Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP19_F_A01
         (898 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical...   154   7e-38
Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical pr...    32   0.64 
U40417-7|AAA81416.1|  103|Caenorhabditis elegans Saposin-like pr...    31   0.85 
U64842-1|AAB37083.2|  710|Caenorhabditis elegans Hypothetical pr...    29   3.4  
Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical p...    29   4.5  
AF016444-8|AAB65934.1|  219|Caenorhabditis elegans Hypothetical ...    29   4.5  
AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical ...    28   7.9  

>AC024817-44|AAK93864.2|  168|Caenorhabditis elegans Hypothetical
           protein Y54G2A.23 protein.
          Length = 168

 Score =  154 bits (374), Expect = 7e-38
 Identities = 73/161 (45%), Positives = 98/161 (60%), Gaps = 1/161 (0%)
 Frame = +2

Query: 182 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDXKKIEAEFKKFCKGSKNKEN 361
           L+ L + V VV S     CEVC K ++   A +    K     I    ++ C+ ++NKEN
Sbjct: 4   LVLLISLVIVVASAAAPQCEVCKKVLDDVMAKVPAGDKSKPDAIGKVIREHCETTRNKEN 63

Query: 362 RFCYYLGGLEESATGILGELSKPLSWSMPADKIC-EKLKKKDAQICDLRFDKQIDLNNXX 538
           +FC+Y+G L ESAT I+ E++KPLSWSMP +K+C EKLK KDAQIC+L++DK +D     
Sbjct: 64  KFCFYIGALPESATSIMNEVTKPLSWSMPTEKVCLEKLKGKDAQICELKYDKPLDWKTID 123

Query: 539 XXXXXXXXXXXXXNDWDEVCDGCIEKTDXIKRIEELKPKYM 661
                         +W EVC GC EK + IKRIEELKPKY+
Sbjct: 124 LKKMRVKELKNILGEWGEVCKGCTEKAELIKRIEELKPKYV 164


>Z37092-4|CAA85455.1|  890|Caenorhabditis elegans Hypothetical
           protein F44F4.4 protein.
          Length = 890

 Score = 31.9 bits (69), Expect = 0.64
 Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 2/88 (2%)
 Frame = +2

Query: 191 LATAVQVVLSLREGDC--EVCVKTVEKFAATLSDDVKKDXKKIEAEFKKFCKGSKNKENR 364
           + TA+ +  S+  G    E  +K V K +  +S + K +   +E  F +FC+G       
Sbjct: 84  ITTAILIRSSITNGSLLEEQRLKEVVKVSDFISTNFKLNVSGVEKNFNQFCRGFCQANEP 143

Query: 365 FCYYLGGLEESATGILGELSKPLSWSMP 448
              Y  GL+         +SK +  S P
Sbjct: 144 VRQYYNGLQILGKNQTDGISKRIDLSYP 171


>U40417-7|AAA81416.1|  103|Caenorhabditis elegans Saposin-like
           protein family protein4 protein.
          Length = 103

 Score = 31.5 bits (68), Expect = 0.85
 Identities = 16/50 (32%), Positives = 26/50 (52%)
 Frame = +2

Query: 182 LLFLATAVQVVLSLREGDCEVCVKTVEKFAATLSDDVKKDXKKIEAEFKK 331
           L+F+ATAV +        C++C   V+K+  ++  DV    K  + E KK
Sbjct: 10  LVFVATAVVLPHQRNSLGCQMCELAVKKYDGSVDKDVNGIKKDFDTECKK 59


>U64842-1|AAB37083.2|  710|Caenorhabditis elegans Hypothetical
           protein F25B4.5 protein.
          Length = 710

 Score = 29.5 bits (63), Expect = 3.4
 Identities = 12/32 (37%), Positives = 21/32 (65%), Gaps = 1/32 (3%)
 Frame = +3

Query: 126 YNTRVQILAQKCLNLVCFIYY-FWLRLCRWSY 218
           +  RV+IL  +CL + C +Y  FW++  RW++
Sbjct: 399 HEERVKILFDRCL-IPCSLYEEFWIKYARWTW 429


>Z71262-12|CAA95808.1|  545|Caenorhabditis elegans Hypothetical
           protein F22D6.3a protein.
          Length = 545

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 35/105 (33%), Positives = 48/105 (45%), Gaps = 4/105 (3%)
 Frame = +2

Query: 191 LATAVQVVL-SLREGDCEVCVKTVE--KFAATLSDDVKKDXKKIEAEFKKFCK-GSKNKE 358
           LAT VQ +L S   G+  +  K+ E   +       +KK  KK EAE KK  K G + KE
Sbjct: 23  LATLVQAMLISKNSGEFLMKKKSEEGESWEPAAKAAIKKAVKKYEAEVKKLEKAGCREKE 82

Query: 359 NRFCYYLGGLEESATGILGELSKPLSWSMPADKICEKLKKKDAQI 493
                +   LEE A  I   L K L       KI E ++ +D ++
Sbjct: 83  AEEAQH-AALEE-AKKITFSLDKSLP-EAKVIKIGESVQHRDQRV 124


>AF016444-8|AAB65934.1|  219|Caenorhabditis elegans Hypothetical
           protein C36C5.12 protein.
          Length = 219

 Score = 29.1 bits (62), Expect = 4.5
 Identities = 14/37 (37%), Positives = 21/37 (56%)
 Frame = +2

Query: 242 VCVKTVEKFAATLSDDVKKDXKKIEAEFKKFCKGSKN 352
           +C++ +  FAA + D++  D K    EFKK C   KN
Sbjct: 59  LCIERLRDFAAKV-DELDMDKKSELKEFKKTCDSLKN 94


>AF022973-9|AAC25802.2| 1373|Caenorhabditis elegans Hypothetical
            protein F25G6.9 protein.
          Length = 1373

 Score = 28.3 bits (60), Expect = 7.9
 Identities = 31/95 (32%), Positives = 46/95 (48%), Gaps = 3/95 (3%)
 Frame = +2

Query: 251  KTVEKFAATLSDDVKKDXKKIEAEFKKFCK---GSKNKENRFCYYLGGLEESATGILGEL 421
            +++EKF   L    KKD K+IE   KK  +    + N E R   Y G  E +     G  
Sbjct: 930  ESIEKFFNGLISSPKKDLKEIEQNNKKVLEKLWNNGNNEVRRKIYEGLAELALISGTGR- 988

Query: 422  SKPLSWSMPADKICEKLKKKDAQICDLRFDKQIDL 526
            SK +   +PA K+ E + K   Q+    FDK+I++
Sbjct: 989  SKMV---IPAGKLPEGILKGILQL----FDKKINV 1016


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 17,897,396
Number of Sequences: 27780
Number of extensions: 351184
Number of successful extensions: 911
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 879
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 909
length of database: 12,740,198
effective HSP length: 81
effective length of database: 10,490,018
effective search space used: 2276333906
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)