Bombyx BLAST Result against bee

BLASTX 2.2.12 [Aug-07-2005]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= fdpeP18_F_P22
         (1240 letters)

Database: bee 
           438 sequences; 146,343 total letters

Searching......................................................done

                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic ac...    23   5.5  
AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecul...    23   7.3  
AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member A...    23   7.3  
AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine rece...    22   9.6  
AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.        22   9.6  
AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein...    22   9.6  
AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein...    22   9.6  

>AY500239-1|AAR92109.1|  555|Apis mellifera neuronal nicotinic
           acetylcholine receptoralpha7-1 protein.
          Length = 555

 Score = 23.0 bits (47), Expect = 5.5
 Identities = 9/20 (45%), Positives = 11/20 (55%), Gaps = 2/20 (10%)
 Frame = -2

Query: 291 HCHFHTSPCHMHLFSA--HH 238
           H H H +P H H  +A  HH
Sbjct: 423 HSHIHATPHHHHSHAATPHH 442


>AB269871-1|BAF03050.1| 1923|Apis mellifera cell adhesion molecule
            AbsCAM-Ig7B protein.
          Length = 1923

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 601  VISNIQHPDIVQLVPPSIEIPGSNEPNKTVV 693
            V++N+Q   + QL   +  + GSN+   T V
Sbjct: 1558 VVTNLQPSSVYQLKVETHNVAGSNQAEFTFV 1588


>AB257298-1|BAE93381.1| 1919|Apis mellifera Dscam family member
            AbsCAM-Ig7A protein.
          Length = 1919

 Score = 22.6 bits (46), Expect = 7.3
 Identities = 10/31 (32%), Positives = 17/31 (54%)
 Frame = +1

Query: 601  VISNIQHPDIVQLVPPSIEIPGSNEPNKTVV 693
            V++N+Q   + QL   +  + GSN+   T V
Sbjct: 1554 VVTNLQPSSVYQLKVETHNVAGSNQAEFTFV 1584


>AY921573-1|AAX62923.1|  694|Apis mellifera D2-like dopamine
           receptor protein.
          Length = 694

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 16/49 (32%), Positives = 21/49 (42%)
 Frame = -3

Query: 779 KLTKPGGVTLNVTSECPGLFPYAHISYDITTVLLGSFEPGISIDGGTSW 633
           K TK   + L V   C   F   +I   I T L    +PG++    TSW
Sbjct: 616 KATKTLAIVLGVFLICWLPFFTCNIMDAICTKLTADCQPGVTAFIVTSW 664


>AY703685-1|AAU12681.1|  200|Apis mellifera abdominal-A protein.
          Length = 200

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 13/38 (34%), Positives = 18/38 (47%), Gaps = 2/38 (5%)
 Frame = -2

Query: 405 PQYCTAFRHRDLFTPLSP--ISSFTLHPCLLRSTSSPS 298
           P+Y   F H+ LF+  +P  I + T  P      SS S
Sbjct: 7   PKYHQQFHHQQLFSSANPGTIQACTTSPATASLESSLS 44


>AY273778-1|AAP33487.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 535 LLVEETRL-LKLVQIGQYNTSLEVISNIQHPDIVQLVPPSIEIP 663
           +L  E R+  K+ Q G Y  ++  I N  +  + QLV  +  IP
Sbjct: 210 ILEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVAWAKHIP 253


>AF263459-1|AAF73057.1|  427|Apis mellifera ultraspiracle protein
           protein.
          Length = 427

 Score = 22.2 bits (45), Expect = 9.6
 Identities = 14/44 (31%), Positives = 22/44 (50%), Gaps = 1/44 (2%)
 Frame = +1

Query: 535 LLVEETRL-LKLVQIGQYNTSLEVISNIQHPDIVQLVPPSIEIP 663
           +L  E R+  K+ Q G Y  ++  I N  +  + QLV  +  IP
Sbjct: 210 ILEAEKRVECKMEQQGNYENAVSHICNATNKQLFQLVAWAKHIP 253


  Database: bee
    Posted date:  Oct 23, 2007  1:17 PM
  Number of letters in database: 146,343
  Number of sequences in database:  438
  
Lambda     K      H
   0.318    0.134    0.401 

Gapped
Lambda     K      H
   0.279   0.0580    0.190 


Matrix: BLOSUM62
Gap Penalties: Existence: 9, Extension: 2
Number of Hits to DB: 335,454
Number of Sequences: 438
Number of extensions: 8180
Number of successful extensions: 17
Number of sequences better than 10.0: 7
Number of HSP's better than 10.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 0
Number of HSP's gapped (non-prelim): 17
length of database: 146,343
effective HSP length: 60
effective length of database: 120,063
effective search space used: 42262176
frameshift window, decay const: 40,  0.1
T: 12
A: 40
X1: 16 ( 7.3 bits)
X2: 37 (14.9 bits)
X3: 62 (25.0 bits)
S1: 41 (21.7 bits)