Bombyx BLAST Result against fruitfly

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P22
         (1240 letters)

Database: fruitfly 
           53,049 sequences; 24,988,368 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY119096-1|AAM50956.1|  397|Drosophila melanogaster LP12305p pro...    97   6e-20
AE014297-3263|AAO41592.1|  363|Drosophila melanogaster CG17119-P...    97   6e-20
AE014297-3262|AAF56088.2|  397|Drosophila melanogaster CG17119-P...    97   6e-20
AE013599-3457|AAF46894.2| 1227|Drosophila melanogaster CG30268-P...    33   1.1  

>AY119096-1|AAM50956.1|  397|Drosophila melanogaster LP12305p protein.
          Length = 397

 Score = 96.7 bits (230), Expect = 6e-20
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
 Frame = +1

Query: 430  SSHRIRFCLVVMIILGIPSAHSQLDKMYVEVTDLNLLVEETRLLKLVQIGQYNTSLEVIS 609
            S+HR+   L+++++  +   ++Q  ++ V+  D+ +L+       +   G  ++ +EV  
Sbjct: 4    STHRLT-TLLLLLLATVALGNAQSSQLTVDSHDITVLLNSNETFLVFANGLLDSDVEVAL 62

Query: 610  NIQHPDIVQLVPPSIEIPGSNEPNKTVVISYDICAYGKSPGHSEVTFNVTPPGFVNLDTV 789
                 D + L P +   P  +  N++VVI+      G   G+ +V  +        +  V
Sbjct: 63   GTDSEDHLLLDPATFVYPAGSTRNQSVVIT------GLKAGNVKVVADSDDANKEIVKDV 116

Query: 790  YLRITVMHSNEINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVVXLNFXFWPLNIM-XS 966
            ++R+TV  S  +   S I GW+YF AWSVSFYPQI+ N++RKSV  LNF F  LNI+  +
Sbjct: 117  FVRVTVAKSRALIYTSIIFGWVYFVAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIVGFT 176

Query: 967  PCTPFQLWTVFX*XXXNEYSXVIP 1038
              + F     F     NEY    P
Sbjct: 177  LYSMFNCGLYFIEDLQNEYEVRYP 200


>AE014297-3263|AAO41592.1|  363|Drosophila melanogaster CG17119-PB,
            isoform B protein.
          Length = 363

 Score = 96.7 bits (230), Expect = 6e-20
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
 Frame = +1

Query: 430  SSHRIRFCLVVMIILGIPSAHSQLDKMYVEVTDLNLLVEETRLLKLVQIGQYNTSLEVIS 609
            S+HR+   L+++++  +   ++Q  ++ V+  D+ +L+       +   G  ++ +EV  
Sbjct: 4    STHRLT-TLLLLLLATVALGNAQSSQLTVDSHDITVLLNSNETFLVFANGLLDSDVEVAL 62

Query: 610  NIQHPDIVQLVPPSIEIPGSNEPNKTVVISYDICAYGKSPGHSEVTFNVTPPGFVNLDTV 789
                 D + L P +   P  +  N++VVI+      G   G+ +V  +        +  V
Sbjct: 63   GTDSEDHLLLDPATFVYPAGSTRNQSVVIT------GLKAGNVKVVADSDDANKEIVKDV 116

Query: 790  YLRITVMHSNEINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVVXLNFXFWPLNIM-XS 966
            ++R+TV  S  +   S I GW+YF AWSVSFYPQI+ N++RKSV  LNF F  LNI+  +
Sbjct: 117  FVRVTVAKSRALIYTSIIFGWVYFVAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIVGFT 176

Query: 967  PCTPFQLWTVFX*XXXNEYSXVIP 1038
              + F     F     NEY    P
Sbjct: 177  LYSMFNCGLYFIEDLQNEYEVRYP 200


>AE014297-3262|AAF56088.2|  397|Drosophila melanogaster CG17119-PA,
            isoform A protein.
          Length = 397

 Score = 96.7 bits (230), Expect = 6e-20
 Identities = 61/204 (29%), Positives = 102/204 (50%), Gaps = 1/204 (0%)
 Frame = +1

Query: 430  SSHRIRFCLVVMIILGIPSAHSQLDKMYVEVTDLNLLVEETRLLKLVQIGQYNTSLEVIS 609
            S+HR+   L+++++  +   ++Q  ++ V+  D+ +L+       +   G  ++ +EV  
Sbjct: 4    STHRLT-TLLLLLLATVALGNAQSSQLTVDSHDITVLLNSNETFLVFANGLLDSDVEVAL 62

Query: 610  NIQHPDIVQLVPPSIEIPGSNEPNKTVVISYDICAYGKSPGHSEVTFNVTPPGFVNLDTV 789
                 D + L P +   P  +  N++VVI+      G   G+ +V  +        +  V
Sbjct: 63   GTDSEDHLLLDPATFVYPAGSTRNQSVVIT------GLKAGNVKVVADSDDANKEIVKDV 116

Query: 790  YLRITVMHSNEINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVVXLNFXFWPLNIM-XS 966
            ++R+TV  S  +   S I GW+YF AWSVSFYPQI+ N++RKSV  LNF F  LNI+  +
Sbjct: 117  FVRVTVAKSRALIYTSIIFGWVYFVAWSVSFYPQIWSNYRRKSVEGLNFDFLALNIVGFT 176

Query: 967  PCTPFQLWTVFX*XXXNEYSXVIP 1038
              + F     F     NEY    P
Sbjct: 177  LYSMFNCGLYFIEDLQNEYEVRYP 200


>AE013599-3457|AAF46894.2| 1227|Drosophila melanogaster CG30268-PA
            protein.
          Length = 1227

 Score = 32.7 bits (71), Expect = 1.1
 Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 1/63 (1%)
 Frame = +1

Query: 457  VVMIILGIPSAHSQLDKMYVE-VTDLNLLVEETRLLKLVQIGQYNTSLEVISNIQHPDIV 633
            +VM  LGIP   S+LD + +E + DL + +  +       + Q N ++E +  I HP   
Sbjct: 891  IVMEDLGIPEKDSRLDPIILEMIADLGVTIYLSTNYSQFILSQDNMNIEKVELIMHPSKK 950

Query: 634  QLV 642
            ++V
Sbjct: 951  KIV 953


  Database: fruitfly
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 24,988,368
  Number of sequences in database:  53,049
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 52,509,069
Number of Sequences: 53049
Number of extensions: 1130615
Number of successful extensions: 2943
Number of sequences better than 10.0: 4
Number of HSP's better than 10.0 without gapping: 2735
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 2915
length of database: 24,988,368
effective HSP length: 87
effective length of database: 20,373,105
effective search space used: 6621259125
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)