKKIT------TLTEEGNTKD 1542

Query: 485  AQICDLR 505
             +I  LR
Sbjct: 1543 GEISLLR 1549


>08_02_1581 -
           28004060-28004449,28004730-28004888,28004933-28005044,
           28005160-28005236,28005525-28006076
          Length = 429

 Score = 29.5 bits (63), Expect = 3.8
 Identities = 25/93 (26%), Positives = 41/93 (44%)
 Frame = +2

Query: 155 KMFEFSLFHLLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDXKKIEAEFKKF 334
           K+      H+  LA  VQ+  S   G  E+  K  ++F + +S  +KK+ + I +  K  
Sbjct: 52  KILASQAHHIHELAKEVQINFS---GYMEMQRKEEKRFGSMISS-LKKENQDIRSMLKIA 107

Query: 335 CKGSKNKENRFCYYLGGLEESATGILGELSKPL 433
               +  ENR C   G  ++  + IL    K L
Sbjct: 108 VTEKEAAENRLCVLKGDKDQGRSAILQIAEKGL 140


>09_04_0717 +
           19706160-19706327,19707036-19707157,19707408-19707510,
           19707644-19707734,19707960-19708132,19708534-19708622,
           19708995-19709085,19709272-19709361,19709807-19709854,
           19710033-19710104,19710181-19710274,19710350-19710494,
           19710809-19710951,19711601-19711751,19712276-19712449,
           19712799-19712874
          Length = 609

 Score = 29.1 bits (62), Expect = 5.0
 Identities = 14/45 (31%), Positives = 23/45 (51%)
 Frame = -2

Query: 513 LSNLRSQICASFFFNFSHILSAGIDQLKGFDNSPKMPVADSSRPP 379
           LS L S +  ++F N    L AG+  ++  D S  +  + S +PP
Sbjct: 424 LSGLTS-VTRNYFENLVQTLEAGLQDVRATDQSASVSTSSSKKPP 467


  Database: rice
    Posted date:  Oct 4, 2007 10:57 AM
  Number of letters in database: 14,793,348
  Number of sequences in database:  37,544
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 19,984,377
Number of Sequences: 37544
Number of extensions: 356729
Number of successful extensions: 749
Number of sequences better than 10.0: 5
Number of HSP's better than 10.0 without gapping: 733
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 748
length of database: 14,793,348
effective HSP length: 82
effective length of database: 11,714,740
effective search space used: 2530383840
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)