Bombyx BLAST Result against celegans

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P22
         (1240 letters)

Database: celegans 
           27,780 sequences; 12,740,198 total letters

Searching..................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical pr...    86   6e-17
Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical pr...    86   6e-17
AC024781-2|AAK39328.2|  311|Caenorhabditis elegans Hypothetical ...    35   0.14 
U40412-1|AAA81395.1|  570|Caenorhabditis elegans Temporarily ass...    30   2.9  
Z70271-7|CAJ80829.1|  559|Caenorhabditis elegans Hypothetical pr...    29   9.0  
Z70271-6|CAA94232.1|  562|Caenorhabditis elegans Hypothetical pr...    29   9.0  

>Z48045-5|CAD56564.1|  374|Caenorhabditis elegans Hypothetical protein
            C41C4.7b protein.
          Length = 374

 Score = 85.8 bits (203), Expect = 6e-17
 Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
 Frame = +1

Query: 772  VNLDTVYLRITVMHSNEINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVVXLNFXFWPL 951
            ++L+  + RITV+ S+ + I+  I+GW YF AWS+SFYPQ+Y+NFKRKSVV LNF F  L
Sbjct: 108  LDLEDAFARITVIRSHFLAILIQIVGWTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSL 167

Query: 952  NIM-XSPCTPFQLWTVFX*XXXNEYSXVIP 1038
            N++       F L   +     NEY+ V P
Sbjct: 168  NLVGFCAYAIFNLLMYYNSHVKNEYNIVNP 197



 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +1

Query: 820 EINIISYI--MGWIYFAAWSVSFYPQIYINFKRKSVV 924
           +I ++S++  + +I  A     ++PQ Y N+ RKS V
Sbjct: 261 KIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTV 297


>Z48045-4|CAA88102.2|  404|Caenorhabditis elegans Hypothetical protein
            C41C4.7a protein.
          Length = 404

 Score = 85.8 bits (203), Expect = 6e-17
 Identities = 42/90 (46%), Positives = 58/90 (64%), Gaps = 1/90 (1%)
 Frame = +1

Query: 772  VNLDTVYLRITVMHSNEINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVVXLNFXFWPL 951
            ++L+  + RITV+ S+ + I+  I+GW YF AWS+SFYPQ+Y+NFKRKSVV LNF F  L
Sbjct: 108  LDLEDAFARITVIRSHFLAILIQIVGWTYFFAWSISFYPQMYLNFKRKSVVGLNFDFLSL 167

Query: 952  NIM-XSPCTPFQLWTVFX*XXXNEYSXVIP 1038
            N++       F L   +     NEY+ V P
Sbjct: 168  NLVGFCAYAIFNLLMYYNSHVKNEYNIVNP 197



 Score = 29.1 bits (62), Expect = 6.8
 Identities = 12/37 (32%), Positives = 22/37 (59%), Gaps = 2/37 (5%)
 Frame = +1

Query: 820 EINIISYI--MGWIYFAAWSVSFYPQIYINFKRKSVV 924
           +I ++S++  + +I  A     ++PQ Y N+ RKS V
Sbjct: 261 KIQLLSFVTSLSYIKMAVTCCKYFPQAYFNYTRKSTV 297


>AC024781-2|AAK39328.2|  311|Caenorhabditis elegans Hypothetical
           protein Y43H11AL.2 protein.
          Length = 311

 Score = 34.7 bits (76), Expect = 0.14
 Identities = 12/41 (29%), Positives = 24/41 (58%)
 Frame = +1

Query: 820 EINIISYIMGWIYFAAWSVSFYPQIYINFKRKSVVXLNFXF 942
           ++ ++ +I+G I  A W +  +PQ++ N+K K    L+  F
Sbjct: 37  DLKLLGFIIGLISLALWLIPLFPQLWQNYKTKKCEGLSLAF 77


>U40412-1|AAA81395.1|  570|Caenorhabditis elegans Temporarily
           assigned gene nameprotein 257 protein.
          Length = 570

 Score = 30.3 bits (65), Expect = 2.9
 Identities = 13/44 (29%), Positives = 23/44 (52%)
 Frame = +1

Query: 586 NTSLEVISNIQHPDIVQLVPPSIEIPGSNEPNKTVVISYDICAY 717
           +  ++++  +QH +I+QL   S E   SN   K   IS + C +
Sbjct: 81  DNEIDMMKKLQHENIIQLFDASAESRSSNRSVKEYKISMEYCKF 124


>Z70271-7|CAJ80829.1|  559|Caenorhabditis elegans Hypothetical
           protein W08D2.3b protein.
          Length = 559

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = +1

Query: 427 ISSHRIRFCLVVMIILGIPSAHSQLDKMYVEVTDLNLLV 543
           I+ + +   ++V+I++ I S H+Q+++M    + LNL V
Sbjct: 442 IAFNFVAIVILVIILVSILSLHAQIERMQASQSGLNLFV 480


>Z70271-6|CAA94232.1|  562|Caenorhabditis elegans Hypothetical
           protein W08D2.3a protein.
          Length = 562

 Score = 28.7 bits (61), Expect = 9.0
 Identities = 12/39 (30%), Positives = 25/39 (64%)
 Frame = +1

Query: 427 ISSHRIRFCLVVMIILGIPSAHSQLDKMYVEVTDLNLLV 543
           I+ + +   ++V+I++ I S H+Q+++M    + LNL V
Sbjct: 445 IAFNFVAIVILVIILVSILSLHAQIERMQASQSGLNLFV 483


  Database: celegans
    Posted date:  Oct 23, 2007  1:18 PM
  Number of letters in database: 12,740,198
  Number of sequences in database:  27,780
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 26,542,690
Number of Sequences: 27780
Number of extensions: 585935
Number of successful extensions: 1660
Number of sequences better than 10.0: 6
Number of HSP's better than 10.0 without gapping: 1544
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 1650
length of database: 12,740,198
effective HSP length: 83
effective length of database: 10,434,458
effective search space used: 3432936682
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)